Priestia flexa: BC359_00340
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Entry
BC359_00340 CDS
T04803
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfx
Priestia flexa
Pathway
bfx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BC359_00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfx03021
]
BC359_00340
03400 DNA repair and recombination proteins [BR:
bfx03400
]
BC359_00340
Enzymes [BR:
bfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BC359_00340
Transcription machinery [BR:
bfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BC359_00340
DNA repair and recombination proteins [BR:
bfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BC359_00340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AQX52907
LinkDB
All DBs
Position
complement(49741..53334)
Genome browser
AA seq
1197 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDAGDTPLEKKQLLSEKEYRAYREKYGKTFHAAMGAEAVKKLLQ
DIDLDKEVDALKEELKTAQGQRRTRAIKRLEVLEAFRHSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREDAVGEGMVFKDTNEALLAYQNGYVHLHTRVGVY
AGSLNNQTFTEAQNQQLLVTTVGKLVFNEILPESFPYINEPTRENLEVKTPDKYFVEKGA
DVKEFIKNQPAIAPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLGEKEVILQEAQAKVDNVLKQFRRGLITEDERYDRVISIWSSAKDVIQGKLMESL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGILAVAIKEGTEEIEKLD
ERLIGRYARKTVVHPETNEVLVAENELITEDLAEEIVNAGVEEVWIRSAFTCNTRHGVCK
KCYGRNLATGSEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIEGTVTSITEGRDRQHEITVQGDIETRSYTAPYSARLKVAEGQEIAR
GQELTEGSIDPKELLKVKDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
MDSGDTDVLPGSLLDIHQFTDANEKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRNAEPVKNQVEEPVTID
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaattggtctagcttcgccagataaaatt
cgctcttggtcatacggtgaggtaaaaaaaccggaaacgatcaactatcgtacattaaaa
cctgaaaaagatggtttgttttgtgagcgcatctttggtccacaaaaggactgggagtgc
cactgtggtaaatacaaacgcgttcgttacaaaggcgtagtatgtgaccgctgtggagta
gaagtaacaagagcaaaagtacgtcgtgaacgtatgggacatattgaactagctgcacct
gtttcacatatttggtacttcaaaggtatccctagccgcatgggacttgtcttagacatg
tcccctcgtgcgctagaggaaattatctattttgcttcatatgttgtaacagatgctggt
gatacaccgcttgaaaagaaacagctattatctgaaaaagaatatcgtgcatatcgtgaa
aagtatggaaaaaccttccatgcagcgatgggtgcggaagctgttaagaaattattacaa
gacatcgatcttgacaaagaagtagatgctctaaaagaagagcttaaaactgctcaaggt
caacgtcgtacacgtgcaattaagcgtttagaagtgttggaagctttccgtcactctggt
aatgagccttcttggatgatcttagatgttttaccggttatcccaccggaacttcgtcca
atggttcaattagatggtggacgttttgcaacttctgacctaaatgatttatatcgtcgt
gtaattaaccgtaacaaccgcttaaaacgtttactagatcttggagctcctagcattatc
gttcaaaacgaaaagcgtatgcttcaagaagctgtagatgctttaatcgataacggtcgt
cgtgggcgccctgtaacaggtcctggtaaccgtccgttaaaatctctttcacatatgtta
aaaggtaagcaaggacgcttccgtcaaaacttactgggtaaacgtgttgactactctggg
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccaatgtggtttaccaaaagaa
atggcgttagaactatttaagccgtttgttatgaaagagttagttgagcgtggtttagct
cataacatcaagagtgcgaaacgtaaaatcgagcgcgttcaacctgaagtatgggacgta
ttagaatcggttattaaagagcatccagttctgttaaaccgtgcacctacacttcacaga
cttggtatccaagcgtttgaacctacattagtagaaggtcgtgcaatccgtctacatcca
cttgtatgtacagcatacaatgcggactttgatggtgaccaaatggccgttcacgtaccg
ttatctgcagaagcacaagcagaagcgcgcatcttaatgttagcagcgcaaaacatcctg
aatccaaaagatggtaaaccagttgttacaccatctcaagatatggtattaggtaactac
tacttaacacttgagcgtgaagacgcagtgggtgaaggtatggtatttaaagatacaaat
gaggcgttgctggcataccaaaacggatatgtacatttacatactcgtgttggtgtatac
gctggttctttaaataaccaaacatttactgaagcacaaaatcaacaattgttagtgacg
actgtaggtaagcttgtatttaacgaaatcttaccggaatcattcccgtatattaacgaa
ccaacaagagaaaaccttgaagttaagacaccggataaatactttgttgaaaaaggtgct
gacgtaaaagaattcattaaaaatcaacctgcaattgcaccatttaagaaaaaaatctta
ggtaatatcattgctgaagtattcaaacgctttaagattactgaaacgtctaaaatgctt
gatcgcatgaaagacttaggtttcaaatattctactaaagctggtattacagttggtgta
gcagatatcgttgtattaggtgaaaaagaagttatcttacaagaagcgcaagctaaagta
gataatgttctaaaacaattccgtcgtggtttaattactgaagatgagcgttatgatcgc
gtaatctcaatttggagtagtgcgaaagacgttatccaaggtaagctgatggaatcctta
gataaacgaaatccaatctttatgatgagtgactctggtgcccgtggtaacgcatctaac
ttcacgcagcttgctggtatgcgtggtctgatggctaacccgtctggacgtatcatcgag
ttaccaatcaaatcaagtttccgtgaaggtttaacagtattagaatactttatctctact
cacggtgcgcgtaaaggtcttgctgatacagcccttaaaacagctgactcaggttatctt
actcgccgtcttgttgatgtggctcaagatgttatcgttcgtgatgatgattgcggtaca
gaccgaggaatcttggctgttgcaatcaaagaaggcacggaggaaatcgaaaagctggat
gagcgtctaattggacgttatgcacgtaaaactgttgttcatccagaaacaaacgaagta
cttgtagcagaaaatgaattaattacagaagatctagctgaagaaattgtaaatgctggt
gttgaagaagtatggattcgttctgcgtttacttgtaacactcgtcatggagtatgtaaa
aaatgttacggacgtaacttggcaactggttcagaagttgaagttggtgaagcagttggt
attatcgctgctcaatcaatcggtgagccaggtacacagttaacgatgcgtacattccat
actggtggggttgccggagatgacatcactcaaggtttacctcgtatccaagagatcttt
gaagctcgtaaccctaaaggccaagctgttatttcagaaatcgaaggtaccgttacttca
attactgaaggacgtgaccgtcagcatgaaattacagttcaaggtgacattgaaacacgc
tcttacacagctccttacagtgcacgcttgaaggtagctgaaggccaagagattgctcgt
ggtcaagagttaacagaaggttcaattgatccgaaagagttattaaaagtaaaagatatc
actgctgttcaagaatacctgctacgtgaagtacaaaaagtataccgtatgcaaggggta
gaaattggtgataagcacgttgaagtaatggtacgccaaatgcttcgtaaagtgagagta
atggattctggagatacagatgtattaccaggttcactattagatattcaccaattcact
gatgctaacgaaaaagtgttactagagggcaatcgtccagctactggtcgacctgtacta
cttggtatcacaaaagcatctcttgaaacggattccttcttatcagcagcatcattccaa
gaaactactcgtgttcttacagatgcagctattaaaggaaaacgtgatgaactattaggt
cttaaagagaacgttattattggtaaacttgttcctgctggtactggtatgaatagatat
cgtaatgctgaaccagttaaaaatcaggttgaagagccagtaacaatcgattaa
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integrated database retrieval system
