Priestia flexa: BC359_05945
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Entry
BC359_05945 CDS
T04803
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfx
Priestia flexa
Pathway
bfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC359_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfx03019
]
BC359_05945
03400 DNA repair and recombination proteins [BR:
bfx03400
]
BC359_05945
Enzymes [BR:
bfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC359_05945
Messenger RNA biogenesis [BR:
bfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC359_05945
DNA repair and recombination proteins [BR:
bfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC359_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Rhodanese
HEM4
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AQX53885
LinkDB
All DBs
Position
1151586..1153103
Genome browser
AA seq
505 aa
AA seq
DB search
MQLEQVLQKEFGFSTFRNGQKEIITDLLNNNHVLAVLPTGTGKSLCYQLPGYFLKRPILI
VSPLLSLMEDQVQQLKAKGEKRVIALNSFLREDEKRQALRSLNSYRFIYASPEILQNPYV
VQALKQANIGMFVVDEAHCISQWGHDFRLDYLNLGMVWENLGKPTCLALTGTATSEVLSD
IKTYLHLDQVNEHLYSMNRSNIAISVEHVHGLEEKKKKLLEYVTKIQKPGIIYCSSRALT
ESLTHYLKENGVEKVQYYHGGMEANDRMLIQRQFLENQLDFICCTSAFGMGVNKSNVRFV
LHFQTPTQLESYVQEIGRGGRDGLPSLAILLYSEEDDGSAQALLDLELPSPDTLLYCLSQ
IRSSSSPVGVREVEAHFLFTIGVYETHWRFIRHYLENIGAIHDGIIYPEQVTESLYGELV
EIVNKRLNAKQKKYHAMKGFIHTKECRRKALMRYFEEEGISERHNCCDLCSIDLDEFKQS
EHERTESTFLGWQAELARLLKQDVH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagttagaacaggtacttcaaaaggaattcggcttttctacttttcggaacggtcaa
aaagaaattataacggacttattaaataacaatcatgttttggccgtcttgcctacggga
acaggaaagtcactttgttaccagctccctggctattttttaaagcggccaatccttatc
gtgtccccgttgctttccttaatggaagatcaggttcagcagctcaaagccaagggagaa
aaacgagttattgctcttaacagttttttacgtgaagatgaaaagcggcaggcgcttcgt
tccttaaatagctatcgtttcatttatgcttctcctgaaatcttacagaatccgtatgta
gttcaggctctcaaacaagcaaatattggtatgttcgttgtagatgaagcacactgtatt
tcgcaatggggccatgactttcggttagattatttaaacttaggcatggtatgggaaaac
ctagggaaaccgacttgcttagcgctaacaggtacagcaacgagtgaagtgctcagtgat
attaaaacttatctacaccttgatcaagtcaacgagcatttatattcaatgaatcgttca
aatattgctatcagcgtagagcatgtgcatggtcttgaagaaaaaaagaaaaagctactg
gaatacgtaacgaaaattcaaaaaccaggcattatttattgctctagccgagcgttaacg
gagtcgttaacgcactacttaaaagaaaacggtgtcgaaaaagtccaatattaccatgga
ggaatggaagctaacgatcgcatgctcattcagcgacaatttcttgaaaatcagctcgac
ttcatctgctgtacaagtgcttttggaatgggagttaacaaatcgaacgttcgttttgtc
ctgcattttcaaacgcctacgcagcttgaatcctatgttcaggaaattggaagaggaggc
cgtgatggcttaccgagcttagcaattttattatatagtgaagaagatgatgggtctgca
caggctttgttagacttagagcttccttctccagatacgcttttatattgtttgtcacaa
attcgttcaagctccagtccagttggagttcgagaagttgaagcccactttttatttaca
attggtgtttatgagacgcattggcgttttattcgccactatttagaaaacattggtgcg
attcatgatggaataatttatccagaacaggttacggaatctctatatggagaactggtg
gagattgtaaataaacgcctaaacgctaagcagaaaaaataccatgcaatgaaagggttt
atccatacaaaagaatgtagaagaaaagccttaatgagatattttgaagaagagggcatt
tcagagaggcacaattgttgtgatctttgcagcattgatttagatgaatttaagcaatcc
gaacatgagcgtacagaatctacatttttaggatggcaagccgaactagcgagattgctc
aaacaagacgttcactag
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