Priestia flexa: BC359_07190
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Entry
BC359_07190 CDS
T04803
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bfx
Priestia flexa
Pathway
bfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC359_07190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfx03019
]
BC359_07190
Messenger RNA biogenesis [BR:
bfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BC359_07190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF2844
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AQX54117
LinkDB
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Position
1401373..1402932
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AA seq
519 aa
AA seq
DB search
MDIITIIFALLGLIVGAVVGFFVCKSIAEAKVAGAKSNAEQIIDDATREAEALKKEALLE
AKDEIHQLRTEAELDIRDRRAELQKQENRLMQKEENLDRKDESLDKREAALEKKDNSLTV
KQQHIEEMESKVEELVKAGQAELERISGLTRDDARAIILDRVENELSHDVAMMVKETENR
AKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIRE
VGEQTTFEVGVHGLHPDLMKILGRLKFRTSYGQNVLKHSMEVAHLAGLMASELGEDATLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINAIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDTIGD
LEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatataattacaatcatcttcgctttgcttggcctaatcgtcggtgcagttgttggc
ttttttgtttgtaaatcgattgctgaagctaaggttgcgggagcaaagtcaaatgcagaa
caaattatcgatgatgcaacccgtgaggcggaagctttgaaaaaggaagctttattagaa
gcgaaagatgaaatccatcagcttcgtacagaggcagaactagatattcgtgatcgtcga
gcagaacttcaaaaacaagaaaatcgattaatgcaaaaagaggaaaatcttgatcgaaaa
gacgagtcacttgataaacgtgaagcggcacttgaaaagaaagataattctcttaccgtt
aaacaacagcatattgaagagatggaaagcaaagttgaagaattagtcaaggctggtcaa
gcggaattagaacgcatttcaggcttaacgagagacgatgcacgagcgattattttagat
cgtgttgaaaatgaactttcccatgatgttgcgatgatggtgaaagaaacagaaaatcgt
gccaaagaagaagccgataaaaaggctaaagaaattctttcgcttgcgattcaacgttgt
gcagcggatcacgtagctgaaacaacggtttcagttgttaacttaccaaacgatgagatg
aaaggtcgaatcattggtcgagaaggtcgaaacattcgtacattagaaacattaacaggt
attgatcttattattgatgatacaccagaagcagttattttatcaggttttgaccctatc
cgccgtgaaacggcacgtatcgccttggacaaacttgttcaggatggacgtattcaccca
gctcgaattgaagagatggttgaaaaatctcgtcgtgaagtagatgagtatattcgtgag
gttggtgaacaaacaacgtttgaagttggagttcatggcttgcatccagacttaatgaag
atactgggccgtttgaaattcagaacgagctatggtcaaaacgtcttaaaacattcgatg
gaagttgctcatttagctggattgatggcttctgaacttggtgaagacgctacgcttgcg
aagcgtgcaggtttacttcacgatattggaaaagcaatcgaccacgaggtagaaggaagc
cacgttgaaattggcgttgagctagctacgaaatataaagagcatcctgttgttattaac
gcaattgcttcacatcatggtgacacggaaccgacgtcaattattgctgttctagttgct
gcggccgatgctttatcagctgcaagaccgggtgctagaagtgaaacgttagaaaactac
attcgtcgcttagaaaagcttgaagaaatctctgagtcttatgagggtgttgaaaaatca
tttgctattcaagcaggacgtgaagtccgcattatggttaaaccagatacgattggtgat
ttagaagcgcatcgcttagcgcgcgatattcgcaaacgcatagaagatgaactagattat
cctggtcatattaaggtaacagtaattcgagaaacacgagctgttgaatacgcgaaataa
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