Priestia flexa: BC359_14320
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Entry
BC359_14320 CDS
T04803
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bfx
Priestia flexa
Pathway
bfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC359_14320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfx03019
]
BC359_14320
Messenger RNA biogenesis [BR:
bfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BC359_14320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AQX55359
UniProt:
A0A1N6VXT5
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All DBs
Position
2789024..2790691
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AA seq
555 aa
AA seq
DB search
MKFVKNNQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNADKIRGLFVTHGHEDHIGGIPYLLRELNIPIYAGKLALGLLRNKLDEHGLLRTAQLH
EITEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPNGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKDGVLCLLSDSTNSEIPNFTMSERRVGDSIHDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVLNNRKIAVFGRSMEAAIDIGQELGYISCPKDTFIEPSQINRIPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSKTIDMLFRAGAEVIHGKL
NDIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEYRMQKMHIKLATDCGVQEENCFIMDNGE
VLALSENEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDFKI
AAGPDIISRGFVYMRESGDLINDAQSLITKHLNKVMERRTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaataatcagacggcggtattcgctctaggtggactaggtgaaatc
ggtaagaatacctatgccgtacagtttcaagatgaaattattcttatcgatgccggaatt
aagtttccagaagatgaactattaggtattgattatgtaattcctgattacagctattta
gttaaaaacgcagacaaaatccgtggacttttcgtaacacatggtcatgaggatcacatc
ggtggaattccgtatcttttacgcgaattaaacattccaatttatgctggaaagctagcg
ttaggtttactacgcaataagctggatgagcacggattacttagaactgcacagcttcat
gaaattacagaagacgacgttattaagtttcgcaagacgtcggtaacgtttttccgtaca
acacacagcattcctgattcatacggtattgttgtaaaaacaccaaatggacaaattgta
catacaggtgactttaagtttgactttacaccagttggagaaccagcgaacttaacaaag
atggctgaaatcggtaaagacggcgtactatgcctactatcagatagtacaaacagtgaa
atccctaactttacaatgtctgagcgtcgcgttggtgacagcattcatgacattttccga
aaagttgaaggacgtattattttcgcaacgtttgcatctaacattcatcgtttacagcaa
gttgttgaagctgctgtattaaacaatcgtaaaattgctgtgtttggtcgcagtatggaa
gcagcaattgatattggtcaggagcttggctatatctcttgtccaaaagatacgtttatt
gaaccatctcaaatcaatcgtattcctgctaaccgcgtaacaattttatgtacaggtagt
caaggtgaaccgatggctgctttatcacgtattgcaaacggtacacaccgtcaaattcag
attatccctggggatacagttgttttctcttcatcaccaattccaggtaacacagtaagt
gtaagcaaaacgatcgatatgttattccgtgctggtgctgaagttattcatggtaaactg
aatgacatccatacgtcaggtcacggtggacaagaagaacaaaaattaatgcttcgctta
atgaaaccaaagtactttatgccaattcatggtgagtaccgcatgcaaaagatgcatatc
aagctagcaactgactgcggtgttcaagaagaaaactgcttcattatggataacggtgaa
gtattagcactaagcgagaacgaagcatccgtagcgggtaaaatcccatctggttctgtt
tatattgacggaagcggcattggtgatattggtaatatcgtactgcgagatcgtcgtatt
ctatctgaagaaggtcttgtaatcgtcgttgttagcattaacatgaaagactttaaaatt
gcagcgggtccagatattatctcacgtggatttgtttacatgcgcgaatctggcgattta
attaacgatgcacaatcattaattacaaagcacttaaataaagtaatggagcgccgtaca
tctcagtggtctgaaattaaaaatgaaattacagacacactagctccattcctctatgaa
aaaacaaaacgtcgtccaatgattttaccaatcattatggaagtataa
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