KEGG   Priestia flexa: BC359_14320
Entry
BC359_14320       CDS       T04803                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bfx  Priestia flexa
Pathway
bfx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bfx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BC359_14320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfx03019]
    BC359_14320
Messenger RNA biogenesis [BR:bfx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BC359_14320
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: AQX55359
UniProt: A0A1N6VXT5
LinkDB
Position
2789024..2790691
AA seq 555 aa
MKFVKNNQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNADKIRGLFVTHGHEDHIGGIPYLLRELNIPIYAGKLALGLLRNKLDEHGLLRTAQLH
EITEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPNGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKDGVLCLLSDSTNSEIPNFTMSERRVGDSIHDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVLNNRKIAVFGRSMEAAIDIGQELGYISCPKDTFIEPSQINRIPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSKTIDMLFRAGAEVIHGKL
NDIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEYRMQKMHIKLATDCGVQEENCFIMDNGE
VLALSENEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDFKI
AAGPDIISRGFVYMRESGDLINDAQSLITKHLNKVMERRTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaataatcagacggcggtattcgctctaggtggactaggtgaaatc
ggtaagaatacctatgccgtacagtttcaagatgaaattattcttatcgatgccggaatt
aagtttccagaagatgaactattaggtattgattatgtaattcctgattacagctattta
gttaaaaacgcagacaaaatccgtggacttttcgtaacacatggtcatgaggatcacatc
ggtggaattccgtatcttttacgcgaattaaacattccaatttatgctggaaagctagcg
ttaggtttactacgcaataagctggatgagcacggattacttagaactgcacagcttcat
gaaattacagaagacgacgttattaagtttcgcaagacgtcggtaacgtttttccgtaca
acacacagcattcctgattcatacggtattgttgtaaaaacaccaaatggacaaattgta
catacaggtgactttaagtttgactttacaccagttggagaaccagcgaacttaacaaag
atggctgaaatcggtaaagacggcgtactatgcctactatcagatagtacaaacagtgaa
atccctaactttacaatgtctgagcgtcgcgttggtgacagcattcatgacattttccga
aaagttgaaggacgtattattttcgcaacgtttgcatctaacattcatcgtttacagcaa
gttgttgaagctgctgtattaaacaatcgtaaaattgctgtgtttggtcgcagtatggaa
gcagcaattgatattggtcaggagcttggctatatctcttgtccaaaagatacgtttatt
gaaccatctcaaatcaatcgtattcctgctaaccgcgtaacaattttatgtacaggtagt
caaggtgaaccgatggctgctttatcacgtattgcaaacggtacacaccgtcaaattcag
attatccctggggatacagttgttttctcttcatcaccaattccaggtaacacagtaagt
gtaagcaaaacgatcgatatgttattccgtgctggtgctgaagttattcatggtaaactg
aatgacatccatacgtcaggtcacggtggacaagaagaacaaaaattaatgcttcgctta
atgaaaccaaagtactttatgccaattcatggtgagtaccgcatgcaaaagatgcatatc
aagctagcaactgactgcggtgttcaagaagaaaactgcttcattatggataacggtgaa
gtattagcactaagcgagaacgaagcatccgtagcgggtaaaatcccatctggttctgtt
tatattgacggaagcggcattggtgatattggtaatatcgtactgcgagatcgtcgtatt
ctatctgaagaaggtcttgtaatcgtcgttgttagcattaacatgaaagactttaaaatt
gcagcgggtccagatattatctcacgtggatttgtttacatgcgcgaatctggcgattta
attaacgatgcacaatcattaattacaaagcacttaaataaagtaatggagcgccgtaca
tctcagtggtctgaaattaaaaatgaaattacagacacactagctccattcctctatgaa
aaaacaaaacgtcgtccaatgattttaccaatcattatggaagtataa

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