Buchananella felis: ABYF36_02690
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Entry
ABYF36_02690 CDS
T10900
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfy Buchananella felis
Pathway
bfy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABYF36_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfy03021
]
ABYF36_02690
03400 DNA repair and recombination proteins [BR:
bfy03400
]
ABYF36_02690
Enzymes [BR:
bfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABYF36_02690
Transcription machinery [BR:
bfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABYF36_02690
DNA repair and recombination proteins [BR:
bfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABYF36_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XEO17900
LinkDB
All DBs
Position
complement(663649..667515)
Genome browser
AA seq
1288 aa
AA seq
DB search
MLDANAFDKLHISLATAENIDEWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRAKVRRERMGIIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAHMVTEVDTEGRHEDMAMLTNEIEVERKRLEDKRDADIAFRMEKLEAD
LKELEEAGAKADAREKLRKAGEREMANIRRRAQDDLDFMNAVWDRFTGLKVGDLEGDERL
YREMVKRYGIYFKGAMGAQAIQRRLESFDLAAEAEELREIIATGTGQRKTRALKRLKVVN
AFLSTGNRPEVMVLDSIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRALKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVGGPTLKLHQCGLPKAMALELFKPFVMKRLVDLKYAQNVKTAKRMVERMR
SQVWDVLDEVIREHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPAQDMIIGLFHLTSDVDPELDLPE
EVPSFTSVAEAIMAFDAGRLDLNQIARIRLRGVTPPVGWQAPEGWEPGDDVVLDTTLGRC
LFNELLPADYPFVTGVVDKKALGALVNDLAERYPRVEVAEALDNLKAAGFYWATWSGISI
SFPDVVGPANKPEILAGYEERAAKVMGEFNAGLITDDERYNALVEIWTAATKEVAQAMRD
NFPARNTVFRMVTSGARGNWDQIRQIAGMRGLVSDPKQKLIERPIKSNYREGLSVLEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTRRGLLMVIAEEASEGLVR
SKTVETTAYARTLAKDALDASGAVVATAGEDVGDVLIDKLIEAGISQIHVRSVLTCESAV
GTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASDSDITQGLPR
VQELFEARTPKGEAEITEASGRVKIDDDDPAARRIIVTRDDGEEDLVIEVSRRQKLLVND
GDHVQVGDQLTEGRIDPKKMLRIKGPNATQKQLVDEVQEVYRSQGVDIHSKHIEVIVRQM
LRRVTVLDSGDTKLLPGELIEAARYREENRRVVAEGGKPASGRPELMGITKASLATDSWL
SAASFQETTKVLTEAALMGRSDPLLGLKENVILGKLIPAGTGLNRYHEIDVAPTEEAMAS
FYNRQNFVNYDASSLEDDTFYGGDFSFR
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgctaacgccttcgacaagctccacatcagcctggccacggctgagaacatc
gacgaatggtcctacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
ccggagaaggacggcctgttctgcgagaagatctttggccccacccgtgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgctacaagggcatcgtttgcgagcgctgcggcgtg
gaggttacccgcgccaaggtgcgtcgcgagcgcatgggcatcatcaagctggccgccccg
gtcacgcacatctggtacttcaagggcgtgccctcccgcctgggctacctgctgaacctg
gcgcccaaggacctggagaaggtcatctacttcgccgcccacatggtcaccgaggtcgac
accgagggccgccacgaggacatggcgatgctgaccaacgagatcgaggtcgagcgcaag
cgcctggaggacaagcgcgacgccgacatcgccttccgcatggagaagctcgaggccgac
ctgaaggagctggaggaggccggcgccaaggccgacgcccgcgagaagctccgcaaggcc
ggcgagcgcgagatggccaacatccgccgccgcgcccaggacgacctggacttcatgaac
gccgtgtgggaccgcttcaccggcctgaaggtgggcgacctggagggcgacgagcgcctc
taccgcgagatggtcaagcgctacggcatctacttcaagggcgccatgggcgcgcaggcc
atccagcgccgcctggagtccttcgacctggccgccgaggccgaggagctgcgcgagatc
atcgccaccggcaccggtcagcgcaagacccgcgccctgaagcgcctgaaggtggtcaac
gccttcctctccacgggcaaccgccccgaggtgatggtgctggactccatcccggtcatc
ccgccggacctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctctaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgcctgctggacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtggacgcg
ctgttcgacaacggccgtcgtggccgcccggtcaccggcccgggcaaccgcgccctgaag
tccattagcgacatgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgttgactactcgggtcgttccgtgatcgtgggtggccccaccctgaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagcccttcgtgatgaagcgcctg
gtggacctgaagtacgcccagaacgtcaagaccgccaagcgcatggtcgagcgcatgcgc
tcccaggtgtgggacgtgctggacgaggtcatccgcgagcacccggtgctgctcaaccgc
gcccccacgctgcaccgcctgggcatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctcgtgtgtgccgccttcaacgccgacttcgacggtgaccag
atggcggttcacctgccgctgtccgccgaggcgcaggcggaggcccgcatcctgatgctg
tcctccaacaacatcctcaagccctccgacggtcgccccgtgaccatgcccgcccaggac
atgatcattggtctgttccacctcacctccgacgtggacccggagctggacctgccagag
gaggtgccgtccttcacctcggtggcggaggcgatcatggcgttcgacgccggccgcctg
gacctgaaccagatcgcgcgcatccgcctgcgcggcgtcaccccgccggtgggctggcag
gcccccgagggctgggagccgggcgacgacgtcgtgctggacaccaccctgggccgctgc
ctcttcaacgagctgctgccggcggactacccgttcgtcaccggcgtggtggacaagaag
gccctgggcgccctggtcaacgacctcgccgagcgctacccgcgcgtcgaggtggccgag
gccctggacaacctgaaggccgccggcttctactgggccacctggtccggcatctccatc
tccttcccggacgtggtgggcccggccaacaagccggagatcctggccggatacgaggag
cgcgccgccaaggtgatgggcgagttcaacgccggtctgatcaccgacgacgagcgctac
aacgccctggtggagatctggaccgccgcgaccaaggaagttgcgcaggctatgcgcgac
aacttcccggcccgcaacacggtcttccgcatggtcacctccggtgcccgtggtaactgg
gaccagatccgccagatcgccggtatgcgtggcctggtgtctgacccgaagcagaagctc
atcgagcgcccgatcaagtccaactaccgcgagggcttgtccgtgctggagtacttcatc
gctacccacggtgcccgtaagggtctggccgacaccgctctgcgtaccgccgactccggt
tacctcacccgtcgtctggtggacgtctcccaggacgtgatcgtgcgcgaggaggactgt
ggcacccgccgcggcctgctcatggtgatcgccgaggaggccagcgagggcctggtgcgc
tccaagactgtggagaccaccgcctacgcccgcaccctggccaaggatgcgctggacgcc
tccggtgccgtggtcgccacggccggcgaggacgtcggcgacgtgctgatcgacaagctg
atcgaggccggcatctcccagattcatgtgcgctccgtgctcacctgtgagtccgctgtc
ggcacctgcgccgcctgctacggccgctcgctggccaccggtaagcgcgtggacatcggt
gaggccgtcggcatcatcgccgcgcagtccatcggcgagcccggtacccagctgacgatg
cgtaccttccacaccggtggtgccgcctccgactctgacatcacgcagggtctgccgcgt
gtccaggagctcttcgaggcccgcaccccgaagggtgaagcggagatcaccgaggcctcc
ggccgcgtcaagatcgacgacgacgacccggccgcgcgccgcatcatcgtcacccgcgac
gacggcgaagaggacctggtcatcgaggtctcccgccgccagaagctgctggtgaacgac
ggcgaccacgtccaggtgggcgaccagctcaccgagggccgcatcgacccgaagaagatg
ctgcgcatcaagggccccaacgccacccagaagcagctggtggacgaggtgcaggaggtc
taccgctcccagggcgtggacatccactccaagcacatcgaggtgatcgtgcgccagatg
ctgcgccgcgtcaccgtgctggactccggcgacaccaagctgctgcccggtgagctcatc
gaggcggcccgctaccgcgaggagaaccgccgcgtcgtggccgagggcggcaagcccgcc
tccggccgtcccgagctgatgggtatcaccaaggcctcgctggcgaccgactcgtggctg
tccgccgcgtccttccaggagaccaccaaggtcctgacggaggccgcgctgatgggccgc
tccgacccgctgctgggcctgaaggagaatgtcatcctcggtaagctgatcccggccggt
accggtctgaaccgctaccacgagatcgacgtcgcccccaccgaggaggccatggcgtcc
ttctacaaccgccagaacttcgtgaactacgacgcctcctccctggaggacgacacgttc
tacggtggtgacttctccttccgctga
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