Buchananella felis: ABYF36_03875
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Entry
ABYF36_03875 CDS
T10900
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfy Buchananella felis
Brite
KEGG Orthology (KO) [BR:
bfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfy03032
]
ABYF36_03875 (topA)
03400 DNA repair and recombination proteins [BR:
bfy03400
]
ABYF36_03875 (topA)
Enzymes [BR:
bfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABYF36_03875 (topA)
DNA replication proteins [BR:
bfy03032
]
Prokaryotic type
DNA Topoisomerases
ABYF36_03875 (topA)
DNA repair and recombination proteins [BR:
bfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABYF36_03875 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XEO18113
LinkDB
All DBs
Position
complement(995871..998690)
Genome browser
AA seq
939 aa
AA seq
DB search
MKLVIVESPAKAKRIGAFLGDDYVVEASIGHIRDLPQPRDLPETLKKSGYAKFAVDVDND
FEPYYVVDADKKKKVAELKRYLKDAEALYLATDEDREGEAIAWHLLEVLKPKVPVRRMVF
HEITKEAITNALDNTREVNLHLVDAQETRRILDRLVGFEVSPLLWRKVRTGLSAGRVQSV
ATRLVVERERERMAFVPAGYHSVTADLATAAGEVFAARLVSVDGVNVATGRDFGDDGQLK
SAAQKAGVFALGEADAAALAASLGGASALVADVASKPYTRRPAAPFTTSTLQQEASRKLR
MSSRDAMRTAQSLYENGYITYMRTDSTALSGEALRAARAQAVELYGEQSIPASPRVYATK
AKGAQEAHEAIRPAGNNFRTPTEVRGQLNASEFALYELIWKRTIASQMVDAKGFTSTVEL
TAPGTDAAGAGRQLKLSAAGTVITQRGFLAAYEEGRDAERYKEADEERLPELAAGQELDV
AGAHQKGHQTSAPPRYTEASLVKAMEANGIGRPSTYAATISVITDRGYVERRGQALVPTW
LAFSVVRLLEDNLAELVDYDFTASMESDLDRIAAGDAERVAWLRRFFFGSGEGEGLRAVG
LRTAVESLGDIDARAVNSIEVGGGVNVRVGRYGPYLEDAEGRRAPLPSDVAPDELTAQKV
AELFERASDDGRELGIDPVTGHVIIAKDGRYGPYVTEVLPEEGQAEGAAKEAASATGATK
TGARRKAAAKPRTASLLKSMDLATVTLGDALKLLSLPRVVGVDTDGVEITAQNGRFGPYL
KKGTDSRSLATEEEMFTITLEQASAIYAQPKTRGVRGAAKPPLREFGEDPVSGKKVTVKE
GRFGPYITDGTTNVTVPRGEDPAELTQERAFELLQIKREKGPAKKAPAKKTTAKKTTTKT
AAKKPAAKATSAKSAATKSTAAKAPARKTATKEAVDAAE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcatcgtggagtcgcccgccaaggccaagcgcatcggcgcgttcctgggt
gatgactacgtggtggaggcctcgatcggtcacatccgtgacctgccccagccccgcgac
ctgcccgagaccctgaagaagtccggctacgccaagttcgccgtggacgtggacaacgac
ttcgagccctattacgtggtggacgcggacaagaagaagaaggtggcggagctcaagcgc
tacctgaaggacgccgaggcgctctacctggccactgatgaggaccgcgagggggaggcg
atcgcctggcacctactggaggtgctcaagcccaaggtgccggtgcggcgcatggtgttc
cacgagatcaccaaggaggcaatcaccaacgcgctggacaacacgcgcgaggtgaacctg
cacctggtggacgcgcaggagacgcgccgaatcctggaccgcctggtcggcttcgaggtc
tccccgctgctgtggcgcaaggtgcgcaccggcctgagcgccgggcgcgtgcagtccgtg
gccacccgcctggtggtggagcgcgagcgtgagcgcatggcgttcgtcccggccggctat
cactccgtcaccgcagacctggccaccgccgccggggaggtctttgccgcccgcctggtg
agcgtggacggcgtgaacgttgccaccggtcgcgatttcggggacgacggccagttgaag
agcgccgcccagaaggccggcgtgtttgcgctcggggaggccgacgctgccgccctggcc
gcctcccttggtggggcgagcgcgctggtggccgacgttgcctccaagccctacacgcgc
cgcccggccgccccctttactacctccacgctgcagcaggaggcctcccgcaagctgcgc
atgagctcgcgcgacgcgatgcgcacggcccagtccctgtacgagaacggttacatcacc
tacatgcgtaccgactccacggccctgtccggggaggcgctgcgggcggcgcgcgcccag
gccgtggagctgtacggcgagcagagcattccggcctcgccgcgcgtgtacgccactaag
gcgaagggcgcgcaggaggcgcacgaggctatccgcccggcgggcaacaacttccgcacc
cccaccgaggtgcgggggcagctgaatgccagcgagttcgcgctctacgagctgatctgg
aagcgcaccattgcctcccagatggtggacgccaagggcttcacctccacggtggagctg
accgcgcccggcaccgacgcggccggggcggggcgccagttgaagctgagtgctgccggc
acggtcatcacccagcgcggcttcctggccgcctacgaggagggccgggacgccgaacgc
tacaaggaggccgacgaggagcgcctgccggagctcgctgccggccaggagctggacgtt
gccggtgcacaccagaagggccaccagacctccgcgccgccgcgctacaccgaggccagc
ctggtcaaggccatggaggccaacgggatcggccgcccctccacctacgccgccaccatc
tccgtgatcaccgaccgtggctacgtggagcggcgcgggcaggcgctggtgcccacgtgg
ctggctttctccgtggtgcgcctgctggaggacaacctggcggagctggtggactacgac
ttcaccgcctccatggagagcgacctggaccgcatcgccgccggtgacgccgagcgcgtg
gcctggctgcgccgcttcttctttggctccggcgagggcgaggggctgcgggccgttggg
ctgcgcaccgccgtggagtccctgggggacatcgacgcgcgcgccgtgaactccattgag
gtgggcggcggcgtgaacgtgcgcgtgggccgctacggcccctacctggaggacgccgag
ggccgccgcgccccgctgcccagcgacgtcgcccccgacgagctcaccgcccagaaggtg
gccgagctcttcgagcgggccagcgacgacggccgcgagctcggcatcgaccccgtcacc
ggccacgtcatcatcgccaaggacggccgctacggcccctacgtcaccgaggtcctaccg
gaggaaggccaagcggagggggcggctaaggaggcagcgtcggccaccggcgccaccaag
acgggcgcccgcaggaaggcggccgccaagccgcgcaccgcctccctgctcaagagcatg
gacctggccaccgtcacgctgggcgacgcactcaaactgctgtcgctgccgcgcgtggtg
ggcgtggacaccgacggcgtggagatcactgcgcagaacggtcgctttgggccctacctg
aagaagggcacggactcgcgctcgctggccaccgaagaggagatgttcaccatcaccctg
gagcaggccagcgccatctacgcccagcccaagacgcgcggggtgcgcggggccgccaag
ccgccgctgcgcgagttcggcgaggacccggtcagcggcaagaaggtcaccgtcaaggag
ggccgctttgggccctacatcaccgacggcaccaccaacgtcaccgtgccgcgcggggag
gacccggcggagctgacgcaggagcgcgccttcgaactgctgcagatcaagcgggaaaag
ggcccggccaagaaggcccccgccaagaagacgaccgcaaagaagacgacgaccaagacg
gcggcgaagaagcccgctgcgaaggcgacgtcggccaagagcgcagctaccaagagcacg
gcggccaaggcgccggctaggaagaccgcgaccaaggaggcggtcgacgcggcagagtag
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