Buchananella felis: ABYF36_04790
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Entry
ABYF36_04790 CDS
T10900
Name
(GenBank) DUF3418 domain-containing protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bfy Buchananella felis
Brite
Enzymes [BR:
bfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABYF36_04790
Messenger RNA biogenesis [BR:
bfy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABYF36_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XEO16585
LinkDB
All DBs
Position
complement(1229534..1234714)
Genome browser
AA seq
1726 aa
AA seq
DB search
MNAGSRAGRADSQRGFSPQQIEQRRAAVPTLTYPDLPVSARREEILAAIRDHQVVVVAGA
TGSGKTTQLPKMCLELGRGVTGLIGHTQPRRIAARSVAERLAFELGVEVGGAVGYQVRFT
DETAPTTLVKLMTDGILLAEVQRDPLLRRYDTVIVDEAHERSLNIDFILGYLARLLPLRP
DLKVVITSATIDSARFAAHFERFAATPVPIIEVSGRTFPVEIRYRPLVPQRELEGDDAAA
GRPQEVGAATPAAADTRAAAADTRPARAAASPASKAPTGPAGMVNATASSAGTGVGVTGK
DGAAAPTRADLEAAAFAAALRASAARGPGVVQLPELAAPAPAPQPDEPGASQARPLPAQP
AAAPAAPEPTRQSCAPQPPEQPLDLLFEGDERFPSEEMDQVSGICTAVDELLAESAALPA
DGSGRDILVFLAGERDIRDTHAALIEHLGSRYVADPKARGHRPDGVEILPLFARLTTAEQ
HRVFEPHSLQRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPVSRAS
SDQRAGRCGRVAEGIAIRLFSKADLASRDEFTEPEILRTSLASVILQMTALGLGRVEDFP
FVDPPEARAVRDGVTLLAEIGAVRQENGDIALTAIGRRLASLPIDPRLARMLIAADEAGC
AAEVLVIVAALSMQDVRERPADKAAAADAAHRRFAHPTSDFLTYITLWRYIRTQRRELSG
SAFRRMCRAEFLHYLRVREWQDLVTQLRQLARPLGLKLSPIALPDTEDLVAAALTEGGAA
LSGGAGTSGAVAAACVAFASSGRGADEAAVHRSLLTGLLSNVGTWDERKKEYAGTRGTRF
TIWPGSGLVKARRTPAWVMTAELVETSRLFARTVARIEPGWVEELAGHLVARSYNEPHWS
RRNGAAMINEKVQLYGLTLVAAREVLLGRLGETPIGDVTARELAREMFIRHALVEGDWHG
RHAFVKENERRVAAAHEVERRTRTHALVADAEARAAFFAARLPAHVTGAAAFDKWWKRAR
TTEPDLLTYPEELLRPRGAGVEGYPDFWQQGDMRLELRYEFTPGRSDDGVTAVIPVDLLA
AVRPDGFDWMVPGVLDELVLATLRALPKAVRRQLVPAPDVAKEVVEVLRAAHPVLVGDDV
AAGRSEDAPAPSGGAGKAGAGPKSATAAGDAETSDGPTSDRGADASTTGGGAGPEGASAA
KALPRTLVPGASMRDAWALLRAQAEEREAARVAARAGVRPDAASPRGTGADGAPDRSFRT
AFTRAVEAARGVVIPVEAWQGVELPDHLRMTFRVVSARGAVLGEGKDLGELQRELEPAAT
DAVRGVVRGAVALALDEARSAQQSQRRGKGKKAGTEPQPGTAQAGDAPGAKRGQAAGSGG
PSPAAATRGGARAQAGAGGNVGHLNAPADPGGGALSAVQAAAMEASDLKDFPAQPLPDHV
EVSAASGIVRAYPALVAPEPAQPRADLKLLPTAAGAARAHLLGVRALLLQKVALSEARVT
SRWTGAEALTLAASPYPSTSALVADAQWAAAGLVLAEWGRASGQSQAVRHPTQFVALLAY
ARQHFEDAVYRVLRWCAAALTEARAVDKALSKGTTLALVGVAAQVRAHLEHLLPAGFLGS
TPVTVLQHLARYVKALTRRFERAGVDAGGDQAATRVLETLERELAVAFEAARGAGSAGQE
ALGRLESVGWLLEELRVSLFAQALGTPVKVSEKRVRTALQEAAKLR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctggctcccgcgctggccgcgcggactcccagcgcggcttctccccgcagcag
atcgaacagcgccgcgcggcggtgcccaccctgacctacccagacctgccggtgagcgcc
cgccgggaggagatcctggccgccatccgcgatcaccaggtggtggtggtggccggcgcc
accggctccggtaagaccacgcagctgcccaagatgtgcctggagctggggcggggcgtc
accgggctgatcgggcacacccagccgcgccgcatcgccgcgcgctccgttgccgagcgc
ctggccttcgagctgggcgtggaggtcggtggcgcggtgggctaccaggtgcgcttcacc
gacgagaccgccccgaccaccctggtcaagctaatgacggacggcatcctgctggccgag
gtgcagcgcgaccccctgctgcgccgctacgacacggtgatcgtggacgaggcccacgag
cgcagcctcaacatcgacttcatcctgggctacctggcccgcctgctgccgctgcgcccg
gacctgaaggtggtcatcacctccgccaccatcgactccgcccgctttgccgcccacttc
gagcgcttcgcggccacgcccgtgccgatcatcgaggtcagcggccgcaccttcccggtg
gagatccgctaccggcccttggtaccgcagcgcgagctggagggggacgacgctgccgcc
ggccgcccccaggaggttggcgcagcgacgcccgccgccgcagatacccgggcggccgct
gcggatacccgcccggcccgggccgccgcctcaccggcaagcaaggccccgaccggcccc
gccggcatggtcaatgccaccgcgagcagcgccggcaccggcgtcggcgtcaccggcaag
gacggcgctgccgcgcccacccgcgccgacctggaggccgccgccttcgccgccgccctc
agggccagcgccgcgcgcgggccgggagtggtgcagctacccgagctggcagcgcccgcc
ccagcgccgcagcccgacgagcccggggccagccaggcccggccgctgccggcgcagcct
gcagcggcacccgccgcgcccgagccgacccggcaatcgtgtgcgccgcagccgcccgag
cagcccctggacctcctcttcgagggcgacgagcgcttccccagcgaggagatggaccag
gtcagcggcatctgcaccgccgtggacgagctgctggcggagtccgccgccctgcccgcc
gacggctcgggccgcgacatcctggtgttcctggccggcgagcgcgacatccgcgacacc
cacgcggcgctgatcgagcacctgggctcgcgatacgtggcggacccgaaggcgcgcggc
caccgccccgacggggtggagatcctgccgctgttcgcccgcctgaccaccgcggaacag
caccgggtcttcgaaccgcactcactgcagcgcatcgtgctggccaccaacgtcgcggag
acctcgctgaccgtccccggcatccgctacgtgatcgacccgggcctggcgcgcatctcc
cgctactccaaccgcaccaaggtgcagcgcctcccgatcgaaccggtctctagggcgtcg
tcggaccaacgcgccgggcgctgcggccgcgtggccgagggcatcgcaatccgcctgttc
tccaaggccgacctcgctagccgcgacgagttcaccgagccggagatcctgcgcacctcc
ctggccagcgtcatcctgcagatgaccgccctggggctggggcgggtggaggacttcccg
ttcgtggacccgcccgaggcgcgcgccgtgcgcgacggcgtcaccctgctggcagagatc
ggcgcggtgcggcaagagaacggggacatcgcgctcaccgccatcggccgccgcctggcc
tccctgccgatcgacccgcgcctggcccgcatgctgatcgccgccgacgaggccggttgc
gccgccgaggtgctggttatcgtggcggccctgtccatgcaggacgtccgcgagcgcccg
gcggacaaggccgccgccgcagacgccgctcaccggcgcttcgcccaccccaccagcgac
ttcctcacctacatcacgctgtggcgctacatccgcacccagcgccgcgagctgtccggc
agcgcgtttcggcgcatgtgccgcgccgagttcctgcactacctgcgcgtgcgcgagtgg
caggacctggtcacgcagctgcgccagctggcccgcccgctgggcctgaagctctccccc
atcgccctgccggacacggaggacctggtggcggccgccctcacggagggcggggctgcg
ctgagcggcggggcgggcacgtcgggcgcggtggccgccgcgtgcgtggcgttcgcctcc
tcggggcgcggcgcggacgaggccgcggtccaccgctcgctgctgaccggcctgctgtcc
aacgtgggcacctgggacgagcgcaagaaggagtacgccggcacgcgcggcacccgcttc
acgatctggcccggctccggcctggtcaaggcccggcgcaccccggcgtgggtgatgacc
gctgagctggtggagacctcccgcctgttcgcgcgcaccgtggcccgcatcgagccgggc
tgggtagaggagctggccgggcacctggtggcgcgctcctacaacgagccgcactggtcc
cgacgcaacggggccgccatgatcaacgagaaggtccagctctacgggctgaccctggtg
gccgcccgtgaggtgctgctgggccgcctgggcgagacgccgatcggggacgtcaccgcc
cgggagctggcccgcgagatgttcatccgccacgccctggtggagggcgactggcacggc
cggcacgcgttcgtgaaggagaacgagcggcgcgtggccgccgcccacgaggtcgagcgc
cgcacccgcacccacgccctggtggccgacgccgaggcccgcgccgccttcttcgccgcc
cgcctgcccgcccacgtcaccggcgccgccgccttcgacaagtggtggaagcgggcgcgc
accaccgagcccgacctcctcacctacccagaggagctgctgcgcccgcgcggcgcgggc
gtggagggctacccggacttctggcaacagggggacatgcgcctggagctgcgctacgag
ttcacgcccggccgcagcgacgacggtgtcaccgccgtcatcccagtggacctgctggcc
gccgtacgcccggacggctttgactggatggtgcccggcgtgctggacgagctggtgctt
gccaccctgcgcgccctgccgaaggccgtgcgccgccagctggtgcccgcccccgacgtg
gccaaggaggtggtggaggtgctgcgcgccgcccacccggtcttggtgggggacgacgtt
gccgccggccgcagcgaggacgcgcccgcccccagtgggggcgcggggaaggcgggggcc
gggcccaagagcgcgactgcggctggcgacgccgagacaagcgacgggccgacgagcgac
cggggtgcggacgcgtccacgacgggaggcggcgccgggcccgagggagcgagcgccgcg
aaggcgctgccgcgcacgctggtgcccggggcctccatgcgcgacgcgtgggcgctgctg
cgcgcccaggccgaggagcgcgaggcggcccgcgtggcagcgcgggccggggtgcgcccg
gacgcggccagcccccggggcactggggcagacggggcgccggaccgctccttccgcacc
gccttcacgcgcgcggtggaggccgcgcgcggcgtggtcatcccggtcgaggcctggcag
ggcgtggagctacccgaccacctgcgcatgaccttccgcgtggtcagtgcgcgcggtgcc
gtacttggagaaggaaaggacctgggcgagctgcagcgcgagctggagcccgccgccacc
gatgccgtacgcggcgtggtgcgcggcgccgtagccctggcgctggacgaggcccgctcc
gcccaacaatcccagcggcgcggcaaggggaagaaggccggcactgaaccgcagcccggc
actgcgcaggcgggcgacgctccgggcgccaagcgcgggcaggcggccgggtccggtggc
ccgtcccctgcggccgccacgcggggcggcgcgcgggcccaggcgggggcgggcgggaac
gtcggccacctgaatgcgccggcagatccgggcggtggcgcactcagcgccgtgcaggcc
gccgcgatggaggccagcgacctgaaggacttccccgcccagccgctgcccgaccacgtc
gaggtcagcgccgccagcggaatcgtgcgcgcctacccggcgctcgttgcgcccgagcct
gcgcagccccgcgccgacctgaagctgctgcccaccgccgccggcgccgcccgggcccac
ctgctcggcgtgcgcgcactgctgctgcaaaaggtggcgctcagcgaggcgcgcgtgacc
tcccgctggaccggggccgaggccctgacgctggccgccagcccctaccccagcacctcc
gcgctcgtggccgacgcgcagtgggccgccgccgggctggtgctggccgagtggggccgc
gccagcgggcagtcgcaggccgtgcgccaccccacccagttcgtggcgctgttggcctac
gcccgccagcacttcgaggacgccgtctaccgcgtgctgcgctggtgcgccgccgcgctg
accgaggcgcgcgcggtggacaaggccctctccaagggcaccacgctggccctggtgggg
gtggcggcccaggtgcgcgcgcacctggagcacctgctgccggccggcttcctgggctcg
acccccgtgaccgtgctgcagcacctggcgcgctacgtcaaggcgctgacgcgccgcttc
gagcgggccggggtggacgcgggcggcgaccaggccgccacccgcgtgttggagacactg
gagcgcgagctggcggtcgccttcgaggccgcgcgcggggcgggcagcgccgggcaggag
gcgctggggcgcctggagtccgttggctggctcctagaggagctgcgggtgagcctgttc
gcccaggctctcggcacgccggtgaaggtgagtgagaagcgggtacggacagctctgcaa
gaggcggcaaagctgcgctga
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