Bordetella flabilis: BAU07_00530
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Entry
BAU07_00530 CDS
T04592
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bfz
Bordetella flabilis
Pathway
bfz02020
Two-component system
bfz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAU07_00530
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAU07_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_00530
Transcription machinery [BR:
bfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAU07_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
FGase
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
ANN75809
UniProt:
A0A193G969
LinkDB
All DBs
Position
113571..115007
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AA seq
478 aa
AA seq
DB search
MQNIVPMTRHALELRPGQHLALTPQLQQSIRMLQLSTLDLETEISQALSDNPLLERDEDP
RGDDVDPEREGSAHDDEPAPERETGVDEMPGAKGVYSDDDSEMPEQARAETLREHLLAQL
SLTRAGQRDAALTALLIDELDENGYLASPLDEILSWLPAEIEADIDELRAALRLLQSFDP
PGVGAADMAECLDLQLRRPDVAVLPEARDPAVLACARRICAEHLPLLAGNAARLREALQC
DDAMLRGARALILKLDPRPGRKWTVPAADYAIPDVIVRKGRKGWHVVLNSAAMPRLRING
VYARMLGNQREASHAALHAQLQQARWMIRNVEQRFDTILRVAQAIVNHQAAFFSQGPSAM
RPLILKDIAGELGLHESTISRATTQKYMLTPFGTMELKDFFGAGVATDSGDAASATAVQA
FIRRLVADENRAKPLSDNQIMLKLAEQGIVIARRTVAKYREAMRIAPASVRRAQAAAR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgtacctatgactcgccacgccttagaactccggccaggacaacatctt
gccctgaccccgcaattgcagcagtccatccggatgctgcagttgtcgacgctcgacctc
gagacggagatctcacaggccttgtccgataatccgttgctcgaacgcgacgaagacccg
cgcggcgacgacgtcgatccggaacgcgagggctcagcccatgacgacgaaccggcacca
gaacgggaaaccggagtcgacgaaatgccgggcgccaagggcgtgtactcggacgacgac
agcgagatgcccgaacaggcgcgcgccgaaaccttgcgcgagcacttgctggcccaactg
tcgctgacccgcgcgggtcagcgcgatgcggcgctcaccgcgctgctgatcgacgaactg
gacgagaacggctatctggcttcgccgttggacgaaatcctgtcctggctgccggccgag
atcgaggccgacatcgacgagctgcgggccgcgctgcgcttgctgcaatccttcgacccg
ccgggcgtcggggcggccgacatggcggaatgcctggacctgcaactgcgccgtccggac
gttgccgtgcttcccgaggcccgcgatccggccgtgctcgcctgtgcgcggaggatctgc
gccgaacacctgccgctgctggccggcaatgccgcgcgcctgcgcgaagcgctgcagtgc
gacgacgccatgctgcgcggcgcgcgcgccctgatactgaaactggatccgcggcccggc
cgcaaatggacggtcccggcggcggactacgccattcccgatgtcatcgtgcgcaagggc
cgcaaaggctggcatgtggtcctgaacagcgcggcgatgccgcgcctgcgcatcaacggg
gtctatgcacgcatgctgggcaaccagcgcgaggccagccacgccgccctgcacgcccaa
ttgcagcaggcgcggtggatgatccgcaacgtggaacagcgtttcgacaccatcctgcgc
gtggcccaggccatcgtgaatcaccaggcggcgttcttcagccaggggccgtcggccatg
cggccgcttatcctcaaggacatcgccggcgagcttggcctgcacgaatccaccatctcg
cgggcgaccacccagaagtacatgctgacgccgttcggcacgatggagctgaaggatttc
ttcggcgcgggcgtcgccacggacagcggcgacgccgcctcggccacggccgtgcaggcc
ttcatccgccgcctggtggcggacgagaaccgcgccaagccgctttccgacaatcagatc
atgctgaaactggccgaacaaggtattgtcatcgcgcgccgtacggtggccaaataccgc
gaagccatgcgcatcgcgccggcatcggtgcgccgggcccaggccgcagcacgctga
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