KEGG   Bordetella flabilis: BAU07_00530
Entry
BAU07_00530       CDS       T04592                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bfz  Bordetella flabilis
Pathway
bfz02020  Two-component system
bfz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bfz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BAU07_00530
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BAU07_00530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfz03021]
    BAU07_00530
Transcription machinery [BR:bfz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BAU07_00530
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID FGase HolB_lid
Other DBs
NCBI-ProteinID: ANN75809
UniProt: A0A193G969
LinkDB
Position
113571..115007
AA seq 478 aa
MQNIVPMTRHALELRPGQHLALTPQLQQSIRMLQLSTLDLETEISQALSDNPLLERDEDP
RGDDVDPEREGSAHDDEPAPERETGVDEMPGAKGVYSDDDSEMPEQARAETLREHLLAQL
SLTRAGQRDAALTALLIDELDENGYLASPLDEILSWLPAEIEADIDELRAALRLLQSFDP
PGVGAADMAECLDLQLRRPDVAVLPEARDPAVLACARRICAEHLPLLAGNAARLREALQC
DDAMLRGARALILKLDPRPGRKWTVPAADYAIPDVIVRKGRKGWHVVLNSAAMPRLRING
VYARMLGNQREASHAALHAQLQQARWMIRNVEQRFDTILRVAQAIVNHQAAFFSQGPSAM
RPLILKDIAGELGLHESTISRATTQKYMLTPFGTMELKDFFGAGVATDSGDAASATAVQA
FIRRLVADENRAKPLSDNQIMLKLAEQGIVIARRTVAKYREAMRIAPASVRRAQAAAR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgcaaaatattgtacctatgactcgccacgccttagaactccggccaggacaacatctt
gccctgaccccgcaattgcagcagtccatccggatgctgcagttgtcgacgctcgacctc
gagacggagatctcacaggccttgtccgataatccgttgctcgaacgcgacgaagacccg
cgcggcgacgacgtcgatccggaacgcgagggctcagcccatgacgacgaaccggcacca
gaacgggaaaccggagtcgacgaaatgccgggcgccaagggcgtgtactcggacgacgac
agcgagatgcccgaacaggcgcgcgccgaaaccttgcgcgagcacttgctggcccaactg
tcgctgacccgcgcgggtcagcgcgatgcggcgctcaccgcgctgctgatcgacgaactg
gacgagaacggctatctggcttcgccgttggacgaaatcctgtcctggctgccggccgag
atcgaggccgacatcgacgagctgcgggccgcgctgcgcttgctgcaatccttcgacccg
ccgggcgtcggggcggccgacatggcggaatgcctggacctgcaactgcgccgtccggac
gttgccgtgcttcccgaggcccgcgatccggccgtgctcgcctgtgcgcggaggatctgc
gccgaacacctgccgctgctggccggcaatgccgcgcgcctgcgcgaagcgctgcagtgc
gacgacgccatgctgcgcggcgcgcgcgccctgatactgaaactggatccgcggcccggc
cgcaaatggacggtcccggcggcggactacgccattcccgatgtcatcgtgcgcaagggc
cgcaaaggctggcatgtggtcctgaacagcgcggcgatgccgcgcctgcgcatcaacggg
gtctatgcacgcatgctgggcaaccagcgcgaggccagccacgccgccctgcacgcccaa
ttgcagcaggcgcggtggatgatccgcaacgtggaacagcgtttcgacaccatcctgcgc
gtggcccaggccatcgtgaatcaccaggcggcgttcttcagccaggggccgtcggccatg
cggccgcttatcctcaaggacatcgccggcgagcttggcctgcacgaatccaccatctcg
cgggcgaccacccagaagtacatgctgacgccgttcggcacgatggagctgaaggatttc
ttcggcgcgggcgtcgccacggacagcggcgacgccgcctcggccacggccgtgcaggcc
ttcatccgccgcctggtggcggacgagaaccgcgccaagccgctttccgacaatcagatc
atgctgaaactggccgaacaaggtattgtcatcgcgcgccgtacggtggccaaataccgc
gaagccatgcgcatcgcgccggcatcggtgcgccgggcccaggccgcagcacgctga

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