Bordetella flabilis: BAU07_02765
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Entry
BAU07_02765 CDS
T04592
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAU07_02765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_02765
Enzymes [BR:
bfz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BAU07_02765
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BAU07_02765
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAU07_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ANN76182
UniProt:
A0A193G869
LinkDB
All DBs
Position
complement(625632..626459)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIATVITDRPLVQLIVREPRLRWPVPADLPDTLAGRTIVECGRRGKYL
LLRFEHGTQIVHLGMSGSLRRVVEGEAPRRHDHVEWVFEHATLRLHDPRRFGAVLWHPAA
AGPIESHPLLAKLGIEPFDPRFGGAWLHAHLRGRAAPIKQVLLAGEAVVGVGNIYASESL
FRAGIHPRTPARRLSLARCERLALAIRQTLEDALASGGSTLRDYVGAGGEPGSYFTIHAA
VYERAGQPCRICATPIRRIVQGQRASYYCVKCQRA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcctgaagtcgagaccacccggcggggaatcgcgaccgtcattacagac
cgcccgctggtccagctaatcgtaagagaaccgcgcctgcgctggcctgttccggccgac
ctccccgacacgctggccggccgtaccatcgtcgaatgcggccggcgcggcaagtacctg
ttattgcgcttcgaacacggcacgcagatcgtccatctgggcatgtccggatcgctgcgc
cgcgtggtcgaaggcgaagcaccgcggcgccacgatcacgttgaatgggtgttcgaacat
gcgacgctgcgcctgcatgatccgcgccgtttcggtgcggtgctgtggcacccagccgca
gcgggtcccatcgaatcgcacccactgctggccaagctggggatcgaaccgttcgacccg
cgtttcggcggggcctggctgcacgcgcatttgcgcggccgtgccgcgccgatcaagcag
gtgctgctggccggcgaggccgtcgtcggcgtgggtaatatctacgcgtcggaaagcctg
ttccgggccggcatacacccgcgcacgccggcgcgccggctgtcgctggcgcgttgcgag
cgcctggcgctggccatccggcagacgctggaagatgcgctggcttccgggggcagcacc
ctgcgcgactacgtcggcgccgggggcgagccgggcagctacttcaccatccacgccgcc
gtctacgaacgcgccgggcagccgtgccgaatttgcgccacgccgatacgccgcatcgtg
cagggccagcgcgcctcgtattactgcgtgaagtgccagcgggcctga
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