Bordetella flabilis: BAU07_08565
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Entry
BAU07_08565 CDS
T04592
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAU07_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfz03019
]
BAU07_08565
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_08565
Enzymes [BR:
bfz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAU07_08565
Messenger RNA biogenesis [BR:
bfz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAU07_08565
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAU07_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
DUF4096
Motif
Other DBs
NCBI-ProteinID:
ANN77156
UniProt:
A0A193GCH3
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All DBs
Position
complement(1951513..1953318)
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AA seq
601 aa
AA seq
DB search
MPVQKSKAAASRDGIPAQARRILREQFGIRTLRPGQAEVMASVLRGNDTIAVMPTASGKS
LCYQVPALCLPGLTVVVSPLIALMKDQDEKLAELGVDAAVFNSATPEADQARYRRDAARH
RHPILLATPERLADREFIHWLQRQSVSLFVVDEAHCISQWGHDFRPAYLEIPGVVRALGS
PPVLAMTATATDEVIQDIAASLDLRAACVVKVGVYRDNLHYEVRQVAGEESKQAAVLELV
AGTPGSAIVYTATVKEAEALYEMLKEAGENVELYHGRLPSRRRTQAQDGFMEGSVRVMVA
TDAFGMGIDKPDVRLVVHAQLPGSLDAYYQESGRAGRDGKAARCVLVHEEKDKRVQQFFL
ANRYPSEEMLQRLVRTLAAAPAPLSFAALREAMADTGLRKLQVGLKLLQDGGIVARHAEG
AASPAHGDTISLLEPSDATKDQARRVAAAARAYRERAEGDRQTLEAMVAYARSGRCRWRM
LLDHFGEAPPWERCDTCDSCKLVLAAESAAQAGDLPENEQPQRSVAVLHVGDGVRVRRYG
AGVVEAVTRERVDIRFPNGDLRRFLPGYVRRLKRKPPLPAAPEAQPLQTETRLRTPLAGS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcagaagagtaaggcagcggcaagtcgggacggcatccccgcgcaggcccgg
cgcatcctgcgcgagcagttcggcatccgtactttgcgcccgggccaggccgaggtcatg
gccagcgtcctgcgcggcaacgacaccatcgccgtcatgcccacagccagcggcaagtcg
ctgtgctatcaggttccggcactgtgcctgcccgggctgacggtcgtcgtttctccgctc
atcgcgttgatgaaggaccaggacgagaagctggccgaactgggcgtggacgccgccgtc
ttcaacagcgcgacgccggaagccgatcaggcacgctaccggcgcgacgcggcgcgccac
cgccatcccatcctgcttgcaacgccggagcggctggcggaccgcgagttcatccactgg
ctgcaacgccaatccgtatcgctgttcgtggtggacgaggcgcattgcatttcgcaatgg
ggccacgatttccggccggcgtatcttgaaatccctggcgtcgtgcgcgccctgggatct
ccgccggtgctggcgatgacagccaccgcgacggacgaggtcatccaggatatcgccgcg
tcgctggacctgcgcgccgcctgcgtagtaaaggtgggcgtgtatcgcgacaacctgcat
tacgaggtacggcaggtcgccggcgaggaaagcaagcaggccgccgtgctggagctcgtg
gccgggacgcccggatcggcgatcgtctacaccgccacggtcaaagaagcggaagccctg
tacgaaatgctcaaggaggctggcgagaacgtcgagctttaccatggccgcctgccctcg
cgacgccgcacgcaggcgcaggatggcttcatggaaggcagcgtccgcgttatggtggct
accgatgccttcggcatgggcatcgacaagcccgacgtgcggctggtcgtgcatgcgcag
ctgcccggcagcctggacgcctactaccaggaatccggccgggcgggacgcgacggcaag
gcggcgcgttgcgtcctggtccatgaagaaaaggacaagcgcgtgcagcagttctttctg
gcaaaccgctatcccagcgaagaaatgctgcagcggctggtccgcaccctcgcggcggct
cccgccccgctatcgttcgcggcgctgcgcgaggcaatggccgacaccggcctgcgcaaa
ctccaggtcggcctgaagctgctccaggatggcggcatcgttgcccgacatgccgagggc
gcggccagcccggcgcacggcgacaccataagtctgttggagcccagcgacgcgaccaag
gaccaggcacggcgggtcgcggcggctgcccgcgcctatcgggaacgcgccgaaggcgac
cggcaaaccctggaggccatggtcgcctacgcacgcagcggccgctgccgctggcgcatg
ctgctggaccatttcggcgaggccccgccctgggaacgatgcgatacctgcgatagttgc
aaactggtcttggccgctgagtcggccgcacaagcgggcgacttgccggaaaacgagcaa
ccccagcgcagcgtagccgtactccatgtcggcgacggggtccgcgtgcgccgctacggc
gcgggagtggtcgaggccgtcacgcgcgaacgcgtcgacatccgctttccgaatggcgac
ctgcgccgcttcctgccgggttatgtgcgccgcctgaagcggaagccgcccttgccggct
gcgcccgaagcgcagccgctgcaaacggagacacgcctcaggacgcctctcgctggatca
cgctga
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