Bordetella flabilis: BAU07_08860
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Entry
BAU07_08860 CDS
T04592
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03030
DNA replication
bfz03410
Base excision repair
bfz03420
Nucleotide excision repair
bfz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAU07_08860
03410 Base excision repair
BAU07_08860
03420 Nucleotide excision repair
BAU07_08860
03440 Homologous recombination
BAU07_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfz03032
]
BAU07_08860
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_08860
Enzymes [BR:
bfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAU07_08860
DNA replication proteins [BR:
bfz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BAU07_08860
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BAU07_08860
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAU07_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANN77201
UniProt:
A0A193GCM0
LinkDB
All DBs
Position
2013008..2015725
Genome browser
AA seq
905 aa
AA seq
DB search
MNKTLLLVDGSSYLYRAYHAMPDLRNAQGEPTGALYGVVNMLRKLKQDYDAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHSVVRALGWPIFAVEGVEADDIIGTLARI
ATEHGLKTIVSTGDKDLAQLVNEHVTLVNTMSGETLDPQGVVKKFGVPPERIVDYLMLIG
DAVDNVPGVDKVGPKTAVKWLTEFGSIDKLIEGAETIKGVAGSNLRTAIPNFDLTRKLLS
VRCDCDLTGLLSGPEQLVAEEEDKEALLALYERYGFRSWLREASGESERVPTGDSRIAPE
RPAAPEQTDYQVITDWAAFDSWIEKLRAAPLAAFDTETTSLDEMQARLVGMSFAVEPGVA
CYIPVAHRGPEAGEQLPKDEVLRRLRPWLEDPAAPKLLHNAKYDAHVLANEGIRLAGVAE
DTMLQAYVLESHRTVSLADLAQRWLGRSGITYEQLCGKGANQICFDEVAVERAGQYAAED
ADFTLQMHQVLRPRVAAQAGLDFVYKLELQVSEVLTGIERTGVRVDAEELARQSHALGQE
MMSLEQRAYELAGQPFNLNSPKQLGEILFTRMQLPVVRKTASGVPSTDEEVLSKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYAQAAVITGRLASSEPNLQNIPVR
TPAGRRVREAFIAERGVLMSADYSQIELRIMAHVSDDANLQHAFATGADIHRATAAEVFG
VALDAVAAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAQYME
STRVLAREQGYVETVFGRRLWLPEIRGGSGPRRQAAERAAINAPMQGTAADLIKMAMVAV
QRWIEQEKLLTRMTMQVHDELVLEVPDPEIEHVREHLPRLMCGVAQLRVPLVAEVGVGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccctattgctggttgacggttctagctatttgtaccgcgcctatcatgcc
atgcctgacctgcgaaacgcgcaaggcgagcccacgggggccctgtatggcgtggtcaat
atgctgcgcaagctgaagcaggactatgacgcggagtatgcggcctgcattttcgatgcc
cgtggcaaaaccttccgtgacgacctgtatcccgaatacaaatcgcaccggccaccgatg
cccgaagacctggccgcgcagatcgagcccatacatagcgtggtgcgggcgctcggatgg
ccgatcttcgccgtcgaaggcgtggaagcggacgacatcatcggcaccttggcgcgcatc
gcgaccgaacatggtctgaagaccatcgtttcgaccggcgacaaggacctggcccagttg
gtcaacgagcacgtcacgctggtcaacaccatgtccggcgagacgctggacccgcaaggg
gtggtcaagaagttcggcgtaccgcccgaacgcatcgtggactatctgatgctgatcggc
gacgcggtcgacaatgtcccgggcgtggacaaggtcggaccgaagaccgccgtcaaatgg
ttgacggagttcggctccatcgacaagctgatcgagggggccgagaccatcaagggcgtg
gcgggcagcaatctgcgcacggccatcccgaacttcgacttgacccgcaagctgctgtcc
gtgcgttgcgactgcgatctcacgggcttgttgtccgggccggaacaactggtggcggag
gaagaggacaaggaggccctgctcgcactttacgagcgatacgggttccgcagctggttg
cgcgaggccagcggggaaagcgaacgggtcccgaccggtgactcgcggatcgcgcccgaa
cgtcccgccgcgccggagcagacggactaccaggtcatcaccgattgggcggccttcgac
agctggatcgaaaagctgcgcgccgcgccgctggccgccttcgacacggagaccacgtcg
ctggacgagatgcaggcgcgcctggtgggcatgtcgttcgcggtcgagcccggcgtggcc
tgctatatcccggtcgcgcatcgcggtcccgaggccggcgaacaattgccgaaggacgag
gtgctgcgccgtttgcggccgtggctggaagacccggccgcccccaagctgctgcataac
gccaagtacgacgcgcatgtgctggccaacgaaggcatacgactggccggcgtcgccgaa
gacaccatgctgcaggcctatgtgctggaatcgcatcgcaccgtcagcctcgccgacctg
gcgcaacgctggctgggccgcagcggcattacctacgagcagttgtgcggcaagggcgcc
aaccagatctgcttcgatgaagtcgcggtcgaacgcgcgggccagtatgccgccgaggat
gcggatttcaccctgcagatgcaccaggtgttacgtccgcgtgtggcggcgcaggccgga
ctggatttcgtatacaagctggaattgcaggtatcggaggtcctgacggggatcgaacgt
accggcgtgcgcgtcgacgccgaggaactcgcgcgccagagccacgcgctgggccaggaa
atgatgtcgctggagcagcgcgcctacgaactcgccgggcagccgttcaacctgaattcg
cccaagcagctgggcgaaatcctgttcacccgcatgcagctgccggtggtacgcaagacg
gcgagcggcgtgccctccaccgacgaggaagtgctgagcaagctggcgcaggactacccc
ctgccgcaggtgctgctggaataccgcggcctgtccaagctgaagtccacctatacggac
aagctgccgcgcatgatcaatccggccacgggccgcgtgcacacgcactacgcacaggcc
gccgtcatcaccggccgcctggcatcgtccgaacccaacctgcagaacatcccggtgcgc
acaccggccgggcggcgcgtgcgggaagccttcatcgccgagcggggcgtgttgatgtcg
gcggattattcccagatcgaattgcgcatcatggcgcacgtctcggatgacgccaacctg
cagcacgccttcgcgacgggggcggacatccatcgggccaccgccgcggaagtgttcggc
gtggcgctggacgccgtggcggccgagcagcgccgcgcggccaaggcgatcaacttcggg
ctgatctacggcatgggcgtgttcggcctggcgtcgaacctcggcatcacgcgcgacgcg
gcgcaggcctacatcgaccgctatttcgcccgatatcccggcgtggcgcagtacatggag
tcgacccgcgtgctggcgcgcgaacagggctatgtggaaaccgtcttcggccgccggctg
tggttgccggagatccgcggcggttcgggcccgcgccggcaggccgccgagcgcgctgcc
atcaacgcgcccatgcagggcaccgccgccgatctcatcaaaatggccatggtcgccgtg
cagcgctggatagagcaggaaaagctgctgacgcgcatgaccatgcaggtgcacgacgaa
ctggtgctcgaagtgccggatccggagatcgagcacgtgcgcgagcatcttccccggttg
atgtgcggcgtcgcgcaattgcgggtgccgctggtggccgaagtcggcgtgggcaagaac
tgggaacaggcgcactag
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