Bordetella flabilis: BAU07_09260
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Entry
BAU07_09260 CDS
T04592
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03030
DNA replication
bfz03430
Mismatch repair
bfz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAU07_09260
03430 Mismatch repair
BAU07_09260
03440 Homologous recombination
BAU07_09260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfz03032
]
BAU07_09260
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_09260
Enzymes [BR:
bfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAU07_09260
DNA replication proteins [BR:
bfz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAU07_09260
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAU07_09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
GDH_HM2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ANN77269
UniProt:
A0A193GDB4
LinkDB
All DBs
Position
2124924..2128421
Genome browser
AA seq
1165 aa
AA seq
DB search
MSEEAAVAPSPFVHLRVHSEFSVVDGIVRIPDLIKRAAKLSQPAVALTDLSNLFGLIKFY
KAARGAGIKPIAGCDVWLTNDDDRDKPHRLLVLVRDRQGYLNLCELLTKAWLGNQHKGRA
EIRREWLQAAEGLIVLSGGRAGDVGQALEAGSMAQAAALARQWAAAFPNAYYIELQRAGF
DGDEAYVQAAMRLAGECGLPVVATHPVQFLDKHEFQAHEARVCIAEGEILANPRRVRRFT
EDQYLLDGDEMARRFADVPSALANTVEIAKRCNLTLVLGKPRLPDFPTPEGVTLDDYLVQ
LSEEGLEKRLQFLFPDEAERQAKRDMYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNN
GVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERV
IDYVKSKYGREAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPADPWTLE
RTLKDEPAFKERYEQEEEVRGLVDLAQPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQP
GQENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNETKRDFDIMALPLDD
PAAYKILTEGNTTAVFQLESRGMKELLKKLKPSTFEDIIAMLALYRPGPLESGMVDDFVN
RKHGRAPVDYFHPDLEATLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPE
EMAKHRELFQKGAQEKGHDPNLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAYH
PTEFLAATLSSDMDDTDKVQTFWRDALDNGVEVLPPDVNASGYRFEPVADDRTAKGLPPR
TMRYGLGAVKGTGQGAVEDIVRAREQGGPFKDLFDFCRRVDKHTVNRRTIEALIKAGAFD
SITPNRAALLASVPMAMEGAEQAARSANQVSLFGDDAGDVVASELAKVPPWNLHTRLTEE
KSALGYYFSGHLFDAWRDEVRRIVPTTLARVEPQRELQWMCGVLAGVRVMMTRRGKMVFA
VLDDGTAQVEISIFNELYEKHRNRLREDQLLIVQGKVSNDEYSGGMRIVAESLFDLQLAR
EARARALRIRLNGNADAEHLRKLLNPYRAEPENGVPGTPVEITYTRDNFLCTVRLGEDWR
VRMADALLDRLNEWTRPDGVEIAYS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaagccgccgtagccccgtccccctttgttcacctgcgcgtccactccgaa
ttctcggtggtggacggcattgtccgtattcccgacctgatcaagcgcgccgccaagctg
tcgcagccggctgtcgcccttaccgacctgtccaaccttttcggcttgatcaagttctac
aaggccgcgcgcggcgcgggcatcaagcccattgccggctgcgatgtctggctgaccaac
gacgatgaccgggacaagccgcatcgcctgctggtgctggtgcgcgatcggcaaggctac
ctgaacctgtgcgaactgctgaccaaggcctggttgggcaaccagcacaagggccgcgcc
gaaatccgccgcgaatggctacaggcggccgaaggtctcatcgtgttgtccggcgggcgc
gccggcgacgtggggcaggccctggaagcgggcagtatggcgcaggccgccgcactggcg
cgccagtgggccgccgcgtttccgaatgcctattacatcgagctgcagcgcgccggcttc
gacggcgacgaagcctatgtgcaggcggccatgcgcctggctggtgaatgcgggctgccc
gtggtggcgacccaccccgtccagttcctggacaagcatgagttccaggcgcacgaggcg
cgcgtctgcatcgcggagggcgagatactggccaacccgcgccgtgtacgccgcttcacc
gaagatcagtacctgctggacggcgacgaaatggcgcggcgcttcgccgacgtgccctcg
gcgctggccaataccgtcgagatcgccaagcgctgcaacctgacgctggtcctgggcaag
ccgcgcctgccggatttccccacgccggaaggcgtgacgctggacgactatctggtccag
ttgtccgaggaaggcctggagaagcgcctgcagttcctgtttcccgatgaagcggagcgc
caggccaagcgcgatatgtactacgagcgcctgcgctgggaatgcaagaccatcatccag
atgggctttcccggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaac
ggcgtgccggtagggccggggcgcggttccggcgcgggctcgctggtggcctacgcgctg
ggcatcaccgacctcgacccgatacgctatgacctcctgttcgaacggttcctgaatccc
gagcgcgtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgcgaacgggtc
atcgactacgtcaagtcgaagtacggccgcgaggctgtcagccagatcgctaccttcggt
acgctgggcgccaaggcggtggtgcgcgatgccgggcgcgtgctggacatgccttacatg
ttttgcgatggcctgtccaagctgattccgttcaacccggcggacccgtggacgctggaa
cgcacgctcaaggacgaacccgcgttcaaggagcgctacgagcaggaagaagaagtacgc
ggcctggtcgacctcgcccagccgctcgaaggcctgacgcgcaacatcggcatgcacgcg
ggcggcgtgctgatcgctccgggcaagctgacggacttctgcccgctgtactgccagccg
ggccaggaaaacagcgcggtgtcgcagttcgacaaggacgatgtcgaggcggccggcctg
gtcaagttcgacttcctggggctgcgcaacctgaccatcctggactgggccgtgcgctac
gtgcgccagttcaacgagacgaagcgcgacttcgacatcatggcgctgccgctggacgat
ccggcggcgtacaagatcctgacggagggcaataccaccgcggtgttccagctggaatcg
cgcggcatgaaggagctgctgaagaagctcaagcccagcaccttcgaagacatcatcgcc
atgctggcgctgtaccgtccgggcccgctggaatccggcatggtcgacgacttcgtcaac
cgcaagcacggtcgcgcgccggtggactatttccaccccgatctggaggccacgctcaag
agcacctatggggtcatcgtctaccaggaacaggtgatgttgatctcgcagatcatcggc
ggctattccctgggcggcgccgacctcctgcgccgcgccatgggcaagaagaagccggag
gaaatggccaagcaccgcgaactgttccagaagggtgcgcaggagaaaggccacgatccc
aacctggccgtgaagctcttcgacctgatggagaagttcgccggctacggcttcaacaag
tcgcactcggcggcctatgcgctgatcgcctaccagaccgcctggttgaaggcctaccat
cccacggagttcctggccgccaccctgtcgtccgatatggacgacaccgacaaggtgcag
accttctggcgcgacgcgctggacaacggcgtcgaagtcctgccgccggacgtcaatgcg
tcgggctaccgtttcgagcccgtggccgatgaccgtaccgccaagggcttgccgccgcgc
accatgcgctacggcctgggcgcggtcaaaggaaccgggcagggcgccgtcgaggacatc
gttcgcgcacgcgagcagggcggtccgttcaaggacctgttcgacttctgccggcgcgtg
gacaagcatacggtgaaccgccgtaccatcgaagccctcatcaaggccggcgccttcgac
agcattacgcccaatcgggcggcattgctggcgtcggtgccgatggccatggaaggcgcg
gaacaggccgcgcgcagcgccaaccaggtgtccctgttcggcgacgatgccggcgatgtg
gtggccagcgagctggccaaggtgccgccctggaacctgcatacccggctcaccgaggaa
aaatccgccctcggctactacttcagcggccacttgttcgatgcctggcgcgacgaagtg
cggcgcatcgtgccgaccacgctggcccgcgtcgagccgcagcgcgagctgcaatggatg
tgcggtgtgctggccggcgtgcgggtcatgatgacccggcgcggcaagatggtcttcgcc
gtgctggacgacgggacggcgcaggtcgagatctccatcttcaacgaactctacgagaag
catcgcaaccgcctgcgcgaggaccagttgctgatcgtgcagggcaaggtcagcaacgac
gagtattccggcggcatgcgcatcgtcgccgaatcgctgttcgacctgcagctggcgcgc
gaagcgcgcgcgcgcgccctgcgcatccggctcaatggcaatgccgacgccgaacacctg
cgcaaactgctcaatccctatcgcgcggagcccgagaacggcgtgccgggtacgcctgtg
gagatcacctacacgcgcgataacttcctttgcacggttcgcctgggcgaagactggcgg
gtccgcatggcggacgcgctgctcgatcggctgaatgaatggacacgtccggacggcgtg
gagatcgcctactcatga
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