Bordetella flabilis: BAU07_09590
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Entry
BAU07_09590 CDS
T04592
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bfz
Bordetella flabilis
Pathway
bfz02020
Two-component system
bfz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAU07_09590
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAU07_09590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_09590
Transcription machinery [BR:
bfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAU07_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
DUF4129
Motif
Other DBs
NCBI-ProteinID:
ANN77319
UniProt:
A0A193GDG2
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All DBs
Position
complement(2197139..2198623)
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AA seq
494 aa
AA seq
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MTHQATYELRARQQTSLTPRLQQSVKLLQMSALEFTREIEQALATNPFLEEGDEEGVATA
ADDAAMAAGPATTVLNDTISAAGDMQAPALTEAPAEVITELPELPDMQSEYSGDYPAARA
TGDGDSDVGQWARSMEDLRDRLRTELCSYRLAPRDRLMAEYIIEGLDEEGYLRTDLTDLA
GEGVFDPAPEPGEWEVALKLVQQLDVPGLGARNLAECLRLQLTAMEEDTPGRTLAMHIVE
QQLERLGKHDFSGLTRVCQCSDDELRQACALIRRLDPRPGLRYAKPDSSYVVPDVVVQKF
NGQWIVTPNRAAMPRARLHRAYADLFRNARYSDRSPMAQELQEARWLIRNVEQRYSTIQR
VAEAIVLRQQTFFEYGEIALRPLMLREIADELEIHESTVSRATSNKYMATPRGIFEFKHF
FSRELYTDTGGSCSAAAVRALIKEMIDGEDASTPLSDVDLAHLLGQQGVMVARRTVSKYR
GQLKYPPAEMRRQY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgacacatcaagccacgtacgaactcagggcgcgccagcaaaccagcctgacgccgcgg
ctccaacagtcggtaaaactgctccagatgtccgcgctggaattcacccgcgagatcgag
caggcactggcaacgaatccatttctggaggaaggggatgaagaaggcgtcgccacggcg
gccgacgacgcggccatggcggcgggtcccgcgacaacggtgctgaacgacaccatatcg
gcggctggcgatatgcaagcaccagcccttaccgaggcacctgcggaggtaattaccgaa
ctgcccgagttgcccgacatgcagtcggaatactccggcgattaccccgccgcgcgggcg
accggcgatggggacagtgacgtcgggcaatgggcacgcagcatggaggacttgcgcgac
cgcttgcgcaccgaactatgcagttatcggctggcgcccagggatcgcctgatggccgaa
tacatcatcgaaggcctggacgaggaaggctacctgcgcaccgatttgaccgatctcgcc
ggtgagggcgtattcgaccccgcaccggaaccgggagaatgggaggtcgcgctcaagctg
gtgcagcagctggatgtgccgggactgggcgcccgcaacctggcggagtgcctgcgcctg
cagttgaccgcaatggaggaagacacgccgggacgcacgctggcgatgcacatcgtcgag
cagcaactggaacgactgggcaagcacgatttctccggactcacgcgcgtatgccagtgt
agcgacgacgagttgcgccaggcttgcgcactgattcggcggctcgatccccggcccggc
ctgcgctatgcaaaaccggactccagctatgtcgtgccggacgtcgtcgtacagaagttc
aatggccaatggatcgtcacaccgaaccgggcagccatgccgcgcgcaaggttgcatcgc
gcgtatgccgacctgttccgcaatgcgcgctacagcgatcggtctccgatggctcaggag
ctgcaggaggcgcgttggctgatccgtaacgtggagcagcgctacagcaccatacagcgc
gtcgcggaggcgatcgtactacggcagcagaccttcttcgaatacggcgaaatcgccctg
cgccccttgatgctccgcgagatcgccgacgagctggagatccatgaatccaccgtgtcg
cgcgcgaccagcaacaaatacatggccacgccacgcggcattttcgaattcaagcatttc
ttctcgcgcgagctctacacggatacaggcggaagctgctcggccgccgcggtgcgtgcg
ctgatcaaggaaatgatcgacggtgaagacgcgtccacacctttgtcggacgtcgacctt
gcgcatctgctgggccagcaaggggtcatggtggcacgtagaacggtctccaaataccgc
ggccaactgaagtacccgcctgcggaaatgcgtcgccagtactga
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