KEGG   Bordetella flabilis: BAU07_09590
Entry
BAU07_09590       CDS       T04592                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bfz  Bordetella flabilis
Pathway
bfz02020  Two-component system
bfz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bfz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BAU07_09590
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BAU07_09590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfz03021]
    BAU07_09590
Transcription machinery [BR:bfz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BAU07_09590
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR DUF4129
Other DBs
NCBI-ProteinID: ANN77319
UniProt: A0A193GDG2
LinkDB
Position
complement(2197139..2198623)
AA seq 494 aa
MTHQATYELRARQQTSLTPRLQQSVKLLQMSALEFTREIEQALATNPFLEEGDEEGVATA
ADDAAMAAGPATTVLNDTISAAGDMQAPALTEAPAEVITELPELPDMQSEYSGDYPAARA
TGDGDSDVGQWARSMEDLRDRLRTELCSYRLAPRDRLMAEYIIEGLDEEGYLRTDLTDLA
GEGVFDPAPEPGEWEVALKLVQQLDVPGLGARNLAECLRLQLTAMEEDTPGRTLAMHIVE
QQLERLGKHDFSGLTRVCQCSDDELRQACALIRRLDPRPGLRYAKPDSSYVVPDVVVQKF
NGQWIVTPNRAAMPRARLHRAYADLFRNARYSDRSPMAQELQEARWLIRNVEQRYSTIQR
VAEAIVLRQQTFFEYGEIALRPLMLREIADELEIHESTVSRATSNKYMATPRGIFEFKHF
FSRELYTDTGGSCSAAAVRALIKEMIDGEDASTPLSDVDLAHLLGQQGVMVARRTVSKYR
GQLKYPPAEMRRQY
NT seq 1485 nt   +upstreamnt  +downstreamnt
ttgacacatcaagccacgtacgaactcagggcgcgccagcaaaccagcctgacgccgcgg
ctccaacagtcggtaaaactgctccagatgtccgcgctggaattcacccgcgagatcgag
caggcactggcaacgaatccatttctggaggaaggggatgaagaaggcgtcgccacggcg
gccgacgacgcggccatggcggcgggtcccgcgacaacggtgctgaacgacaccatatcg
gcggctggcgatatgcaagcaccagcccttaccgaggcacctgcggaggtaattaccgaa
ctgcccgagttgcccgacatgcagtcggaatactccggcgattaccccgccgcgcgggcg
accggcgatggggacagtgacgtcgggcaatgggcacgcagcatggaggacttgcgcgac
cgcttgcgcaccgaactatgcagttatcggctggcgcccagggatcgcctgatggccgaa
tacatcatcgaaggcctggacgaggaaggctacctgcgcaccgatttgaccgatctcgcc
ggtgagggcgtattcgaccccgcaccggaaccgggagaatgggaggtcgcgctcaagctg
gtgcagcagctggatgtgccgggactgggcgcccgcaacctggcggagtgcctgcgcctg
cagttgaccgcaatggaggaagacacgccgggacgcacgctggcgatgcacatcgtcgag
cagcaactggaacgactgggcaagcacgatttctccggactcacgcgcgtatgccagtgt
agcgacgacgagttgcgccaggcttgcgcactgattcggcggctcgatccccggcccggc
ctgcgctatgcaaaaccggactccagctatgtcgtgccggacgtcgtcgtacagaagttc
aatggccaatggatcgtcacaccgaaccgggcagccatgccgcgcgcaaggttgcatcgc
gcgtatgccgacctgttccgcaatgcgcgctacagcgatcggtctccgatggctcaggag
ctgcaggaggcgcgttggctgatccgtaacgtggagcagcgctacagcaccatacagcgc
gtcgcggaggcgatcgtactacggcagcagaccttcttcgaatacggcgaaatcgccctg
cgccccttgatgctccgcgagatcgccgacgagctggagatccatgaatccaccgtgtcg
cgcgcgaccagcaacaaatacatggccacgccacgcggcattttcgaattcaagcatttc
ttctcgcgcgagctctacacggatacaggcggaagctgctcggccgccgcggtgcgtgcg
ctgatcaaggaaatgatcgacggtgaagacgcgtccacacctttgtcggacgtcgacctt
gcgcatctgctgggccagcaaggggtcatggtggcacgtagaacggtctccaaataccgc
ggccaactgaagtacccgcctgcggaaatgcgtcgccagtactga

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