Bordetella flabilis: BAU07_12075
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Entry
BAU07_12075 CDS
T04592
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BAU07_12075
09124 Replication and repair
03420 Nucleotide excision repair
BAU07_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_12075
03036 Chromosome and associated proteins [BR:
bfz03036
]
BAU07_12075
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_12075
Enzymes [BR:
bfz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BAU07_12075
Transcription machinery [BR:
bfz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BAU07_12075
Chromosome and associated proteins [BR:
bfz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BAU07_12075
DNA repair and recombination proteins [BR:
bfz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BAU07_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ANN80426
UniProt:
A0A193GLY8
LinkDB
All DBs
Position
2766443..2768749
Genome browser
AA seq
768 aa
AA seq
DB search
MDAAPPAYTVAVRALCEFSARTGDLDLRFAPSPSAQQGQAGHAVVTARRPAGYQTEVFLS
GTHGRLRVRGRADGYDPAGHRVEEIKTHRGNAQAIPHHQRALHWAQVRIYGHLLCRKLGC
AEIGLALVYFDIATQRETVLVERQDAASLQAFFEDACARFSAWADLELAHRDARDAALSA
LRFPHASFRAGQRELAETVYRAVRDRQCAMVQAPTGIGKTLATLFPTLKAAPGRLDKVFF
LCAKTAGRQLALQAIDRMQAEQGAGPSLRTLELVARDQACVHPDKACHGGSCPLARNFYD
RLPAARAAALAEPRWDRAAVRGVALEHAVCPYFLAQELARWSDVVIGDYHYYFDHNGLLH
GLALANQWRVAVLVDEAHNVLERGRGMYTAELSASEAQRLARVAAPALRAPLRAMAQALR
PAGAQTPQAPSPALRQALEQGTAAIAEHMAGAVAGGVAEQVPGNTAGNMAGHGSAPAGAD
DALLRFYFDALRFLRIADDYGAHSIFDVTQDAACIRNVVPAPFLAPRFAAAHASVLFSAT
LNPWHFYTDTLGVPRGTVCLDIPPPFDPARLAVHVVGNVSTRYADRDGSLDIVVDLIARE
YARRPGNYLCFASSFEYLHRIFERLRERHPAMRAWTQTAGMPDQDRAAFLARFQADGQGL
GFAILGGAFGEGIDLPGTRLIGAFVLTLGLPQWNRENGQMMRCMQDRFGQGYDYAYLYPG
LQKVVQAAGRVIRSETDEGCVYLVDERFRRPAVRRLLPAWWQITEVPA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atcgacgccgcgccgcccgcctataccgttgccgtgcgcgcgttgtgcgagttcagcgcg
cgcaccggcgacctggacctgcgcttcgcgccgtcgccgtcggcccagcagggccaggcc
ggccatgcggtggtgacggcacgtcgtccggcgggctaccagaccgaagtcttcctgagc
ggcacgcatggcaggctgcgcgtccgcggccgggccgacggctacgatcccgccggtcat
cgcgtcgaggagatcaagacgcatcgcggcaacgcgcaggcgattccgcatcatcaacgt
gccttgcactgggcccaggtccgcatctacggccatctgctgtgccgcaagctcggatgc
gccgagatcggattggcgctggtgtatttcgacatcgccacgcagcgcgagacggtgctg
gtggaacgccaggacgcggcatcgctgcaggccttcttcgaagatgcctgcgcgcgcttt
tccgcctgggcggacctggaattggcgcatcgcgacgcacgggacgcggcgctgtcggcc
ttgcgctttccccatgccagcttccgggccgggcaacgcgaattggcggaaacggtgtac
cgcgcggtccgcgaccggcaatgcgcgatggtgcaggcgcccacgggcatcggcaagacg
ctggcgaccttgttccccacgctgaaggccgcgccgggacgcctggacaaggtgtttttc
ctctgcgccaagaccgccggccgccagctcgccctgcaggccatcgaccggatgcaggcg
gagcagggcgcaggcccgtccttgcgcaccctggaattggtggcgcgcgaccaggcctgc
gtacatccggacaaggcctgccacggcggctcgtgcccgctcgcgcggaatttctacgac
cgactgcccgccgcgcgcgccgccgcgctggccgaaccccgatgggaccgcgctgcggtg
cgcggcgtcgccctggagcatgcggtctgcccgtatttcctggcgcaggaactggcgcgc
tggagcgatgtggtgatcggggactatcactactacttcgaccacaatggcttgctgcat
ggcctggcgctggccaaccagtggcgcgtcgccgtgctggtggacgaggcgcacaacgtg
ctggagcggggacgtggcatgtatacggcggagctcagcgcgtccgaggcgcagcgcctg
gctcgggtcgccgcgccggccctgcgggcgcctttgcgggcaatggcgcaggccttgcgg
ccggccggcgcgcagacgccgcaggcaccgtctccagcgttgcggcaggcgctggagcag
ggcacggcggccatcgcggagcatatggcgggagctgtagcgggtggtgtggcggaacag
gtgcccggaaatacggccggaaacatggccggacatggatcggcgcccgccggcgccgac
gacgccctcctgcgcttctacttcgatgccttgcgcttcctgcgcatcgcggacgactac
ggagcgcattcgattttcgatgtgacgcaggacgcggcgtgcatccgcaacgtcgttccg
gccccgttcctggcgccgcgtttcgccgccgcccacgccagcgtgctgttctcggccacc
ttgaatccatggcatttctacaccgacacactgggcgtgccgcgcggcaccgtgtgcctg
gatatcccgccgcctttcgacccggcgcgactggcggtccatgtcgtcggcaacgtgtcc
acacgctatgccgaccgcgacggcagcctggatatcgtcgtggacctgatcgcccgcgag
tacgcgcggcggccaggcaattacctgtgcttcgccagcagcttcgaatacctgcaccgg
atcttcgagcggctgcgggaacggcatccggccatgcgcgcctggacacagaccgccggc
atgccggaccaggaccgcgcagccttcctggcgcgcttccaggcggatggacaaggactt
gggttcgcgatactgggcggcgcgtttggcgaaggcatcgacctgcccgggacgcgcctg
atcggcgccttcgtcctgaccctcgggttgccgcagtggaaccgggagaacggccagatg
atgcgctgcatgcaggaccgctttggccaggggtacgactatgcctatctatacccgggt
ttgcagaaggtcgtgcaggccgccggcagggtgatccgctcggaaaccgatgaaggctgc
gtctatctggtggacgagcgtttccgccgtcccgcggtgcggcgcctgctgccggcgtgg
tggcagatcaccgaggtgccggcgtaa
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