Bordetella flabilis: BAU07_17300
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Entry
BAU07_17300 CDS
T04592
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bfz
Bordetella flabilis
Pathway
bfz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAU07_17300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_17300
Transcription machinery [BR:
bfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAU07_17300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
TMEM120A-B
Motif
Other DBs
NCBI-ProteinID:
ANN78635
UniProt:
A0A193GFP8
LinkDB
All DBs
Position
complement(3925665..3927938)
Genome browser
AA seq
757 aa
AA seq
DB search
MNKSIGKTSSAVELGDEAKTAKRAASKAAEKTSAKAAVKVAPKSAAVKPTAAKKPVKAAA
ETPEKVAKAAAKAKKAEDKLAELVGRPGPVPSGRRPGRPAKNQNNDNPDFDDAGDGEGEV
LPELKPVKRGGKRGKGDPKDLIARGPVTPEEYEARRNRLKQLIKLGKDRGYLTYGEINDH
LPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTT
VDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILA
HVTRVRESQAQIDEVVDGLVDPEDGEEYAGAGVTAEEDENDDGPAGGMSSKQLEDLRVKA
LAKFDEVSKHFDKMRASYEHEGYRSAGYLKAQEAIQNELMGIRFTAKMVERLADTLRNQV
EEVRQLERAVLHTCVDRAGMPRSHFIKVFPGNETNLNWVVEEVAAGHPYAETLERQVPAV
QELQQKLIDLQSRVVLPLKDLKEVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKMNRISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDDS
HLGDFIEDTATLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEVG
KQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLEGQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccatcggcaaaacctcctctgcagttgaattgggcgacgaagccaaaacg
gcgaagcgcgccgctagcaaggcggcggaaaagacatcggccaaagcggccgtcaaggtt
gcgcccaagtccgctgccgtgaagccgaccgcggcgaaaaagccggtcaaggccgcagcg
gaaacgccggagaaggtcgccaaggcggccgcgaaggcgaagaaggcggaagacaagctg
gccgaactggtcggccgtcccggccccgtgcccagcggccgtcgtccgggccgtcccgcc
aagaaccagaacaacgacaatcccgatttcgacgacgccggcgacggtgaaggcgaagtc
ttgcctgaactgaagcctgtgaagcgcggcggcaagcgcggcaagggcgatcccaaggat
ctgatcgcccgtggtcccgtcaccccggaagaatacgaagcccgccgcaatcggctcaag
cagctcatcaagctgggcaaggaccgcggctacctgacgtacggcgagatcaacgatcat
ctgccggacgacctggtcgacgcggaagccatcgacggcatcatcagtacgttcagcgac
atgggcatcgcggtctatgaccaggcgcccgacgcggaaaccctgttgatgagcgaaaac
gcgcccgtcgcgtccaacgacgatgacgtcgaggacgaggccgaggccgctctcaccacg
gtggattccgatttcggccgcaccaccgacccggtgcgcatgtatatgcgcgaaatggga
tcggtcgagctgctgacgcgcgaaggcgaaatcgaaatcgccaagcgcatcgaagatggc
ctgaagcacatggtcatggccatctcggcctgcccgacgaccatcaacgaaatcctggcg
catgtcacccgtgtccgggagagccaggcgcagatcgacgaggtggtggacggtctggtc
gacccggaagacggcgaggaatacgccggtgcgggtgtgaccgccgaagaggacgagaac
gacgacggccctgccggcggcatgagcagcaagcagttggaagacctgcgcgtgaaggcc
ctggccaagttcgacgaggtgagcaagcatttcgacaagatgcgcgcctcctacgagcac
gaaggctaccggtccgccggttacctgaaggcccaggaagccatccagaatgaactgatg
ggcatccgcttcaccgccaaaatggtggaacgcctggccgacaccctgcgcaaccaggtc
gaggaagtgcgccagctggaacgcgccgtcctgcacacctgcgtggaccgcgccggcatg
ccgcgttcgcatttcatcaaggtgttcccgggcaacgaaaccaacctgaactgggtggtg
gaagaagtcgccgcgggccatccgtatgctgaaacgctggaacgccaggtgccggccgtg
caggaattgcagcaaaagctgatcgacctgcagtcgcgtgtcgtcctgccgctgaaggac
ctgaaggaagtcaacaagcgcatggccaccggcgaagccaaggcccgcaaggccaagcgt
gaaatgaccgaggccaacctgcgtctggtgatctccatcgccaagaagtacaccaaccgt
ggtttgcagttcctggatctcatccaggaaggcaacatcggtttgatgaaggccgtggac
aagttcgaataccgacgcggctacaagttctccacgtatgcgacgtggtggatccgccag
gccattacgcggtccatcgccgaccaggcgcggaccatccgtatcccggttcacatgatc
gagacgatcaacaagatgaaccggatcagccgccagatcctgcaggaaacgggcgccgag
cctgatccggcgacgctggcgcagaagatggacatgccggaagacaagatccgcaagatc
ctgaagatcgccaaggaaccgatctccatggaaacgcccatcggtgacgacgacgactcg
cacctgggcgatttcatcgaggatacggccacgctggcgccttccgacgcggccctgcac
ggctccatgcgcgacgtggtgaaagaagtgctagactcgctgactccgcgcgaggcgaaa
gtcttgcgcatgcgcttcggtatcgaaatgagcaccgaccagacgctggaagaagtcggc
aagcagttcgacgtcacccgcgaacggatccgccagatcgaagccaaggcgttgcgcaag
ctgcgccatccgagccgtgccgacaagctgaagagtttcctcgaaggccagtaa
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