Bordetella flabilis: BAU07_20970
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Entry
BAU07_20970 CDS
T04592
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAU07_20970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfz03019
]
BAU07_20970
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_20970
Enzymes [BR:
bfz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAU07_20970
Messenger RNA biogenesis [BR:
bfz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAU07_20970
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAU07_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANN79263
UniProt:
A0A193GI44
LinkDB
All DBs
Position
complement(4703087..4704916)
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AA seq
609 aa
AA seq
DB search
MSEPRALDILRRVFGYESFRGEQQAIVDHVIQGGDALVLMPTGGGKSLCYQVPALVREGT
GVVVSPLIALMQDQVDALTELGVRAAYLNSTQDWRVAREVEQAFINGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYMGLSLLHERWPDVPRIALTATATEV
TRTEIAQRLSLDEARHFVASFDRPNIRYRIVEKNEVRKQLLDLIRTEHAGDSGVVYCLSR
ARVEETADFLCGHGVNALPYHAGLSATVRASNQSRFLREDGIVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDEVFRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQIGPCGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKSTDRVSQYGHDALSVFGVGADLSESAWRGVLRQLLAQGLL
TVDHEGYGTLALTEGSRAVLKGERQLMLRRESPKAGRAARTGTVRGRSPAIELPAEAQPL
FEALRAWRGDVARSHGVPAYVIFHDATLREIALARPTTVDELGRINGVGARKLEAYGADI
LERVATLVD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgcgcgccctggatatcctgcggcgcgttttcggctacgaatccttccgc
ggcgagcagcaagccattgtcgatcacgtgatccagggcggcgacgcgctggtgctgatg
cccaccggcggcggcaaatcattgtgctatcaggtgccggcgctcgtgcgcgagggcacc
ggcgtggtggtgtcgccgctcatcgcgctgatgcaggaccaggtcgacgccttgactgaa
ttgggcgtgcgcgcagcgtacctgaattcgacgcaggactggcgggtggcgcgcgaggtc
gagcaggccttcatcaatggggagctggacctgctctacgtggccccggaacgcttgctg
accgaccgctgcctgcagttgctggagcggggccgcattgcgctgttcgcgatcgacgag
gcccattgcgtttcgcagtgggggcacgatttccgtcccgaatacatgggcctgtcgctc
ctgcacgaacgctggccggatgtgccccgtattgcgctgaccgcgacggccaccgaagtc
acgcgtacggaaatcgcgcagcgcctgtcgctggacgaggcccgccatttcgttgccagt
ttcgaccgccccaacatccgctatcgcatcgtggagaagaacgaggtccgcaagcaattg
ctggatctgatccgcaccgagcatgccggggattcgggagtcgtgtattgcctgtcgcgg
gcccgcgtggaggaaaccgcggacttcctttgcggccatggcgtgaacgccttgccttat
cacgccggcctcagtgcgacggtacgcgcgtcgaaccagtctcgcttcctgcgcgaggac
ggcatcgtgatggtggcgaccatcgctttcggcatggggatcgacaagcccgacgtgcgc
ttcgtcgcgcatatcgacctgccgaaatcggtggagggctactaccaggagacggggcgc
gccggtcgtgacggcctgccggccacggcctggctggcctatggcttgcaggatgtggtg
cagcagcgccggatgatcgacgagtcgccgggcgacgaagtgttccggcgccgcctgggc
cagcaactggacgcgatgctgggcctgtgtgaaacggtggaatgccggcgcgtgcgtctg
ctggcgtatttcggccagcagatcgggccttgcggcaattgcgatgtgtgcctggagccg
ccgcaggcctgggatggcacggtggctgcgcagaaggtgctgtccgccgtatatcgcttg
tggaaggagcggggccagcgttacggcgccggacacatcatcgatatcctgcgcggcaag
agcacggaccgggtgagccagtacggtcacgatgcgctgtcggtgttcggcgtgggcgcg
gacctgtcggagtccgcttggcgcggcgtgctgcggcagttgctcgcgcaaggcctgttg
acggtggaccacgagggatacggcaccctggcattgaccgagggcagccgggcggtcctg
aagggcgagcggcaactgatgttgcggcgcgagtccccgaaggcgggacgcgcggcccgg
acgggaaccgtgcgtggccggtcgccggccatcgagttgccggcggaggcccagcccctg
ttcgaggccctgcgggcctggcgcggcgacgtggcgcgcagccatggcgtgcccgcttac
gtcatcttccacgatgcaaccttgcgcgagatcgcgctggcgcggcccacgacggtggac
gaactggggcgtatcaacggcgtgggggcgcgcaagctggaggcttacggcgcggatatc
ctggagcgggtcgccacgctggtcgattga
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