KEGG   Bordetella flabilis: BAU07_25460
Entry
BAU07_25460       CDS       T04592                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bfz  Bordetella flabilis
Pathway
bfz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bfz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAU07_25460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfz03400]
    BAU07_25460
DNA repair and recombination proteins [BR:bfz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BAU07_25460
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BAU07_25460
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_25 AAA_21 BCA_ABC_TP_C AAA_23 DnaJ_CXXCXGXG AAA_33 nSTAND3 AAA_22 NACHT ATPase Viral_helicase1
Other DBs
NCBI-ProteinID: ANN80013
UniProt: A0A193GK99
LinkDB
Position
5716779..5719676
AA seq 965 aa
MEAIRIRGARTHNLKNVSLDLPRQKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMDKPDVDLIEGLSPAISIEQKAAGHNPRSTVGTITEIHDYLRLLFARVGTPYC
PDHGLPLQAQSVSQMVDAVLGWSADTRLAILAPLARGRKGSFEDECASLQAQGYVRLRVD
GQMVELDNMPPLKKTEKHDIDVVIDRLRVRPESGQRLAESFETALTLADGRVVALDMDAE
REQVFSSRYACPVCSHSLPELEPRLFSFNNPMGACPTCDGIGQVGFFDPKRVVQFPELSL
AAGAIRGWDRRNAFTHSLLTSLAAHYDFDIEAPFESLPESLRNKVLYGSGDEEIAFVYLN
EKGRSTVKRHVFEGVIPNLERRWKETDSATVREELGKYRNIKSCPDCKGSRLRAEARHVL
IGTEKRDESERRGLAIYEVEGMPLSDCLDWFQDLTLAGAKQEIAQRIVREIEARLSFLNN
VGLNYLSLDRSADTISGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLQ
HLRDLGNSVIVVEHDEDMIRSADWVVDMGPGAGEHGGQVVAQGTPAQVQEDPHSLTGQYL
SGRRAIALPQRRPVEDSLPWLVVRGASGNNLKDVDLRIPAGRLVCVTGVSGSGKSTLVND
TLAVAVSRQLHHAQSEPAPYVALEGLEHFDKIITVDQSAIGRTPRSNPATYTGLFTPIRE
LFAGVPEARTRGYDPGRFSFNVKGGRCEACQGDGVVKVEMHFLPDMYVPCDVCQGKRYNR
ETLEIRYRGRNISEVLDLTVEQALEYFDSVPAISRKLHTLMDVGLSYLRLGQSATTLSGG
EAQRVKLSLELSRRSTGRTLYILDEPTTGLHFRDIELLLEVLNQLVEAGNTVLVIEHNLD
VIKTADWIVDMGPEGGDGGGRVVAEGTPETVAGVVESHTGRYLQRVLQARLADEDPPAAL
RKKAK
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggaagcgatacgcattcggggtgcacgcacccacaatctcaaaaacgtctcgctggat
ctgccccggcagaagctggtcgtcatgaccggcctgtccggttcgggcaagtcctccctg
gccttcgacaccttgtacgccgaaggccaacgtcgatacgttgaaagcctgtcggcttat
gcgcgccagttcctgcaactgatggacaagccggatgtcgacctcatagagggcctgtcg
ccggcgatttccatcgagcagaaagccgcgggccacaacccgcgctcgacggtgggcacc
atcaccgagatccacgactacctgcgcctgctgttcgcccgcgtgggcacgccgtattgc
ccggaccacggcctgcccttgcaggcgcagagcgtcagccagatggtggatgccgtgctg
ggctggtccgccgatacgcggctggccatcctggcgccgctggcgcgtggccgcaagggc
agtttcgaggacgaatgcgccagcctgcaggcgcagggctatgtgcgcctgcgcgtggat
gggcagatggtcgaactcgacaatatgccgccgctgaagaaaacggaaaagcacgacatc
gacgtggtgatcgaccgcctgcgggtgcgcccggaaagcggacaacgcctggcggaaagc
ttcgagacggcgctgacgctggccgacggccgcgtggtggccctggacatggatgcggag
cgcgagcaggtcttctccagccgctacgcctgcccggtgtgcagccatagcctcccggaa
ctggagccgcgcctgttcagcttcaacaatccgatgggcgcctgcccgacctgcgacggt
atcggccaggtggggttcttcgatcccaagcgcgtggtgcagtttccggagctcagcctg
gcggccggcgcgatccgcggctgggaccgccgcaatgccttcacgcattccctgctgacc
agcctggcggcgcactacgatttcgatatcgaggcgcccttcgaaagcctgccggagtcg
ctgcgcaacaaggtgctttacggctcgggcgacgaggaaatcgccttcgtctatttgaac
gagaaaggccgcagcacggtgaagcggcacgttttcgaaggggtgattccgaacctggag
cgccgctggaaggaaaccgattcggccaccgtgcgcgaagagctgggcaagtaccgcaat
atcaagagctgcccggactgcaagggatcgcgcctgcgcgccgaagcgcgccacgtgctg
atcggcacggagaagcgcgacgagagcgaacgccgcggcctggcgatctacgaggtggaa
ggcatgccgctgtccgactgcctggactggttccaggacctgaccctggccggcgccaag
caggagatcgcccagcgcatcgtgcgcgagatcgaggcacggctgagtttcctgaacaac
gtggggttgaactatctgtcgctggaccgcagcgcggacacgatttccggcggcgaagcg
cagcgtatccgcttggccagccagatcggctcggggctcacgggcgtgatgtatgtgctg
gatgaaccctccatcgggctgcaccagcgcgacaacgacaggctcatcggcacgctgcag
cacctgcgcgacctgggcaacagcgtcatcgtggtcgagcacgacgaggacatgatccgg
tctgccgattgggtggtggatatggggccgggcgcgggcgagcacggcggccaggtggtc
gcgcagggcacgccggcgcaggtgcaggaagatccgcattcgctgaccggccagtacctg
agcggccgccgcgccatcgcactgccgcagcgccggccggtcgaggacagcctgccctgg
ctggtggtgcgcggcgccagcggcaataaccttaaggacgtggacctgcgcatccctgcc
ggccgcctggtgtgcgtgacgggcgtgtcgggttccggcaagtcgacgctggtcaacgac
accctggcggtggccgtgtcgcgccagttgcaccatgcgcagagcgagccggcgccgtat
gtggcgttggaaggcctggagcatttcgacaagatcatcacggtcgaccagagcgccatc
ggccgcacgccgcgcagcaacccggcgacctataccggcctgttcacgcccatccgcgaa
ttgttcgccggcgtgccggaagcccgcacgcgcggctacgacccgggccgcttcagcttc
aacgtcaagggcggccgctgcgaggcctgccagggcgatggcgtggtgaaagtggagatg
cacttcctgcccgacatgtacgtaccctgcgacgtgtgccagggcaagcgctacaaccgc
gaaacgctggagatccgctatcgcggccgcaacatcagcgaggtgctggacctgactgtc
gagcaggccctggagtatttcgactcggtgccggccatctcgcgcaagctgcacacgctg
atggacgtgggcctgtcgtacctgcgcctggggcagagcgccaccaccctgtcgggcggc
gaggcgcaacgcgtgaagctctcgcttgagttgtcgcgccgcagcaccggccgcacgctg
tatatccttgacgaacccaccacgggcctgcatttccgcgatatcgaattgctgctcgag
gtcctgaaccagctggtggaagccggcaatacggtgctggtcatcgagcacaatctggat
gtcatcaagaccgccgactggatcgtcgacatgggacccgaaggcggtgatggcggcggc
cgcgtggtcgccgagggcactcccgaaacggttgcaggcgtggtcgaaagccataccggc
cgctacctgcaacgcgtgctgcaagcgcgcctggcggacgaggacccgcccgcagcgctg
cgcaagaaggcaaagtaa

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