Bordetella flabilis: BAU07_25790
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Entry
BAU07_25790 CDS
T04592
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAU07_25790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_25790
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_25790
Enzymes [BR:
bfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAU07_25790
Transcription machinery [BR:
bfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAU07_25790
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAU07_25790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ANN80074
UniProt:
A0A193GLC8
LinkDB
All DBs
Position
complement(5775759..5780006)
Genome browser
AA seq
1415 aa
AA seq
DB search
MKALLDLFKQVSQDEQFDAIKIGIASPEKIRSWSYGEVRKPETINYRTFKPERDGLFCSK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIMSDDDFLAKTEEYGDDFRALM
GAEAVRELLRTIDIDREVETLRGELKATGSEAKIKKISKRLKVLEGFQKSGIKPEWMVME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIILRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKAAKKLVESQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNVLFPANGEPSIVPSQDIVLGLYYTTRERINGRGEGIFFTDVAEVQRAYDNG
EVELQSRITVRLKEFEKDEQGEWQPVVRRYETTVGRALLSEILPKGLPFTVLNKALKKKE
ISRLINQSFRRCGLRDTVIFADKLMQSGFRLATRGGISIAMDDMLIPSAKEGILAEASKE
VKEIDKQYSSGLVTSQERYNNVVDIWGKAGDKVGKAMMEQLATEPVTNRHGEEVRQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVIIENDCGTSQGYSMKALVEGGEVIEPLRDRIL
GRVAAVDIVNPDTQETAIDAGTLLDEDLVDMIDRIGVDEVKVRTPLTCETRHGLCAHCYG
RDLGRGYMVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSALASAVETKSNGTVGF
ASTMRYVTNAKGERVAISRSGEIAIYDDNGRERERHKIPYGATVLVGDGEGVKAGARLAT
WDPLTRPIVSEYAGQVRFENIEEGVTVAKQVDEVTGLSTLVVITPKTRGGKIVMRPQIKL
INETGEEVKIAGTDHSVNISFPVGALITVRDGQQVAVGEVLARIPQESQKTRDITGGLPR
VAELFEARSPKDAGMLADVTGTVSFGKDTKGKQRLVITDLEGVSHEFLIPKEKQVLVHDG
QVVNKGEMIVDGPADPHDILRLQGIEKLATYIVDEVQDVYRLQGVKINDKHIEVIVRQML
RRVNIVDAGDAEFIPGEQVERSELLNENDRVVDEGKRPAIYDNVLLGITKASLSTDSFIS
AASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAYHLARKDKEALEAAERE
AARQLANPFEEPAVTIGSDHEGESAPEASEGPIAE
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctactcgacctcttcaagcaagtctcgcaagacgagcagttcgatgccatc
aagatcggcatcgcctcgcccgagaaaatccgttcgtggtcttacggcgaagtccgcaag
cccgaaaccatcaactaccgcaccttcaagccggagcgcgatggcctgttctgctcgaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcat
cgcggcgtcatctgcgaaaagtgcggcgttgaagtcacggtcgccaaggtgcgccgcgag
cgcatgggccatatcgaactggccagccccgtcgcgcacatctggttcctgaagagcctg
ccgtcccgcctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctggtgcgtcatcgaacctggcatgacgccgctcaagcgcggccagatcatg
tcggacgacgacttcctggccaagaccgaggaatacggtgacgacttccgcgccctgatg
ggtgcggaagccgtgcgcgagctgctgcgcaccatcgacatcgaccgcgaagtggaaacg
ctgcgtggcgaattgaaggccaccggttcggaagccaagatcaagaagatctccaagcgc
ctgaaggtgctggaaggcttccagaagtccggcatcaagccggaatggatggtcatggaa
gtgctgcccgtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgcttc
gcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaag
cgcctgctcgaactgaaggcgccggaaatcatcctgcgcaacgaaaagcgcatgttgcag
gaagccgtcgactcgctgctggacaacggccgccgcggcaaggccatgacgggcgccaac
aagcgccagctcaagtccctggcagacatgatcaagggcaagagcggccgcttccgccag
aacctgctgggcaagcgcgtcgactattccggccgttcggtcatcgtggtgggtcctcag
ctcaagctgcaccagtgcggcctgcccaagctgatggcgctggaactgttcaagccgttc
atcttcaatcgactggagatgatgggcctggccacgaccatcaaggccgcgaagaagctc
gtcgaaagccaggaacccgtcgtgtgggacatcctggaagaagtgatccgcgaacacccg
gtcatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttcgaaccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgttccgctgtcgctggaagcgcagttggaagcc
cgcacgctgatgctggcttcgaacaacgtgctgttccccgccaacggcgaaccgtcgatc
gtgccgtcccaggacatcgtgctgggtctgtactacacgactcgcgaacgcatcaacgga
cgcggcgaaggcatcttcttcaccgatgtcgccgaagtgcagcgcgcctacgacaacggc
gaagtcgaactgcaaagccgcattaccgtgcgcctgaaggagttcgagaaagacgagcaa
ggcgaatggcagccggtcgtgcgtcgctacgagaccacggtgggccgcgccctgctgtcc
gagatcctgcccaagggcctgcccttcaccgtcctgaacaaggcgctgaagaagaaggaa
atctcgcgcctgatcaaccagtcgttccgtcgctgcggcctgcgcgatacggtgattttt
gccgacaagctgatgcagtcgggcttccgcctcgctacgcgcggcggcatctcgatcgcc
atggacgacatgctgattccgtcggccaaggaaggcatcctggccgaagccagcaaggaa
gtgaaggagatcgacaagcagtattcgtcgggtctggtcacgtcgcaggagcgctacaac
aacgtcgtggacatctggggcaaggctggcgacaaggtcggcaaggccatgatggaacag
ctcgcgaccgagccggtcaccaaccggcacggcgaggaagtgcgccaggagtccttcaac
tccatctacatgatggccgactcgggcgcccgtggttccgccgcccagatccgccagctg
gcgggcatgcgtggcctgatggccaagccggatggctccatcatcgaaacgcccatcacg
gcgaacttccgcgaaggcctgaacgtactgcagtacttcatctcgacgcacggtgcgcgc
aagggcctggccgataccgcgctgaagaccgcgaactccggctacctgacgcgtcgcctg
gtcgatgtgacgcaggacctggtcatcatcgaaaacgactgcggcacttcgcagggctac
tcgatgaaggccctggtggaaggcggcgaagtcatcgaaccgttgcgcgaccgtatcctc
ggtcgtgtggcggcggtggacatcgtcaatccggacacccaggaaaccgcgatcgacgcc
ggcacgctgctggacgaagacctggtcgacatgatcgaccgcatcggcgtggacgaggtc
aaggtgcgtacgccgctgacctgcgaaacgcgtcatggcctgtgcgcgcactgctacggt
cgcgacctgggccgcggctacatggtcaacgtgggcgaagccgtcggcgtcatcgcggcc
cagtccatcggggaaccgggcacgcagctcacgatgcggaccttccacatcggtggtgcg
gcctcgcgttcggcgctggccagcgcggtggaaaccaagtccaacggtacggtcggtttc
gccagcaccatgcgctacgtcaccaacgccaagggcgaacgagtggcgatctcgcgttcg
ggtgaaatcgcgatctacgacgacaacggacgcgagcgcgaacgtcacaagatcccgtac
ggcgcgaccgtgctggtcggcgatggcgaaggcgtcaaggccggcgcccgcctggcgacc
tgggacccgctgacccgtccgatcgtttccgagtacgccggccaggtgcgcttcgaaaac
atcgaggaaggcgttaccgtcgccaagcaggtggacgaagtcaccggcctgtcgacgctg
gtcgtgatcacgcccaagacgcgcggcggcaagatcgtcatgcgtccgcagatcaagctc
atcaacgagaccggcgaggaagtgaagatcgccggcaccgaccactcggtgaacatctcg
ttcccggtgggtgcgctgatcacggtgcgtgacggccagcaggtggcggtcggcgaagtg
ctggcccgtatcccgcaggaatcgcagaagacccgcgacatcacgggcggtctgccgcgc
gtggccgagctcttcgaagcccgttcgcccaaggacgccggcatgctggccgacgtcacg
ggtacggtctcgttcggcaaggacaccaagggcaagcagcgtctggtcatcaccgacctg
gaaggcgtcagccacgaattcctgattcctaaggaaaagcaggtgctggtgcacgacggc
caggtggtgaacaagggcgagatgatcgtggacggcccggccgacccgcacgacatcctg
cgcttgcagggcatcgagaagctggcgacctatatcgtcgacgaggtccaggacgtctat
cgcctgcagggcgtgaagatcaacgacaagcatatcgaggtgatcgtccgccagatgctg
cgtcgcgtgaacatcgtcgatgccggtgatgcggagttcatcccgggtgaacaggtcgag
cgttcggagctgctgaacgaaaacgatcgcgtggttgacgaaggcaagcgtccggccatc
tacgacaacgtgcttctcggtatcaccaaggcttcgctgtcgacagactcgttcatctcg
gctgcttcgttccaggaaaccacgcgggtcctcaccgaagccgccatcatgggcaagcgg
gacgacctgcgcgggctgaaggaaaacgtcatcgttggccgactgatcccggcgggtacc
ggcctggcctatcaccttgcccgcaaggacaaggaagcgctggaagcggccgaacgcgaa
gccgcgcgccagctggccaatcctttcgaggagccggctgtcacgataggttcggaccac
gaaggcgaaagcgcgccggaggccagcgaaggaccgatcgccgagtaa
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integrated database retrieval system
