Bordetella flabilis: BAU07_25795
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Entry
BAU07_25795 CDS
T04592
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAU07_25795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfz03021
]
BAU07_25795
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_25795
Enzymes [BR:
bfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAU07_25795
Transcription machinery [BR:
bfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAU07_25795
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAU07_25795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
ANN80075
UniProt:
A0A193GJQ5
LinkDB
All DBs
Position
complement(5780006..5784118)
Genome browser
AA seq
1370 aa
AA seq
DB search
MPYSYTEKKRIRKSFAKREDVQNVPFLLATQLQSYLTFLQADTPASQRANDGLQAAFTSI
FPIVSHNGMARLEFVSYVLGEPVFDVKECQQRGLTYASPLRAKVRLVLLDREVSKPTVKE
VKEQEVYMGEIPLMTGTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDVLFFRVDRRRKMPVTILLKAIGMTPESILAEFFDFDRFELKSEG
AMMEFIPERWKGEMARFDITDRSGKVIVEKDKRINAKHLRDLAAGGIERISVPEEFLYGR
VLSKNIVDADTGEVVAHANDEITESVLSALRAANVSEFHTLYTNDLDRGPYISQTLRTDE
TADQMAARVAIYRMMRPGEPPTEEAVEALFQRLFYSEETYDLSRVGRMKVNSRLGRGDDI
TGPMTLTNDDILATIKVLVELRNGRGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSMALYARLNEYGFLETPYRKV
IDGKVSDQIDYLSAIEESHYVIAQANAALDEEGRFVDDLVACREAGETMLTSPSNVHYMD
VAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGIERTVAVDSGT
TVQALRGGVVDHVDADRIVIRVNDDENVAGEVGVDIYNLIKYTRSNQNTNINQRPIVRRG
DQVAKGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIE
ELTVVARDTKLGPEEITRDISNLAETQLNRLDDSGITYIGAEVGPDDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTREGIVRDKRAQSIIDDELR
RYRQDLNDQLRIVENDQFDRIEKMLINKPVNGGPRKLAKGATITKAYLADLDRWQWFDIR
LADEQHALVLEQAKESLEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMIKVYLAVKRRLQ
PGDKMAGRHGNKGVVSRITPVEDMPHMADGTPVDIVLNPLGVPSRMNVGQVLEVHLGWAA
KGVGQRIGDMLRDERTAQAKSLRNYLEKVYNTTGTGARVADLTDEEVIEMARNLKEGVPF
ATPVFDGATEDEIGKMLELAYPDDVAKRMQLTDSRTQAWLFDGRTGEKFERPVTVGYMHY
LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLT
VKSDDITGRTKVYENIVKGDHVIDAGMPESFNVLVKEIRSLALDMDLERN
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgccttactcgtacaccgaaaaaaagcgcatccgcaaaagcttcgcgaagcgtgaggac
gtacagaacgtccccttcctgctggcgacgcagcttcaatcctacctaacttttctgcag
gcggatacgcctgcgtcgcagcgagccaacgatggtctgcaagcggcgttcacgtcgatc
ttccccatcgtcagccacaacggaatggcgcgtctcgaattcgtcagctatgtgctgggc
gagccggtgttcgatgtcaaggaatgtcagcagcgcggcctgacctatgcgtcgcctctg
cgtgccaaggtgcgcctggtcctgctcgatcgcgaagtcagcaagccgaccgtcaaggaa
gtgaaggagcaggaagtctacatgggcgaaattccgctcatgacgggcacgggctccttc
gtcatcaatggcaccgagcgcgtcatcgtatcgcagttgcaccgttcgccgggcgtattc
ttcgaacatgatcgcggcaagacgcacagctccggaaaactgttgttttccgcgcgcgtg
attccttaccgcggctcctggctggatttcgaattcgatccgaaggacgtgctgttcttc
cgcgtcgaccgtcgccgcaagatgccggtcaccattctgctcaaggccatcggcatgacg
ccggaatcgatcctggccgagttcttcgacttcgatcgattcgagctcaagagcgaaggc
gcgatgatggaattcatccccgagcgctggaagggtgaaatggcccgtttcgacatcacc
gaccgctccggcaaggtgatcgtcgagaaggacaagcgcatcaacgcgaagcacctgcgc
gacctggccgcgggcggcatcgagcgcatctccgtgcccgaggagttcctgtacggccgc
gtgctgtccaagaacatcgtcgacgccgacaccggcgaagtcgtcgcgcacgcgaacgat
gaaattaccgaaagcgtgctgagcgcgctgcgggccgccaacgtcagcgaattccatacg
ctgtacaccaacgacctggaccgtggtccgtacatttcgcagaccctgcgcaccgacgaa
accgccgaccagatggccgcgcgcgtggcgatctatcgcatgatgcgtcctggcgagccg
ccgaccgaggaagcggtcgaagccctgttccagcgcctgttctacagcgaggaaacgtac
gacctgtcgcgcgtcggccgcatgaaggtcaacagccgcctgggccggggtgatgacatc
accggtcccatgacgctgaccaatgacgacatcctggccaccatcaaggtgctggtcgag
ctgcgtaacggtcgcggccagatcgacgatatcgaccacctgggcaatcgccgcgtgcgc
tgcgtgggcgaactggccgaaaaccagttccgcgccggcctggtgcgcgtcgaacgcgcc
gtcaaggaacgtctgggccaggccgagacggaaaacctgatgccgcacgacctgatcaac
tccaagccgatttccgcggcgatcaaggagttcttcggttccagccagctgtcgcagttc
atggaccagaccaacccgctgtccgagatcacgcacaagcgccgcgtctcggcactggga
ccgggcggcctgacgcgcgaacgcgcgggcttcgaagtgcgcgacgtgcatcccacgcac
tacggtcgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctgatcaactcc
atggcgctgtacgcgcgcctgaacgagtacggcttcctggagacgccctatcgcaaggtg
atcgacggcaaggtcagcgaccagatcgactacctgtcggctatcgaggaaagccactac
gtcatcgcgcaggcgaacgcggcgctggacgaggaaggccgtttcgtcgacgacctggtg
gcctgccgcgaagcgggcgaaaccatgctgacctcgcccagcaacgtgcactacatggac
gttgctccgtcgcagatcgtgtcggtcgctgcctcgctgattccgttcctggagcacgat
gacgccaaccgcgcgctgatgggcgccaacatgcagcgccaggccgtgccttgcctgcgt
cccgaaaagccgctggtgggcacgggtatcgaacgcaccgttgcggtcgactcgggcacc
accgtgcaggcgctgcgcggcggcgtggtggaccacgtcgatgcggaccgcatcgtgatc
cgcgtcaacgacgacgagaacgtcgccggcgaagtgggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtcccatcgtccgtcgcggc
gaccaggtcgccaagggcgatgtgctggccgacggcgcgtcgacggacctgggcgaactc
gccctgggccagaacatgctgatcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgagcgcgtcgtggccgatgaccgctatacctccatccacatcgag
gaactcacggtcgtcgcccgcgataccaagctgggaccggaggaaatcacgcgcgacatc
agcaacctggccgagacgcagctgaaccgcctggacgattccggcattacgtatatcggc
gccgaagtcggccccgatgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgcctgaagaaaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacctcgctgcgcgtgccctcgggcatgaccggcacggtgatcgacgtccaggtcttc
acccgtgaaggcatcgtgcgcgacaagcgcgcccagtccatcatcgacgatgaactgcgc
cgctatcgccaggacctgaacgaccagctgcgcatcgtcgagaacgaccagttcgatcgt
atcgaaaagatgctgatcaacaagccggtcaacggcggtccgcgcaagctggccaagggc
gcgaccatcaccaaggcctatctggccgacctggatcgctggcagtggttcgacatccgc
ctggccgatgaacagcacgccctcgtgctggaacaggccaaggagtcgctcgaacagaag
cgccaccagttcgacctggccttcgaggaaaagcgcaagaagctgacgcagggcgacgaa
ctgccgccgggcgtgctgaagatgatcaaggtgtacctggccgtcaagcgtcgcctgcag
cctggcgacaagatggccggtcgtcacggcaacaagggcgtggtgtcgcgcatcacgccg
gtggaagacatgccgcacatggccgacggtacgccggtggacattgtgctgaacccgctg
ggcgtgccttcccggatgaacgtcgggcaggtgctcgaagtccacctgggctgggctgcc
aagggcgtgggccagcgcatcggcgacatgttgcgcgatgagcgcaccgcccaggccaag
tcgctgcgcaactatctggaaaaggtctacaacacgaccgggaccggcgcacgcgtggct
gacctgaccgatgaggaagtcatcgagatggcgcgcaacctcaaggaaggcgtgcccttc
gcgaccccggtgttcgacggcgcgacggaagacgaaatcggcaagatgctggagctggcc
tatcccgacgatgtcgccaagcgcatgcagcttaccgattcgcgcacgcaggcgtggctg
ttcgacggccgtaccggcgagaaattcgagcgcccggtcaccgtcggctacatgcactac
ctgaagctgcaccacctggtcgacgacaagatgcacgcccgttcgaccggcccgtactcg
ctcgttacccagcaaccgctgggcggcaaggcgcagttcggcggccagcgtttcggggaa
atggaagtgtgggcactcgaagcctatggcgcttcctacaccctgcaggagatgttgacg
gtcaagtccgacgacatcaccggccggaccaaggtttacgagaacatcgtcaagggcgac
cacgtcatcgatgccggcatgccggagtccttcaacgtgctggtcaaggagatccgttcg
ttggccctggacatggatttggagcgtaactaa
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integrated database retrieval system
