Borrelia garinii subsp. bavariensis: BG0233
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Entry
BG0233 CDS
T00194
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bga
Borrelia garinii subsp. bavariensis
Pathway
bga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG0233 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bga03021
]
BG0233 (rho)
03019 Messenger RNA biogenesis [BR:
bga03019
]
BG0233 (rho)
Transcription machinery [BR:
bga03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BG0233 (rho)
Messenger RNA biogenesis [BR:
bga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BG0233 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
DUF1269
AAA_25
OB_RNB
NB-ARC
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AAU07087
UniProt:
A0A7I6GVW3
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All DBs
Position
complement(234544..236091)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNVGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASNVTKSADLSSAKDSNG
VLFSEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatgttggatttgatttggaaagtgaaataaggcggttggatgtttct
aaagagtttaaaattgaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctgcatctaatgtgacaaaatctgcagatttaagtagcgcaaaggattcaaacggt
gtattattttctgaatttgattatgatattcccgcttcaggtttagaaaataacattaaa
actttagagcaaagcaatatcataaagttttttaatggtaaagattatgtagagattgaa
aaactttatgataagccaattacagaggttagaaaaattgttgagggtcttgggaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtaaaaatatta
agtgagaataatattaatgttttatttacaggcgtgcttgatgtgcttagtgatggttat
ggctttttaagaactgcatcgaattcttatctttcaggaggtaatgatgtttacgtttct
ccttctcagattagactttttaatttaaggactggtgatattttatatggccaaattaga
tcgcctagagatggtgagagattttttgctatggttaaaattaaatctatcaataatcaa
gatcctacatttgctcaaaacagaataccttttgataatttaactcctctttatcctaat
attaaattgaatcttgaatatgaaaattgtaatatttctacaagacttattaatcttttt
tcacctataggcaagggacaaagagctttaatagtttctcctccaaaagcgggaaagact
accttgcttcaaaaaatagctaatgcaataactactaattattcggatgttattttgatg
atattgcttattgatgagaggccagaagaagttacagatatgattcgtagtgttaaaggc
gaagtgattgcatctaattttgatgaacaggctagcaggcatgttcaggtagcagaaatg
gttattgaaaaggcaaaaaggcttgttgaaaacaaaaaagatgttgttattttacttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggtggggtagattctaatgctcttcataaaccaaagaggttttttggatctgctaga
aatattgaggaaggcggaagtttaactattatagctactgctttggttgatactggaagc
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagatagaagacttttccccgctattaatattaaaaagtcaggtacc
agaaaagaagagttactgttaagtgaagaggagcgttctaagattttacttattagaaga
atactcggaggcgttgatgattatgagggagttgaagttctaatagaaaagatgaaaaaa
agcaaaaataatgagatttttttaaagactatgagcaatggtaattaa
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