KEGG   Borrelia garinii subsp. bavariensis: BG0514
Entry
BG0514            CDS       T00194                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bga  Borrelia garinii subsp. bavariensis
Pathway
bga03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BG0514 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bga03021]
    BG0514 (rpoA)
   03400 DNA repair and recombination proteins [BR:bga03400]
    BG0514 (rpoA)
Enzymes [BR:bga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BG0514 (rpoA)
Transcription machinery [BR:bga03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BG0514 (rpoA)
DNA repair and recombination proteins [BR:bga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BG0514 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_5 RAD51D_N ApoB100_C
Other DBs
NCBI-ProteinID: AAU07353
UniProt: Q661B8
LinkDB
Position
510137..511171
AA seq 344 aa
MPVEKFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAI
TAMRIQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKNIHLKLGEGEQRKIISFSVSG
KDTKVLKASHFERDGVEVFNRDLVIATLSQDVNLDLEFQINYGRGYVSSEQNSKYLEEVN
VIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIIREFLF
PLIDFEDNINTSFEKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLSSYQLFLGMSKEDALFVLSKNVKISE
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcctgtagaaaaatttttgaaagattttactatacctgaaaaaattgaatttttgaaa
agccaagatgatggatcttatggtaaatttacgatatatccttttgaaagaggttttgga
gttactataggtaatactttaagacgcgtgttgctttcttctattgaagggtatgcgatt
actgctatgagaattcagtctaacaataaagactcttcgtcaaaggttgtttcaagtgaa
tttgatttgattcctggagtttctgaagatactcttgaggtcattgctaatattaaaaat
atccatttgaaacttggagaaggagagcaaagaaagataataagctttagtgttagcggt
aaagatactaaggttttgaaagcttctcattttgaaagagatggcgttgaggtttttaat
agagatttagttatagctactttatcacaggatgtgaatttagatcttgaatttcaaatt
aattatggtagaggctatgtgtcttctgagcaaaattccaagtatttagaagaagttaat
gttattgctttagattctatattttcgcctatagagaaagtttcatactctgtagaagat
actagggttgggcaaaggtcagattatgacaagcttgtaatggaaatttggaccacaggc
gtgatttctgccaaagatgcaataaaaaaagccgcatcaataataagagagtttttattt
cctcttatagattttgaagataatattaatacatcttttgagaaatcaaaatcagaaagt
tctaacttacttgatatgagtattgaaaaattggatttgtcagtcagatctttaaattgt
ttagctaaagaaaatgttagaactttaggggaacttattagtaaaaatgcagaagagctt
tctaaggcaagaaattttgggaaaaaaagtttagaagagataattgaaaaacttagttct
tatcaattgtttttaggaatgtctaaagaagatgctttatttgtattgagtaagaatgtt
aaaatatcggaataa

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