Borrelia garinii subsp. bavariensis: BG0514
Help
Entry
BG0514 CDS
T00194
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bga
Borrelia garinii subsp. bavariensis
Pathway
bga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BG0514 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bga03021
]
BG0514 (rpoA)
03400 DNA repair and recombination proteins [BR:
bga03400
]
BG0514 (rpoA)
Enzymes [BR:
bga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BG0514 (rpoA)
Transcription machinery [BR:
bga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BG0514 (rpoA)
DNA repair and recombination proteins [BR:
bga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BG0514 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
ApoB100_C
Motif
Other DBs
NCBI-ProteinID:
AAU07353
UniProt:
Q661B8
LinkDB
All DBs
Position
510137..511171
Genome browser
AA seq
344 aa
AA seq
DB search
MPVEKFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAI
TAMRIQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKNIHLKLGEGEQRKIISFSVSG
KDTKVLKASHFERDGVEVFNRDLVIATLSQDVNLDLEFQINYGRGYVSSEQNSKYLEEVN
VIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIIREFLF
PLIDFEDNINTSFEKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLSSYQLFLGMSKEDALFVLSKNVKISE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaaaaatttttgaaagattttactatacctgaaaaaattgaatttttgaaa
agccaagatgatggatcttatggtaaatttacgatatatccttttgaaagaggttttgga
gttactataggtaatactttaagacgcgtgttgctttcttctattgaagggtatgcgatt
actgctatgagaattcagtctaacaataaagactcttcgtcaaaggttgtttcaagtgaa
tttgatttgattcctggagtttctgaagatactcttgaggtcattgctaatattaaaaat
atccatttgaaacttggagaaggagagcaaagaaagataataagctttagtgttagcggt
aaagatactaaggttttgaaagcttctcattttgaaagagatggcgttgaggtttttaat
agagatttagttatagctactttatcacaggatgtgaatttagatcttgaatttcaaatt
aattatggtagaggctatgtgtcttctgagcaaaattccaagtatttagaagaagttaat
gttattgctttagattctatattttcgcctatagagaaagtttcatactctgtagaagat
actagggttgggcaaaggtcagattatgacaagcttgtaatggaaatttggaccacaggc
gtgatttctgccaaagatgcaataaaaaaagccgcatcaataataagagagtttttattt
cctcttatagattttgaagataatattaatacatcttttgagaaatcaaaatcagaaagt
tctaacttacttgatatgagtattgaaaaattggatttgtcagtcagatctttaaattgt
ttagctaaagaaaatgttagaactttaggggaacttattagtaaaaatgcagaagagctt
tctaaggcaagaaattttgggaaaaaaagtttagaagagataattgaaaaacttagttct
tatcaattgtttttaggaatgtctaaagaagatgctttatttgtattgagtaagaatgtt
aaaatatcggaataa
DBGET
integrated database retrieval system