Borrelia garinii subsp. bavariensis: BG0620
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Entry
BG0620 CDS
T00194
Symbol
rep
Name
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bga
Borrelia garinii subsp. bavariensis
Pathway
bga03420
Nucleotide excision repair
bga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG0620 (rep)
03430 Mismatch repair
BG0620 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bga03400
]
BG0620 (rep)
Enzymes [BR:
bga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG0620 (rep)
DNA repair and recombination proteins [BR:
bga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG0620 (rep)
MMR (mismatch excision repair)
Other MMR factors
BG0620 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_12
UvrD_C_2
AAA_30
DEAD
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAU07456
UniProt:
A0A7I6GWL8
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All DBs
Position
634435..636411
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AA seq
658 aa
AA seq
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MPDDFFKNSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQKEILALT
FTNKAANEMKDRIKKILKNPLSNLMISTFHAFGLFFLKENYKLLGYKKNFSIYDDNDRIS
LLKEILLDEGLFNKKVSLSSLSNAISLLKNGILTFDDLKEEDIHIFRLYEDRLRLYNSFD
FDDLILKPKELLSNNSDIRSKYSKRYKYVLIDEFQDTSLLQYNFIRLLINHSNLCCVGDD
DQSIYSWRGASYNNILQFEKDYSAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWS
SKMCSKVIDVFMFDDEIQESEFVASQIIELSRIEGFKSKKIGVIMRTNALFRNVEMIFKR
QGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINVPRRGIGKEYLKKIRDI
ADKKGCCIYDALCDIVFSFTSTSSYDKALNKQVIESIEDFVSFIEEYQYKFSITKNTYSN
IIKEMIESIEYWGFLVNENPNSIKVAEYKYQNIEGFLSIIKNWESKQFGELRDLSSFLNY
ILLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEESEIGLEEER
RVFYVALTRAKDSLIITMANKRKKDRQIFDQLPSRFISEIPKEFLNFNYYADFSKNKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgatgatttttttaaaaattctctaaatcaatttcaatatgaagcggttaccact
attgagggtgctcttttaattattgctggtgctggcagtggaaaaacaagggttgttact
catagaatagcttatttgcttctaaaaggcattgctcagaaggaaattttagccttaact
tttactaataaggcggctaatgaaatgaaagatagaattaaaaaaattttgaaaaatcct
cttagcaatcttatgatctcaacttttcatgcttttggacttttctttttgaaagaaaat
tataagttgttaggatataaaaaaaactttagcatttatgatgataatgatagaatttct
cttcttaaagagattttacttgatgaaggtctttttaataaaaaagtttctttaagttcg
cttagcaatgctatttcacttttaaaaaatggtattctcacttttgatgatttaaaggaa
gaagatatacatatttttagactttatgaagatcgattaaggctttataattcttttgat
tttgacgatttaattttaaagccaaaagaattgttaagtaataattctgacattagaagt
aaatattctaaaagatataagtatgttttgattgacgagtttcaagatacttctttgctt
caatataattttattcgccttttaataaatcatagtaatttatgttgcgttggggatgat
gatcaatcgatatattcttggcgtggggctagctataacaatattttgcaatttgaaaaa
gattacagtgctaaagaaataaagcttgaacaaaattatcgttctgcaaaaaatatttta
gatgttgccaattctgtgattttaaataataaaaatcgaaaggaaaagaccttatggtct
tcaaagatgtgtagcaaagttatagatgtttttatgtttgatgatgagattcaagaatct
gagtttgttgcaagtcaaataatagagctttcaaggatagaaggttttaaatctaaaaaa
ataggagttattatgagaactaatgctctttttagaaacgttgagatgatttttaaaaga
cagggcataaaatataaggtttcagggggaacatcttttttccagagaaaagaaataaaa
gatattatttcttatttaaatgtaataataaatcctaaaagtgattatgatttgcttaga
attataaatgttccaagaaggggaattggcaaggaatatttgaaaaaaattagagatata
gcagataagaaaggttgctgtatttatgatgctctttgtgatattgttttttcttttaca
agcacttctagttacgacaaagctttaaataagcaggtcattgaaagtatagaagatttt
gtgtcttttattgaagagtatcaatataaatttagtataacaaaaaacacttattctaat
ataatcaaagaaatgatagaaagtattgaatattggggatttctagttaatgaaaatccc
aattcaattaaagtggctgagtataaatatcaaaatatagaagggtttttaagtataatt
aaaaattgggaatccaagcaatttggcgaattgagagatttaagcagttttttaaactat
atacttcttcaatctaatgaagttagtgaggaatctgaaaatattaatattaatttaatg
acagtgcattctgctaaaggtttagaatttgattatgtattttttattgctgttgaagac
aatattattccgcatcatagaataattgaagagagcgagattggtttagaggaggaaagg
cgagttttttatgttgcattaactcgtgcaaaagattctcttattattactatggccaat
aagcgaaaaaaagataggcaaatttttgatcagctgccttcaagatttatttcagaaatt
cctaaagaatttttaaattttaactattatgcagatttttctaaaaataaagcttga
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