Borrelia garinii subsp. bavariensis: BG0853
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Entry
BG0853 CDS
T00194
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bga
Borrelia garinii subsp. bavariensis
Brite
KEGG Orthology (KO) [BR:
bga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bga03032
]
BG0853 (topA)
03400 DNA repair and recombination proteins [BR:
bga03400
]
BG0853 (topA)
Enzymes [BR:
bga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BG0853 (topA)
DNA replication proteins [BR:
bga03032
]
Prokaryotic type
DNA Topoisomerases
BG0853 (topA)
DNA repair and recombination proteins [BR:
bga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BG0853 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AAU07675
UniProt:
A0A7I6GX35
LinkDB
All DBs
Position
complement(874521..877070)
Genome browser
AA seq
849 aa
AA seq
DB search
MQNKKLIIVESPTKAKTIKKFLDDSFLVEACIGHIVDLPNNAKEVPKEYKKYEWANISID
YNNGFNPIYIIPSNKKPIVSKLKKLVKTINEIYLATDQDREGETIAFHLKEVLKIKNYKR
MIFHEITETAITESLKNTRNIDINLVNAGETRRILDRLYGYTISPLLWKKVAYGLSAGRV
QSVGLKLLIEKEKTRINFKKANYYSISLQCKHEKKDLLLETKLEEIDDKNIAESKDFINE
TGKLKNSDKAIIITQDLMIELEKELKNGQKIELISIETKKIKISPPKPFTTSTLQQEINK
RLKIGTKQIMQHAQKLYEHGYITYMRTDSHNIAKIARDKIIKIIKNKYGKEYVEGKDRIY
EKEKMTQNAHEAIRPSEMFIPNENIEIEGKTAKEIYKIIWDRTIISGMKDAIKENIKLTF
KYKNLIFKSSFTKVIFDGFLKHTKEKDEYPNINFDLMKKGDIFYIVKMKTSEHETKAPFR
YTEASLVQKMEKEGIGRPSTYSTIISTLLEREYAFKLNNTLIPTVKGAAVINLLEKYFPV
LIELNFTSNMEEKLDKIAIGKLDKIKYLSKFYNGKKGLKDTVMQLEPKINSSEFRTVIQS
QNVENKDNNINYTINIGKYGPYLIFKGHNYSINTTTPLENLYKKDEIEKIINEKELKPNI
LGVDPLTGLNVIFKNTIYGNIVQLGEDTYAPQEYTKKGKPKKLKIIKAKKASTKKIDPEN
ITLELALKLLSLPKPIGKHPQSNEQIIAATGVFGDYIKTESGSIACSLKKDVKAYDITLD
RAISLLNERVNKVGIIVKTITFSKNKIGNKIYIYKKNDKFYAKIKRKKIDLPDNINLDEI
NEKYVFSLL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaaaattgataatagttgaatcaccaacaaaagctaaaacaataaaaaag
tttcttgatgactcgttcttagtagaagcatgcattggacatatagtagatctgccaaac
aatgcaaaagaagttcccaaagaatataaaaaatacgaatgggcaaatatttctatagat
tataacaatggatttaatccaatttacattattcctagcaataaaaaaccaattgtatca
aaactaaaaaaattggtaaaaacaatcaatgaaatatatcttgcaaccgaccaagacaga
gaaggagaaaccatagcatttcacttaaaagaagtattaaaaattaaaaattataaacgg
atgatatttcacgaaatcacagaaactgcaataaccgaatcactaaaaaatactagaaat
atagatataaaccttgttaatgctggtgaaactcgaagaatattagaccgactatacgga
tataccatctctccgttactttggaaaaaagtagcttatggactttctgctgggcgagta
caatctgttggattaaaattgttaatagaaaaagaaaaaactagaataaattttaaaaag
gccaattattattcaatttcacttcaatgtaaacacgaaaaaaaagacttactacttgaa
acaaaattagaagaaattgacgataagaatatagcagagagtaaagactttataaacgaa
actggaaaacttaaaaatagcgataaggcaataataataacccaagatttaatgatcgag
cttgaaaaagaattgaaaaatggacaaaaaattgaattaatttcaatagaaactaaaaaa
ataaaaatatctcctccaaagccatttactacatccacacttcagcaagaaataaataag
cgccttaaaattggaacaaagcagattatgcaacacgctcaaaaactttacgaacacgga
tacattacctatatgagaacagactctcataatattgctaaaattgcaagagacaaaata
ataaaaataataaaaaacaaatacggaaaagaatatgtagagggaaaagatagaatttat
gaaaaagaaaaaatgactcaaaatgcacatgaggcaataaggccttctgaaatgtttatt
ccaaacgaaaacatagaaatagaagggaaaaccgctaaagaaatttacaaaataatatgg
gatagaaccattatttctggaatgaaagatgcaataaaagaaaatataaaactgactttt
aagtataaaaacttaattttcaaatcaagttttacaaaagtaatttttgatggatttctt
aaacatactaaagaaaaagatgaatatcctaacataaattttgacttaatgaaaaaggga
gatatattttatatagttaaaatgaaaacaagcgagcacgaaacaaaagctccatttaga
tatacagaagcatctcttgtacaaaaaatggaaaaagaaggaataggtcgtccttcaacc
tattctacaattatatcaacacttttggaaagagaatatgcattcaaactcaacaacaca
ttaataccaaccgtaaaaggggctgctgtaataaatcttcttgagaaatatttcccagta
ctaattgagctaaatttcacctctaatatggaagaaaaattagataaaatagcaatagga
aagctagataaaataaaatatctaagcaaattctataatggaaaaaaagggctaaaagat
acagtaatgcaactagagcctaaaattaattcctctgaatttagaactgttattcaaagt
caaaacgtagaaaataaagataataacattaattatacaataaacattggaaaatatggg
ccttatttaatattcaaaggacataattactcaatcaacacaacaactccattagaaaat
ttgtacaaaaaagatgaaatagaaaaaataataaatgaaaaagaactaaaaccaaatata
cttggtgttgatcctttaacaggacttaatgtaatcttcaaaaatacaatttatggaaac
attgtacaacttggagaagatacttatgctcctcaagaatatacaaaaaagggaaaacct
aaaaaattaaaaataataaaagcaaaaaaagcatcaactaaaaaaattgatcctgaaaac
ataacattagagcttgctttaaaattgctctcactaccaaaaccaatcggcaagcatcct
caaagtaatgaacaaatcattgctgcaactggcgtttttggagattatattaaaactgaa
agcggaagtattgcttgctcgctaaaaaaagatgtaaaagcatatgacataacactagac
agggctatcagcttactcaacgaaagagttaataaagtcggcataatcgttaaaacgatc
acattttctaaaaacaaaattggcaacaaaatatatatttacaaaaaaaacgacaaattt
tatgctaaaattaagagaaagaaaattgatttacctgataacattaatcttgacgaaata
aatgagaagtatgtattcagtttgttataa
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