Bufo gargarizans (Asiatic toad): 122919470
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Entry
122919470 CDS
T07965
Symbol
WHRN
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bgar03037
]
122919470 (WHRN)
Cilium and associated proteins [BR:
bgar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122919470 (WHRN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
CCM2_C
Motif
Other DBs
NCBI-GeneID:
122919470
NCBI-ProteinID:
XP_044124460
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Position
9:173776039..173877861
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AA seq
1007 aa
AA seq
DB search
MNSEAGTLHPFPRGSIHQSLTGSIHSSSSGSINSGDIGRVLSSNVRRLHGALNRLLSEPE
REQLLHCLRLYHSRRNVFDLVRTLRLILRLQDQRQLFPMLRLVIPRSDQLLFDQYTSEGL
YIKDLSPGSPGFSGILCDGISAFSTPISGSAPAFASPLPGKNPAFSIPVTGTAPAFNNSR
QGMVPAFSPSAPGTAPAFSSPSLGPSLVAGTSYPGAPSGLSHQGSSAAGTIPDVRQVVLK
RSKNQEGLGFSIRGGVEHGIGIYVSLIEPGSLAETEGLRVGDQIIKANGRSLDRVTHSEA
VKALRGSQKLVLSVQTSGRVPGGHVSSHIYTWVDPQGRSVSPPAGLPHLHNSSVGVPEKE
KRSHLQLLQEGDEKKVNLVLGEGSSLGLLIRGGSEYSLGIYITGVDHGSEAESSGLKMGD
QILEVNGISFLCIPHDEAVRILRSSRHLMMTVRDVGRIPHSRTVVDETQWLSSSYTGNGD
PLTTTGILRNSSPEPTTKPVFYRGPAGSQVTLSSLGNQTLVLLDEKARLLLTEPERSTMS
YYLQQYKERYIPVQALIIAMFELFNTQAKFALLSELRPQIYPQDLAVFDNMVLKREIETM
KSRHRSGDTISVLSHSPSTSSTESHQTVSTASTARERLLWLLDVMENGADPEGSADSGSL
TRTTLPDISLDDVNSFLDEPPAYRPPPPIPTEEPPAVLRRQSGERAQRPSSGSSQSGLFF
TAPTHPSPPPPSFTSPPTPSPPLPPLTAPPTSPHSQSPNQVIYATVSPKKQSPVSPAAQL
ALVTQLPLTPFPRVQSPTRLKPVVENPPPPSSPSHTDALDPHTGQHFVMVEVHRPNCEPD
VNEIRAVPQTRAVLPTSPPASLSQLSDSGQTLSEDSGVDAGEVGGGSKNSSPQPQKSKGA
ENNAKPPGLLEPSASLVRVMKTAPTLGIAIEGGAKTRQPLPRIVTIQRGGSAHNCSKLRV
GQVILEVNGVSLQDKEHREAARLIAEAFKTKEKDYMDFLVTEFNVSL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagaggcaggtactcttcacccctttccgaggggctccatacaccagtctcta
acagggtccatccattcttcatcttctggctcaattaattcaggggacattggacgtgtc
ctatcctcaaacgtccgtcgactgcatggagccctgaaccgactgctaagtgagcctgag
agggaacagcttttgcactgtttgagactttaccactctcgaagaaatgtctttgacctg
gtgagaacattgcgccttatactgcgtctccaagaccagaggcaacttttccctatgctg
cgtcttgttatcccacggtctgaccagttactttttgaccagtatacatcagaggggttg
tatataaaggatttgtccccaggttctcctggattcagcggaattttatgtgatgggatt
tcggcattcagcaccccaatttcagggtcagctcctgcctttgcctcacctttaccaggc
aaaaatcctgcctttagtatcccggtaaccgggactgctcctgcttttaacaattcaaga
caagggatggttcctgcttttagcccttcagcacctgggacagctcctgcctttagtagt
ccatcacttggtcctagtttagtagctggaacctcatatcctggagcaccatcaggttta
agccaccaaggctcctcagctgccggaaccatacctgatgttcgacaggttgtacttaaa
cgaagcaaaaaccaagaaggacttggcttcagcatccgtggtggtgtggaacatggtatt
ggtatttatgtgtcactgattgaacctggttctttggcagaaacagaaggactgagagtt
ggagaccagatcattaaagcaaatggtcgatcgctggacagagtcacccacagtgaggca
gttaaggctctgcggggttctcagaagctggtcctctctgtgcagacttcaggccgggtc
cctggcggccatgtctctagtcatatttatacttgggttgatccacaaggtcgcagtgtc
tcacctcctgcagggttaccccaccttcacaactcatctgtgggggtcccggaaaaggaa
aagagaagtcatctacagctactgcaggaaggggatgaaaagaaggtgaacctggtgctc
ggagaggggagctctcttgggttgcttatccgtggaggttctgagtattcactggggatc
tatatcacaggagtggatcatggttccgaagctgagagttctggacttaagatgggtgat
cagatcctggaagtaaatggcatcagcttcctctgcatccctcatgatgaggctgtcaga
attcttcgctcttcgcgacatctgatgatgactgtccgggatgtaggtcggatcccacat
tctcgcactgtggtggatgagactcagtggctcagtagctcctacacaggaaatggagac
ccccttacaactacagggatcctaaggaactcctcaccagaacctaccacaaagcccgtt
ttttacagaggacctgcgggatcacaagtcaccctaagcagtctgggaaatcagaccttg
gttcttctagatgagaaggcacgtctgctgctgactgagcctgagaggagcactatgtcc
tactacctccagcagtacaaggaacgttacatcccagtgcaggcccttatcattgctatg
tttgaacttttcaacacccaggccaagtttgcccttttatcggagctacggcctcagatc
tacccacaagacctggcggtgtttgataacatggtgctgaaaagagagattgagacgatg
aaatctcgacatcgttccggagacaccatctctgtcttatcccacagtccgagcacctca
tctacggagagccaccaaactgtcagtaccgccagcactgcacgggaacgtcttctttgg
ctgttggatgtcatggagaatggagccgaccctgagggaagtgcggactctggaagtctg
actcggacaaccctgcccgacatctccctggatgacgtcaattccttcttagacgagccc
cctgcatatagaccacctccccctatcccaacagaggaacctcctgcagttcttcgaagg
cagagtggagaacgagcacagcgtccttcctctgggtcatctcagtccgggctcttcttc
actgccccgactcaccctagtcctcctcctccatcatttacatcacctccaaccccaagc
ccacccttaccccctctaacagcacccccaacgtctcctcattcacagagcccaaaccaa
gtgatatatgctacggtttcacccaaaaaacagtctcccgtaagccctgcggcccagctg
gctctggtcacgcaactacctctgacccccttcccaagggttcagtcaccaactagatta
aagcctgtggttgagaacccccctccgccatcttccccttcgcacacagacgcactggac
cctcacacaggtcaacattttgtaatggtggaggtccatcgacccaactgtgaacctgat
gtgaatgaaatccgagccgttccgcaaactcgagccgtcctgccgacatcgcccccagcc
tccctttcccagctgtcagacagcgggcaaacactcagcgaggacagtggcgtggacgca
ggagaagttggcgggggcagcaaaaacagcagccctcagcctcaaaaatccaaaggggca
gagaacaacgcaaaaccaccaggcctgctggagccttctgcctccttagtgcgtgtaatg
aagactgccccaaccttaggaatagctatcgaaggaggcgccaagacacgacaacctctg
ccacgtattgttaccatccagagaggaggctctgctcataactgcagcaagctccgagtc
ggccaggtcatcctagaggtgaatggagtctccctgcaagataaagaacatcgtgaggct
gccaggctcatcgctgaagctttcaagaccaaagaaaaggattatatggactttctggtc
acagagttcaatgtgtcattgtag
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