Bufo gargarizans (Asiatic toad): 122919481
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Entry
122919481 CDS
T07965
Symbol
LRFN1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bgar04515
]
122919481 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
bgar04990
]
122919481 (LRFN1)
Cell adhesion molecules [BR:
bgar04515
]
Immunoglobulin superfamily
SALM family
122919481 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
bgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122919481 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
fn3
LRR_9
Ig_DSCAM-DSCAML_C
Sp38
C2-set_3
LRRCT
Motif
Other DBs
NCBI-GeneID:
122919481
NCBI-ProteinID:
XP_044124476
LinkDB
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Position
9:complement(5886113..6075760)
Genome browser
AA seq
740 aa
AA seq
DB search
MEKLLCLLLMGALGYVGSAQYCPGRCICQINSPTLTMLCAKTGLLFVPPAIDRKTVELRL
TDNFITIIRRKDFSNMTNLVHLTLSRNTIIQIVPLAFSDLRSLRALHMNSNRLSALRNEH
FRGLGNLRHLILGNNQINSIQPGSFNEFVSTVEDLDLSYNNLEQLPWEDIGQMVNLNTLT
LDHNLIDHIAEGTFTMLHKLVRLDMTSNRLHKLPPDNLFLXSQVMASSRGSSSSLSISFG
GNPLHCNCELLWLRRLTREDDLETCASPEQLTDKYFWSIQEEEFICEPPLITKHYASKQF
VMEGQSVSLKCKAVGDPEPSVHWIGPDGKLIHNTTRMVVHDNGTLDIAITTLKDSGFFTC
IASNAAGETTAPVELAVVPLPLLVNNTAHIKEPDPGSSDITTSTKSGFNDTKNLQDRRIL
VDKLKTTSVVIQWPSQRHIPGIRMYQIQYNSSLDDSLVYRMIPPSNRSFLVNDLAPGREY
DLCVLAVYDDGMTSLTATRVVGCVQFNTKEEGAQCQPLHTQFLGGTMIIIIGGIIVASVL
VFIIILMIRYKVYSGQEESGKARVSNVYSQTNGQQGMACAHSCAKLGENNYEPLPPASKE
PQVEGKDPGKGENQPCSPIPAPLMEMDKRRTKTSSDLQTVALLSSLSGDQTETSALGSTT
SLCLITSEGQAHVGTKAPPRTYQHRFSFDGDYSLFQSHSYPRRARTKRHMSALELHNQEA
DLGHRRVTFSSTEWMLESTV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttgctatgcctgctgctgatgggagctctggggtacgttgggagcgcacag
tattgccccggtcgctgtatctgtcagatcaactctccaactctcaccatgctgtgtgcc
aagacaggacttctcttcgttccaccagccattgaccgaaagacagtagagttacgacta
acagataattttatcaccatcattcgacgcaaggacttcagcaacatgaccaatctggtg
catctgacactgtcacggaatactattatccaaattgtaccactggcgttctccgaccta
cgttctctaagagctttgcatatgaacagcaacagactttccgccctgaggaatgagcat
tttcgtggcttgggcaatctacgccatttaattttaggtaacaaccaaataaattctatc
cagcctgggtcatttaatgagtttgtctccactgtagaggatcttgacttgtcctataac
aacctcgaacaactgccctgggaagacattggccaaatggtgaatctgaacaccttaact
ctagaccataatttaattgaccacattgcagaaggaactttcactatgttgcataagctt
gtgaggcttgacatgacctctaatcgtttgcacaagctgcctccagacaacctttttcta
nagtctcaagttatggccagttcaagaggttcaagttcatctctctccataagctttggt
gggaatcctctacattgtaattgtgagcttttatggcttagacgactgacaagggaggat
gaccttgagacttgtgcctctccagaacagcttacagacaagtatttttggtcaattcaa
gaggaggaatttatctgtgagcctccactcattactaaacactatgccagcaaacagttt
gtcatggaaggacaaagcgtcagccttaagtgcaaagcggtaggagaccctgaaccatca
gtccactggattggtccagatggaaaactaatccataatacaacaaggatggtagttcat
gacaatggaactttagatattgccattacaacactgaaagatagtggttttttcacatgt
atagcatcaaatgcagctggtgagaccactgctccagtggagcttgcagtagtacccctt
ccactgctggtgaacaatacggctcatattaaagaacctgatcctgggtcctctgatatc
acaacttctactaagtctggatttaatgataccaagaatttacaagataggagaattctg
gtggacaagttgaagacaacttcagttgttatccagtggccatcacagcgtcatatccct
gggatccgcatgtatcagattcagtataacagctctttagatgactctttagtgtacagg
atgatcccaccgagtaaccgaagcttcttggtcaatgatttggctcctggacgtgagtat
gacctctgtgtcctggctgtctatgatgacgggatgacttcactaactgctactcgagtg
gtgggatgtgtccagttcaacacaaaagaagaaggtgcgcaatgtcaaccgctccacacc
cagtttcttggaggcactatgatcattatcattggtggaattattgtggcttctgtgttg
gtgtttatcatcatcctaatgatccgatataaagtgtacagtggccaggaggaaagtggc
aaagcaagggtcagtaatgtatattcccaaacaaatgggcaacaaggcatggcttgtgct
cattcctgtgccaagttgggagaaaataactatgaaccattgcccccagcttccaaagag
ccccaagtggagggcaaagaccctggtaaaggggagaaccaaccttgttcacctattcca
gctcctctaatggaaatggacaagaggagaactaagacatctagtgatcttcaaacagtg
gctcttttgtcttctctctcaggagaccagacagagaccagcgcattaggttccaccacc
tcattatgtctgattacttcggaaggacaggcacatgtggggaccaaagctcctcccagg
acttatcaacatagattctccttcgatggagactactctctgttccagagccacagttat
cctcgcagggcacggacaaagagacacatgtccgccttggagttgcacaaccaagaagct
gaccttggacatcgaagagtcacatttagcagcacagagtggatgctagagagcaccgtg
tga
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