Bufo gargarizans (Asiatic toad): 122919862
Help
Entry
122919862 CDS
T07965
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bgar01009
]
122919862 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122919862 (HDAC6)
04131 Membrane trafficking [BR:
bgar04131
]
122919862 (HDAC6)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122919862 (HDAC6)
Enzymes [BR:
bgar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122919862 (HDAC6)
Protein phosphatases and associated proteins [BR:
bgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122919862 (HDAC6)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122919862 (HDAC6)
Membrane trafficking [BR:
bgar04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122919862 (HDAC6)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122919862 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
122919862
NCBI-ProteinID:
XP_044124984
LinkDB
All DBs
Position
9:186863616..186889020
Genome browser
AA seq
1237 aa
AA seq
DB search
MSSPRDHKSPGGQGEGGSPSLSTTKKPGKKGQTSPQGGPSLQEVKKRGHRMRKTPEREIC
DQLDGLHLGTEAPAEGTGLVYDDRMTQFFCLWDDKFPECPTRLLAVKEKLVEYGLLDRCL
PVPAREASEEELLLVHSPDYVELMKSTQKMTEEELRALSDNYDSVYLHPMSFTASRVAAG
SVLQLIDKVMRREVRNGLAVVRPPGHHAHTDQMNGYCMFNHLAIAARYAQHQHGVKRVLI
VDWDVHHGQGTQFIFEDDPSVLYFSIHRYENGEFWPHLAESSSAAVGKEKGERYNINVPW
NKTGMNDADYITTFLHLLLPVSYEFQPQLVLVAAGYDSVVGDPKGEMSATPACFAHLTHL
LMCLAEGRLVLALEGGYNMRSMAEGVCASLKVLLGDPCPSLRQPFTPCESSLQSISGAIS
VHRKYWRCLQDQDFPFKIETGDDKLKTEESSDHSFPEESEEDNLKVTLDTAMQEVMRKLP
ERCTGLVYDEQMMEHYNIWDSGHPELPLRIARIFKHHKEMGLVDRCTRLPHRLATTKELQ
MCHSLPYIKKIEESSRMKPRDLHRMGSQYNSIYINNRSYNSARLAAGSTFSVVEAVLRGE
VQNGVCIVRPPGHHAEPGAACGFCFFNNVALAARYAQSLQSPSDPPLRVMILDWDIHHGN
GTQHIFQDDASVLYVSLHRYDNGIFFPSSEDAAHDKVGSGPGEGFNVNIPWNGGKMGDAE
YLLAFHRIVMPIAYEFNPQLVLVSAGFDAARGDPLGGCCVSPEGYAHMTHLLMGLAGGKV
VVVLEGGYNLMSISESMSMCTRTLLGDPLPFISDLHAPRPAALRAISSVLGVHQKYWRSL
RINVRPPVPSEEASEVLFSPPKMQPHKDGETGLSSPQHRSPGKQIVYTPSPPRPDLRGQE
EEHLTPKQRPSLSTIVSSESAEAGSPEVRTLVIQDVDDSKKDSILEDLGGDLVTSPSQVP
MRDCSVSSLSAQDEDSCAKPDQSYEGESLELVIELQVSDQTPEKQRSKPATESSVEELLR
DLHLGDDTKSVDVRSPDNDSKPVGGARKKTFHGKIVRRNADMGPCVHSSWPKTRTTMNFG
KTPVRYFGWAESAGKQWDLAPPDEAAAGDRLFCEVDMDPSLGFSGELFTVTPLPWCPHLD
SVQALPSGGLDVTEPCAECGTQVENWVCLTCYQVLCGRYVSQHMMCHGVSCGHDVVLSFS
DLSVWCYSCDAYIHNEVLIPAKQSAYRSKFGEDMPGV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcctcgagatcataagtcacccggaggtcaaggagaaggtggctcccccagt
ctctctactacgaagaagcctgggaagaaggggcagacatcgcctcaaggtggccccagc
ctacaggaagtaaagaagaggggccaccgcatgaggaaaactcccgaaagagagatttgt
gaccaattggatggattgcacctgggtacagaggctcctgcagaaggaaccggcctggtg
tatgatgatcgaatgacacaatttttctgtctctgggacgacaagtttcccgagtgtcca
actcgtcttttggctgtgaaggagaagttggtggagtacgggctgctggaccgctgcctg
ccagtgccagcacgagaagcatctgaggaggagctcttgctggttcacagcccagactac
gtagagttaatgaaatccacccagaaaatgacagaggaagagctcagagcactgtcggac
aactacgactctgtctacctgcacccaatgtcgttcactgcttcccgtgtggccgccggg
tctgtactacagctaatcgataaggtcatgagaagggaagtccgaaatgggttggcagtg
gtgaggcctccggggcaccacgctcatactgaccagatgaatggttactgcatgtttaac
cacttggccatcgccgccagatacgcccagcaccagcacggtgtaaagagggttctcatt
gtggactgggatgtacatcatggacaaggcacgcagttcatatttgaggacgacccaagt
gtcctttatttttcaatccatcgctatgaaaatggagaattttggccacatctggcggag
tcttccagcgctgccgtgggcaaggagaagggcgagcgatataacataaatgtgccgtgg
aataagacgggaatgaatgacgcggattatatcacaaccttcctgcacctgctcctgccc
gtctcctacgagttccagccgcagcttgtgttggttgctgcaggatacgactcagtggtc
ggagatcctaagggggagatgtccgccacgccagcatgctttgcacaccttacccacttg
ctcatgtgtttggctgaaggaagactggtgctcgctctggagggaggttacaacatgcgc
tctatggcagaaggtgtctgcgcctcattgaaagtgctgctcggggacccatgtccgagc
ttacgtcagcctttcacaccctgtgagagttctctgcagtccatctctggcgccatatct
gtccacaggaaatactggcggtgtctgcaggaccaggattttccctttaagatcgagaca
ggagatgataaactaaaaacagaggaaagcagtgaccactccttccccgaggagtcagaa
gaggataacctgaaggtcaccttggacactgcgatgcaggaggtgatgaggaagttaccg
gagcggtgcacgggtctggtgtatgatgagcagatgatggagcattataacatatgggac
agtggtcaccctgagctcccgctgagaattgcgcggattttcaagcatcacaaggagatg
gggctcgtagatcgctgcactcgtcttccccatcgccttgccactactaaggagctacag
atgtgtcatagcctcccttacattaagaagattgaagaaagctcacgaatgaaaccaaga
gacctgcacaggatgggctctcagtacaactccatctacatcaacaacaggtcgtataac
agcgcccgcctggccgcgggctctacgttcagcgtggtggaggccgtattgaggggagag
gtccaaaatggagtttgcatagtccgccctccgggtcaccatgcggagccaggtgcggcc
tgtgggttttgcttctttaacaatgtcgccttggctgcgcgatacgcccaaagtctgcag
agcccgtcggaccctcctctaagggtgatgattttggactgggatatccaccacggtaac
ggtactcagcatatattccaggatgatgccagcgtcctgtatgtgtcgctccatcgctat
gataacggcatcttcttcccatcttctgaggacgccgcacacgacaaggtcgggagcggt
ccaggcgaaggatttaatgtgaacatcccctggaatggaggaaagatgggagatgcggag
tacctgctcgccttccacagaatcgtcatgcccatagcttacgagtttaatccacaactc
gttttggtctctgccggattcgacgccgctcgtggtgacccgcttggaggttgctgcgtc
agtccagaaggctacgcccacatgacgcatctcctgatggggctggcagggggcaaggta
gtggtagtgcttgagggcggatataaccttatgtcgatctctgaatccatgtccatgtgt
acccggacactgctgggtgatccacttcccttcatatctgacctgcacgccccccgtcct
gcagccctgcgtgctatctccagtgttcttggagtacatcagaaatattggcgtagcctg
cgtataaacgttagacctcctgtaccttctgaggaggcctcggaggtcctgttctcccca
ccgaagatgcagccacataaggatggggagactggattatcatcacctcaacacagaagt
cctggaaagcagattgtatatactccttctcctccgagaccagatctaagggggcaagaa
gaggaacatctgacaccaaagcaaagaccatcactatcgaccatcgtcagcagtgagagt
gcagaggctggctctccggaagttaggactttggtgatccaggatgtagatgacagtaag
aaggactccatattggaggaccttggaggagatttggttacgtctccttctcaagtgcct
atgagggactgttcagtctccagtctttctgctcaggacgaggacagttgtgccaaacca
gatcagtcatatgaaggagaatcgctggaactggtcattgagctgcaggtgtctgaccag
accccagagaagcagaggtctaaacctgcgactgagagctcagtggaggagcttttgaga
gacttgcacttgggagacgatacaaaaagtgtagacgtcaggtctccagacaatgatagc
aagccggtcggtggagcaaggaagaaaaccttccatgggaagatcgtcaggaggaatgca
gatatggggccctgcgtccattcttcatggcccaaaaccagaaccacaatgaattttggc
aaaacaccagtcagatattttggatgggccgagtctgcaggtaagcagtgggatctggcg
ccgcccgatgaagctgctgcaggtgatcgtttgttctgtgaagtggacatggacccatca
ctcggattctctggggaattatttaccgtaacacccttgccctggtgccctcacttagat
tcggtacaagcgctgccctctggtgggctggacgtgacagagccgtgcgcagagtgtggc
acccaggtggagaactgggtctgtctgacgtgttaccaggttctgtgcggaaggtacgtc
tcgcagcatatgatgtgtcacggagtctcctgcggccatgatgtcgtcctcagcttctcg
gacctctccgtgtggtgctatagctgtgacgcctacatccataacgaggttctcattcca
gcgaagcaatccgcttaccgttccaagtttggtgaggatatgccaggagtctaa
DBGET
integrated database retrieval system
