Bufo gargarizans (Asiatic toad): 122919948
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Entry
122919948 CDS
T07965
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122919948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122919948
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122919948
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122919948
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Thymopoietin
Motif
Other DBs
NCBI-GeneID:
122919948
NCBI-ProteinID:
XP_044125132
LinkDB
All DBs
Position
9:complement(194652500..194666819)
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AA seq
294 aa
AA seq
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MAVDMRLPAARKRVNEGLEAADKSWHLVSPGDTITTDTGFMRGHGTYMEEDKLLASVAGV
VERVNKLICVRALKTRYNGEVGDIVVGRITEVQQRRWKVDTKSRLDSVLLLSSVNLPGGE
LRRRSAEDELAMRSYLQEGDLISAEVQAVYSDGALSLHTRSLKYGKLGQGVLVQVSPSLI
KRRKTHFHNLPCGASVILGNNGFIWLYPTPEQTEEEAGGFITNLEPLPLSDREVISRLRN
CILALSSQKMLLYDTSILYCYEASLPHQIKDLLKLEVMEDIVLETRQRLVEQEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatatgaggctgccggctgctcggaaacgagtgaatgaggggctggaggct
gcggacaagagctggcacctcgtgtctcccggggacaccatcaccacggacaccggattc
atgagaggccatgggacgtacatggaggaagacaagctgttagcgtccgtagctggagtg
gtggagagagtcaacaagctgatatgtgtccgagccctgaagacgagatacaacggagaa
gttggtgacattgtggtgggccgaataacagaggtgcagcagaggcggtggaaagtggac
actaagtcgcgcctggactccgtgttgctgctgtcctctgttaaccttcctggcggggag
ctgaggaggaggtcggctgaggatgaactggccatgaggagctacctgcaggaaggagat
ctcatcagtgcggaggtgcaggcggtgtactctgacggagcgctgtccttacacactcgc
agtctgaaatacgggaagctcggacagggcgtcctggtgcaggtgtcgccatcgctgata
aagaggcgcaagactcacttccataacctcccctgcggagcctccgtcatcctggggaac
aatggtttcatttggctctacccgaccccggagcagacagaggaggaagccggggggttc
atcactaatctggagccgctgccgctctctgatcgggaggtgatctctcggctgaggaac
tgcatcctggcactgagctcgcagaagatgttactgtacgacaccagcatcctgtactgc
tacgaagcctccctgccgcaccagattaaggatctcctgaagctggaggtgatggaagac
atagtgctggagaccaggcagcgtcttgtggagcaggaggggtag
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