Bufo gargarizans (Asiatic toad): 122920111
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Entry
122920111 CDS
T07965
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bgar03036
]
122920111 (TDRD12)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
122920111 (TDRD12)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122920111 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122920111
NCBI-ProteinID:
XP_044125255
LinkDB
All DBs
Position
10:117374411..117418507
Genome browser
AA seq
1619 aa
AA seq
DB search
MLSLSVLKVVDPSCFFCRTLGDGEEYERLFAQLNFLYSTAYRDVEELKPAALPVGALCVV
FNQEMKSWCRAILESSTCMAQDELVDCFLLDYALFCPITKKNIRFPVEECRNLPFRARKF
KLHHIQPISLRFNVFENKLEMGQVKRWDTAAIDYFRQLLSVAAKIEAQLCSVENNCMAVY
LFVTTADSVICVNDDLVVKKYACYEKGNPNDKIENGRVGIFSAPTRQNSCISATDVTETS
PLRGREAAIHSSSDAGSLQSEKEKSLNPLSKYQMSVCENGRAMSPPQDQPQTLSNCPKFK
VVTSPDPLLHPVQSKAEPAHRPHTEAPIAPTFAGTIREAAIHSSSDAGSLQNEKEKSSNP
LSKYQMSVCENGRAVSPPQDQPQTLSNCPKFKVVTSLDPFLHPVQNQAEPAHRPHTEAPI
APTFAGTIREAAIQSSSDAGSLQSEKEKSSNPLSKYQMSVCENGRAVSPPQDQPQTLSNC
AKFKVVTSPNPFLHPVQNQAEPAHRPHTEAPMAPTFAGTIREEKPNQTLEEMSQTECDTE
VQSNPAPFMWPAYSKRDARRRLSTEITEKSLTKVGSVGENEPILRKEVDKKKDLVRLLQF
LSPTPRELLEMEPAKPLKITNPESAIFVSKCLVPCYTLEEMSLCTHIKKGLLMCGYDGPN
QTESYCWAPIAEGFDTIVICPDGSNPIYYIPPLLSYLNCASLLYKLLPAKHGPLAVIICP
GWNKAHLVYNLLLDLSKYTRLLSPMLLLVGLKNEDLENINFRRQCDVVVTTPHSLLRCLA
HHGRLLLRLCNLVFDEVDVLFSKAGSEISEILQIYKKIVSVENRDGTPQQIVAVGSKWTH
DMQLVLQYMATPRIVITKMEQAAVFANVQQVIQLCLDCDKMSVLTHCLDFTPVKVQKILI
FTKNNEEAELVHKAVQTASLYSLLLHSSLVHKFSHILEQWKRSSGLRTVVVLVVTDDYVP
LLEITDATCVIHYSFPENVGVLNLRLFSLLEYIQCSIDKISMQKDDHLRAKSVILMTEKH
ASFAIDLLKSMKQAQAEVPPALIAHAQGLLQSWENKKRDQELCPYLKSFGYCKQDDGMCP
LRHHINPSVDFHCGEATIPESDQYITVVPLCIVDAARFRGRVVTKNDPYNTLAAELNEYY
RSPNNKEPVRQVECKHLYAISDGSDYYRVQVLSTKTMDTVLFAHIQYVDDGRTDVIPVHT
LFLLPVAFQSVPAQFREFIVCRVKPLDNEDTWDPKVTKMITKSVRGKQHRAKVVLHLGKT
YWLDPMVQVTRLSDLASCVYDLNVRQEILSTGLGTDNPQHILQLKALLEPSRSSQTSANR
KEEDVVPENDPAYTFNRKEEDVVPENDPAYTFTRKEEDVVPENDTAYTFTRKEGVVPEND
TAYTFTRKGEDVVPENDTAYTFTRKEEDVVPENDTAYTFTRKEEDVVPENDLADRSPCLK
NTDSGNEKITRADLLPHPNDERQSFPVSGDSEHLRTLPSASLFPEVKWFEKNDSVTLTVK
LRQVTEPKCTFYSDRLVFSCYAGGKHYVADMELYKDIVADKSECTVKNGEAVITVQKSKA
ELWDRVLKLKHRNVSFDFDRFEDVEEIKGSNLGLDMPKKFYNVISEDLTSSEYSSSDSD
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctgtcagtactgaaggtggtggacccaagctgcttcttctgcagaaccctg
ggtgatggcgaggagtacgagcggctgtttgcccagctgaatttcctgtacagcacagca
tacagagatgtggaggagctgaagccggcggcgctgcccgtgggggcgttatgtgtagtt
ttcaatcaagaaatgaagagttggtgccgggccatcctggaatcctccacttgtatggcg
caggatgagctggtggattgtttcctcctggattatgccctgttctgtcccattacgaag
aaaaacattcggttccctgtggaggaatgccggaatctcccatttcgtgcaaggaaattt
aagttgcaccacattcagccaatatctctccgcttcaatgtcttcgaaaataaactagaa
atgggacaggtaaaaagatgggacactgctgcaatcgattacttcaggcaattgctaagt
gtggccgccaagattgaagcccagctttgctcagtggagaataactgtatggccgtgtac
ctgtttgtgactactgcagactcagtgatttgcgtcaatgatgatctagtggtcaaaaag
tatgcgtgctatgagaagggaaatcccaacgacaagattgaaaatggcagagtcggtata
ttctcagcaccaactcggcagaattcatgcatttctgctacagatgtgactgagacgagt
cctctccgtggaagggaggcagccattcattccagcagtgatgctgggtctttacagagt
gaaaaagaaaagtcattaaaccctttgagcaaatatcaaatgtctgtatgtgagaatgga
cgtgcaatgtctcctccacaagaccagccacaaactttgtcaaactgtcccaaatttaag
gttgtgaccagtcctgaccctttgctccatcccgtccagagcaaggcagaaccagcgcac
aggcctcatacagaagctccaattgctcctacatttgctgggacgatcagggaggcagcc
attcattccagcagtgatgctgggtctttacagaatgaaaaagaaaagtcatcaaaccct
ttgagcaaatatcaaatgtctgtatgtgagaatggacgcgcagtgtctcctccacaagac
cagccacaaactttgtcaaactgtcccaaatttaaggttgtgaccagtcttgaccccttc
ctccatcccgtccagaaccaggcagaaccagcgcacaggcctcatacagaagctccaatt
gctcctacatttgctgggacgatcagggaggcagccattcaatccagcagtgatgctggg
tctttacagagtgaaaaagaaaagtcatcaaaccctttgagcaaatatcaaatgtctgta
tgtgagaatggacgcgcagtgtctcctccacaagaccagccacaaactttgtcaaactgt
gccaaatttaaggttgtgaccagtcctaaccccttcctccatcccgtccagaaccaggca
gaaccagcgcacaggcctcatacagaagctccaatggctcctacatttgctgggacgatc
agggaagaaaagccaaatcagacactagaagagatgtcacaaacagaatgtgataccgaa
gtgcaatctaaccctgccccgtttatgtggcctgcatattccaaaagagatgcaagacgt
cggctgtctaccgagatcactgagaaatccttgacaaaagttggctcagttggtgagaat
gagcctatactaagaaaagaagttgacaagaagaaagacttggtgagacttctccagttt
ttaagtcctacacctcgagagttactggaaatggaacctgcgaagccgctgaaaataaca
aatccagagagcgccatatttgtgagcaaatgtctagtgccatgttacaccctggaggag
atgtccctgtgtacccatattaaaaagggactgctcatgtgtggctacgatggacccaat
cagaccgagtcctactgctgggcgcctatagccgaggggtttgatacaatcgtaatctgt
cctgatggatccaatcccatatattatatccctcctcttctgagttatctgaactgtgcg
tcactgctgtacaaactgctgccagctaaacacgggcccctcgcagtgattatctgtcct
ggatggaataaagcccaccttgtgtataacctgctgctggacctcagtaaatacacgcgg
ctcctgagccccatgctgctcttggtcgggcttaaaaatgaagatcttgagaacataaac
ttcagaaggcaatgtgacgttgttgtcactaccccgcatagtttgctgaggtgtttggca
catcatggtcgtctcctccttcgcctgtgtaatctggtctttgatgaagtggacgtgctg
ttctccaaagcgggatccgagatttctgaaatacttcagatctataagaaaatagtgagc
gtagagaacagggacggcacgcctcagcaaattgtggctgttggaagcaaatggacccat
gacatgcagcttgtactgcaatacatggcaactccacgcattgtgatcaccaagatggag
caggcagcggtctttgccaatgtccagcaggtcatccagctttgccttgactgtgacaaa
atgtcagtattgacgcactgtttagacttcacaccagtcaaggtgcagaaaatcctcatt
ttcaccaaaaataatgaagaagctgaattagtgcataaggccgttcagaccgcctcactg
tacagtttattgctgcatagtagtcttgtgcataagttcagtcatatcttagagcagtgg
aagaggtcgtcaggtctccgaacagtcgtggtcctggtggtcacagatgactatgttcct
ctcctggagatcacagacgccacatgcgtcattcattacagttttcctgaaaatgtcggc
gtcttaaatctccgcctgttttctttgctggagtatattcagtgcagcattgataagata
tcgatgcagaaagatgaccatttgagggccaaatctgttattctgatgaccgagaaacac
gcaagcttcgcaattgatttattgaagagcatgaagcaagcacaggccgaagtcccgcct
gcactcatcgctcatgctcagggattgttacagagctgggaaaacaagaagcgggatcag
gagctctgcccttaccttaaatcctttggctattgcaagcaagatgatggtatgtgtcct
cttcggcatcatattaacccctcagtggactttcattgtggagaagccaccattccagag
agtgaccagtatataacggtcgtccctctctgtattgtggatgcagctcgattccgtggt
cgtgtagtaaccaaaaacgatccatacaatacacttgctgcagaactcaatgaatattac
aggtcaccaaataataaagagccagtgcgccaagtggagtgcaaacatttgtatgccata
agtgatggctcagattattacagggtacaggttttatctacaaaaacaatggacaccgtc
ttgttcgcacacattcagtacgtcgatgacgggcggacagatgtgattcccgtccatacg
ctattcctgctgccagttgcctttcagtcagtccctgcacagttcagggagttcattgtg
tgtagggtgaaacctcttgacaatgaagatacgtgggatccaaaagtgacaaaaatgatt
accaaaagtgtcagagggaagcagcacagagctaaagtcgttcttcatcttggaaaaacg
tactggctggatcctatggtgcaggtgactcgattgtcagatttggcatcctgcgtatat
gaccttaatgtacggcaagaaatcctatccacaggactgggtacagacaaccctcagcac
attcttcaactgaaagctctgctggagcccagcagatcctcacaaacgtctgccaatagg
aaagaagaagatgtagtacccgagaacgatccggcatatacttttaacaggaaagaagaa
gatgtagtacccgagaacgatccggcatatacttttaccaggaaagaagaagatgtagta
cctgagaacgatacggcatatacttttaccaggaaagaaggtgtagtacctgagaacgat
acggcatatacttttaccaggaaaggagaagatgtagtacctgagaacgatacggcatat
acttttaccaggaaagaagaagatgtagtacctgagaacgatacggcatatacttttacc
aggaaagaagaagatgtagtacctgagaacgatctggcagatcgttctccatgtctgaag
aatacagattctggcaatgagaagattaccagggctgacctcttgccccatcctaatgat
gaaaggcaaagctttcctgtgagtggggactctgaacatctaagaactctcccctccgca
agtttatttccagaagtgaaatggtttgagaagaacgattctgtgaccttgaccgtaaag
ctgagacaagtgaccgagcccaagtgcaccttctacagcgaccgactcgtcttcagttgc
tatgctggaggaaagcactatgtcgcggatatggagctctacaaggatatcgtagcagac
aaatcggaatgcacagtgaagaacggagaagccgtaatcaccgtccagaagagtaaagca
gaattgtgggacagagtattgaagcttaaacatcgaaacgtgagctttgattttgaccgc
tttgaagacgtggaggaaatcaaggggagtaatttaggattggacatgcctaaaaagttt
tacaatgtgatcagcgaagacctgacgtcctcggaatacagcagctccgacagtgattag
DBGET
integrated database retrieval system
