Bufo gargarizans (Asiatic toad): 122920188
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Entry
122920188 CDS
T07965
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122920188
Spliceosome [BR:
bgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122920188
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
HAT
TPR_MalT
TPR_21
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
122920188
NCBI-ProteinID:
XP_044125396
LinkDB
All DBs
Position
10:complement(38912740..38997269)
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AA seq
734 aa
AA seq
DB search
MADRRRFQAGFSAGSLFSSSQSSQDCDVLTTEDCSGSDEDETKDSDMVGMPPAFRSYWKA
AITKPSNFTAWTKLVAYSEKEKHLAACRKAFDAFLTYFPLSHIYWKKYADIEQHFGIVEE
VEKIFTRAVKSNPLNVALWTSYILFLLKKVNTKLPNSDEKLRGLYVYRVFKEAVDACGME
FHSDDFWSLYIEYEIKHNNFKEAVALYDRVLNIPTQQYEMHFERFKILVSSRSPAEYLTT
EEIIAIHLKIQTENYHDQIAVEDLPSDDITDSLSETDLQNIRQHLLDTRKQMYLLNEIQV
KKRSTFEEGIKRLYFFASPVNVKQLRNWRKYLDFERSEGQHERIVMLYERCLMPCAMYEE
FWLSYAKYMEEHSVEAARSVFERACRIHLPLKFTLHLQWALFEEKLGQLDSARAIMCNLE
KVLPGVVMVRLRRVNFERRNGNLQEAERLLSEAVQNSSGTEMATFYAVKLSRLLLKLKKD
PEKARDVLVDALKKDPNSPYLHQCLLEVEMARDDVDSVMHCVKRALNSNIHDAIKGILSQ
RRLEFLEDCGDNIKSLLNAYDEHQTLLEQEEFKRKAVHDENEEEKKKKAKTQSDSASVED
NISTSGIMPHAAASEAPLSSNQSVSTTNTTESSTPQTIVNTPKSTNYVQYKPTPSPRGKV
PVPRPTVRPYIPPHRAPIPPLMPSFFGGSVPPPRLSFPPPIPPVPPYTYGPWMQNYMGYR
SPQPWNYNRFYTPF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggaggtttcaggccgggttttctgcagggtccctgttttcttctagc
cagtcttcccaggattgtgatgtcctcaccactgaggactgttcaggaagtgatgaagat
gaaaccaaagattcagatatggttggaatgcccccagcattcagaagttactggaaagca
gctataaccaaacccagtaatttcaccgcatggactaaacttgtagcatattcagagaaa
gagaaacacttggcagcttgtagaaaagcttttgatgccttccttacttatttcccactt
tctcatatttattggaagaagtatgccgacatagagcagcattttggaattgtagaagag
gttgaaaagatctttactcgtgccgtgaagtcaaacccactgaatgtggccttgtggaca
agctacatcttattcttgttaaagaaagtgaatacgaaactgccgaattctgatgagaag
ttacgaggtctgtatgtttacagggtgttcaaggaagctgttgatgcctgcggcatggag
ttccactcagacgatttctggagcctttacatagaatatgagataaaacacaacaatttc
aaagaagccgtggcgctgtacgatcgtgtcctgaatatccccactcagcagtatgaaatg
cattttgaaaggtttaaaatactagtatccagccgctctcctgctgaatatttgaccacg
gaggagatcatcgcaatacacttgaaaatacagactgaaaattatcacgatcagatcgct
gtggaggacttaccatccgatgacatcacagactctctgtcggaaaccgatctgcagaat
atccgccagcaccttctagatacaaggaaacagatgtaccttttgaatgaaatacaagtc
aaaaaacgttctacgtttgaagaagggatcaagcgtttgtatttctttgcatcaccagta
aatgttaagcagcttcgaaactggaggaaatatctggattttgagaggtctgagggtcag
catgaacgcatagtcatgctgtatgagcggtgtttgatgccatgtgcaatgtatgaagaa
ttctggctctcgtatgctaagtatatggaagaacattccgtggaagctgcccgttctgta
tttgagagagcctgtcggatccatttgccactgaaatttacactacatcttcagtgggct
ttatttgaagaaaagcttggacaactggattctgctcgagccattatgtgcaacctggag
aaggtgttacctggagtggtcatggtgcgcctaaggcgtgtgaactttgaacggcggaat
ggaaatctgcaagaggcagagagattactcagtgaagctgtccaaaacagctcgggcaca
gaaatggcaacattttatgccgtgaaactttctcgactacttctaaagctgaagaaagat
ccagaaaaggccagagatgtactggttgacgctctcaagaaggatccgaatagtccttac
ctgcatcagtgcctgctggaggttgagatggccagagatgatgtggatagtgtgatgcat
tgtgtgaaaagagccctgaacagcaacatccacgatgctattaaggggatattgtcacag
agacgtctagagttcctggaagactgcggcgacaatattaaaagtttacttaatgcctac
gatgagcatcaaacactactggagcaggaagagttcaagagaaaagctgttcatgacgag
aacgaagaagaaaagaagaaaaaagctaaaacccagtctgacagcgcctcagtagaggac
aatatttccacctcaggaattatgccgcatgcagccgcatctgaagcacctttatcatca
aatcaaagcgtttctacaactaatacaacagagtcatctacacctcaaactattgtaaac
accccaaaatccactaactatgtccagtataaacctacccctagtccaaggggtaaggtt
cctgtaccaagacctacagtacgaccatatatacctcctcacagagcaccaatcccacct
ttgatgccctcgttttttggaggttctgttcccccaccaagattgtcttttccaccacct
atacctcctgttcctccctacacttatggaccatggatgcagaactatatgggatacagg
agcccacagccttggaattacaacagattttacacacccttttga
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