Bufo gargarizans (Asiatic toad): 122920444
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Entry
122920444 CDS
T07965
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122920444 (IGHMBP2)
03012 Translation factors [BR:
bgar03012
]
122920444 (IGHMBP2)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122920444 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
122920444 (IGHMBP2)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
Other ribosome biogenesis factors
122920444 (IGHMBP2)
Translation factors [BR:
bgar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122920444 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
AAA_22
ResIII
nSTAND3
DEAD
AAA_16
Helicase_RecD
SLFN-g3_helicase
IstB_IS21
UvrD-helicase
Flavi_DEAD
AAA
PhoH
Zot
SRP54
AAA_25
ABC_tran
ATPase
UvrD_C_2
AAA_31
Motif
Other DBs
NCBI-GeneID:
122920444
NCBI-ProteinID:
XP_044125876
LinkDB
All DBs
Position
10:complement(21455634..21518535)
Genome browser
AA seq
982 aa
AA seq
DB search
MEEFVKTQLELLQEEREAEIEEARAWQENVSLKELQRKGVCLLKLQVANQRTGLYGRLLV
TFTPRKYDTEAVLPTNRFGSGDIVGLYDSSAPKEAISTGIVSGITQKTITVAFDEVQGDS
LNLGSEATYRLLKLANDVTYKRIKQALTALGQYRCGPASDLVDVLFSLSQPNSIRLSRPL
EFLNPALDNSQKEAVVFSLTQREVAVIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN
VAVDNLVEQLARYKEKILRLGHPSRLLESLQHHSLDAVLARSDNAQLVADIRKDIDLAFA
KMRKLQNRDEKSGFKTEIRALRKELKKREEAAMIETLKSANVILATNTGATPDGPLKLLP
ENYFDLVMIDECAQALEASCWIALLQAKKCILAGDHKQLPPTIISHKAAAKGLSRSLMER
VIEKYGDRVVRMLTVQYRMHDRIMQWASRALYSGKLESHSSVAHHLLKDLPGVAVTEETS
IPLLLIDTAHCGLFEIDIEDEQSKGNPGEVRLVDLHVQALTNAGMKARDIAVIAPYNLQV
ELLRQCLRPRYPDLEIKSVDGFQGREKEAVILSFVRSNTKGEVGFLAEERRINVAVTRAR
RHVAVICDSHTVGNNKFLKDLVTYFTEHGEVRTAFEYLDDIIPEKYSHDGESSCKAETNV
KKDNNAKSKKTGPPKAGGQKSSSTAESQPKGVGKAKTADSAGTKKKNMNLDVQAEDASNK
DKLRKTILEFVEDKSKTHLTFPSTLTSHDRLLVHQIAEEYGVQHISTGDGSNRCISLTKT
KAISAVSESQTMNDSTDQKHLQSQTVEKTSKQKEVSRGESASNADLKLLHMERMQREKAK
LEEKRKKEVTEKKKSESKSKIDIKPKAENLDTDNFDALIAAVVKADSTCGFAKCKSSVVT
VGDFCIHCNKRYCLSHHIPEVHGCGDRAKAKARTRISREGVIYAGSGYKDHSIDPTKKAH
LQRRLDKKINELTNQRKVKKEK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatttgtcaaaactcagcttgaacttttgcaagaggaaagagaggccgaaata
gaagaggccagagcctggcaggagaatgtgtccttaaaggaattacagcggaaaggagtc
tgcctactgaagctgcaggtagcaaaccagagaacggggctgtatggacgcctgctcgtg
accttcacaccgcggaagtacgacaccgaggcggtgctgcctactaaccgctttggctca
ggtgacattgtaggactctatgactccagtgcgccaaaggaagccatctccacagggatc
gtgtctggcattacacagaagactatcactgtggcctttgatgaagttcagggggattcg
ttaaatctgggcagcgaagccacctacaggcttctgaaattagccaatgatgtcacctat
aaaagaatcaaacaagctctgactgctttgggtcagtaccgctgcggaccagcaagtgac
ttagtagatgtcctcttcagtttgtcccaacctaatagcattaggctatcaagacctctg
gaatttctcaatccggccttggacaattcacagaaggaggctgtcgttttctccctgacc
cagagagaagttgctgttattcacgggccccctggcactggcaagacgacaaccgtggtg
gaaattatcttacaagctgtgaagcaggggctgaaggtcctgtgctgtgcaccatctaat
gtcgctgtggacaacctggtggagcagttggctaggtacaaagagaagatattacgtctc
ggtcatccatcaagacttctggaatccttacagcatcattctctggatgcggttttggcg
cggagtgataatgcacagctagtggctgacatccgcaaagatattgacctggcctttgca
aaaatgagaaaactgcagaacagagatgaaaagagcggcttcaaaacggaaatccgagcg
ctgcgaaaagagctgaagaaaagggaagaggcggccatgatagagacgttgaaatctgcc
aatgtcatccttgccaccaatacaggtgctaccccggatggtcctctgaagctgcttcct
gagaattactttgacctggtcatgattgatgagtgcgctcaggcgttagaagcgagctgc
tggatcgcgctgctgcaggcgaaaaagtgtatcctggccggtgatcacaagcagctccca
cccaccatcatctcacacaaggctgcagctaagggtctgtcccggagtctaatggaacgt
gtaatagagaagtatggagaccgagtggtgagaatgctgaccgtgcagtatcgcatgcac
gaccgtataatgcagtgggcgtcacgtgcactttacagtgggaagctggaatcacattct
tctgttgcccatcatttactcaaggatttaccaggggtggcagtgacggaagagactagt
attcccttactgctgatcgatactgcccactgcggactgttcgagatagacattgaagat
gagcagtccaagggcaatccaggtgaggtgcgtctggtggatctacacgttcaggcgctg
accaacgctggcatgaaagcccgtgatattgcggttatagcgccgtacaatcttcaggtg
gaattgctcagacagtgtctccggcccagatatccagatctagaaatcaaatctgttgat
ggctttcaaggaagagagaaagaagccgtcatattatcctttgtcagatccaacaccaaa
ggtgaagtaggatttttggctgaagaaagaaggataaacgtagccgttacccgcgctcgc
cgtcatgtggctgttatttgcgattcccacaccgtcgggaacaacaaatttctcaaggac
ctggtgacttactttactgagcatggagaagtccggactgcatttgaataccttgatgac
atcatccccgagaagtattcccatgacggtgaaagttcttgtaaggccgaaacaaatgtt
aaaaaagacaataatgctaagtcaaaaaagactggccctccaaaagctggaggccaaaaa
tccagtagtaccgcagagagtcagccaaagggggttggcaaggcaaaaactgcggactct
gccgggactaaaaagaagaatatgaacttagatgtacaggccgaagatgcttccaataag
gacaagctaaggaagacaattcttgagtttgtagaagataagagtaagactcacttaacg
ttcccttcaacactaacctcacatgatcgattgctggtccaccagattgcagaagaatat
ggagtgcagcacataagcaccggagatggcagtaatagatgtatttccctcaccaaaacc
aaagcaatttcagctgtttctgaatctcagacaatgaatgactccaccgatcagaaacat
ttacaatcgcagacagtggagaagacctcaaagcaaaaagaggtcagccgaggcgagtct
gcaagcaatgctgatctgaagcttctccatatggagaggatgcagagggagaaagcaaaa
ctggaagaaaagaggaaaaaagaggtcacagaaaagaagaaatcagagtctaaaagtaaa
attgacataaaacccaaagcagagaacctggacacggacaactttgacgcgctgattgcg
gctgtggtgaaagcggacagcacttgcggttttgctaaatgcaagtccagcgttgtcacg
gtgggggacttctgcatacactgcaataagcgctactgcctcagtcaccatattccagag
gttcacggctgcggtgacagagccaaagcaaaagcacgaacaagaatcagccgcgaagga
gtgatttatgcaggaagtggctacaaagaccactcaatagacccaaccaagaaagcccat
ttacagagaagactcgacaagaaaattaatgaattaacaaaccaaagaaaagttaagaag
gaaaaataa
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