Bufo gargarizans (Asiatic toad): 122920626
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Entry
122920626 CDS
T07965
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgar04131
]
122920626 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bgar04147
]
122920626 (COPB1)
Membrane trafficking [BR:
bgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122920626 (COPB1)
Exosome [BR:
bgar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122920626 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
HEAT_EZ
Cnd1
MMS19_N
Caudo_TAP
Motif
Other DBs
NCBI-GeneID:
122920626
NCBI-ProteinID:
XP_044126218
LinkDB
All DBs
Position
10:13404493..13417795
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEITLKTDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLDHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIFNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPSHERVLQDLVMDILRVLGTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAVQRFDNLRTLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKDDIQSVMTEVR
RSLGEVPIVENEIKKESGEMKPEEEVTVGPSQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVPDKKKQNSFVAESMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECTPLMNEIFNQKCRLSLSHMLSAKLEEEKLSQKKESEK
RNVMVQADDHISFMQLTAKSEMASKEDQFQLSLLAAMGTTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDTEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKSTV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaatgtgtgctacaccctcatcaacgtccccatggactcggagcct
ccatcagagatcaccctgaagaccgacctggagaagggggatgtgaaatccaagacggag
gctctgaagaaagtgatcatcatgatcctgaatggcgagaagctgcccggactcctgatg
accatcatccgcttcgtgctgccgctgcaggatcacaccatcaagaaactgctgctcgtc
ttctgggagatcgtgcccaagacgacgccggacgggaagctgctgcaggagatgatcctc
gtgtgcgacgcctacaggaaggatctccagcatccaaacgagttcatccggggatccact
ctgcgcttcctgtgtaaactgaaggaagccgagcttctggagccgctgatgcccgccatc
cgggcgtgtctggatcaccgccacagctacgtgaggaggaacgccgtgctggccatatac
accatctacaggaattttgagcatctgatcccagacgctcctgagctcatccatgacttc
ctggtgaacgagaaggacgccagctgcaagaggaacgccttcatgatgctgatccacgca
gaccaggaccgcgctctggattatctcagcacctgtatcgatcaggtccagacctttggt
gacatcctgcagctggtgattgtggagctcatctacaaggtgtgtcacgccaacccctcc
gagagagcgcgcttcatccgctgtatcttcaacctgctgcagtcatccagcccagctgta
aagtatgaagccgccgggaccctcgtcacactgtccagtgctcccaccgccatcaaggct
gcggctcagtgctacatcgacctgatcattaaggaaagcgacaacaacgtgaagctgatc
gtcctggaccgcctgatagagctcaaggaccacccgtcacacgagcgtgtcctgcaggat
ctggtcatggacatcctcagagtcctcggcacgccagacctggaagtgcgcaagaaaacc
ctgcagctggcgctggacctggtgtcttcaagaaacgttgaggagctggtgattgtcctg
aagaaagaagtcataaagaccaacaacgtgaccgagcacgaggacacagacaagtaccgc
cagctgctcgtccggacgctgcactcctgcagcgtgcgcttcccagacatggccgccaac
gtcatccctgtgctgatggagttcctgagtgacagtaatgaggcggccgccgctgacgtc
ctggagtttgtgcgagaagcggttcagaggttcgataacctgaggacgctgatcgtggag
aagatgctggaggttttccacgccattaagtccgtgaagatttaccggggagcgctgtgg
attttgggagaatactgcagcacaaaagacgacatccagagcgtgatgacggaagtgcgc
cggtccctaggcgaggtcccaattgtggagaatgagattaaaaaggaatccggagaaatg
aagccggaggaggaggtaactgtgggccccagtcagaagctggtgaccgagatgggcacg
tacgccacccagagtgcactcagcagctcccggcccaccaagaaggaggaggagaggcca
cctctccggggatttctactggacggagatttctttgttgccgcttctctcgccaccacc
ctgaccaagatcgctctgcgctatgtggctttggttccagacaagaagaagcagaattcc
tttgtggcagagtccatgcttctcatggcgaccatcctgcatctgggcaagtcctctctc
cccaagaagccgatcacagatgatgacgtggaccggatctcgctgtgtctgaaggttctg
tccgagtgcacccccctgatgaatgagatcttcaaccagaaatgccgcctgtccctgtcc
cacatgctgtccgccaagctggaggaggagaagctgtctcagaagaaagaatctgaaaaa
cgaaacgtgatggttcaagcagacgaccacatctccttcatgcaactgaccgccaagagt
gagatggcatcaaaggaggatcagttccagctaagtctcctggcggccatgggaacgaca
cagaggaaagaggcggcagatccgctggcatccaagctgaacaaggtgactcagctgacg
gggttctcggatccggtgtacgcagaggcctatgtgcacgtgaaccagtatgacatcgtc
ctggatgtgttagtcgtcaatcagaccagcgacaccctgcagaactgtaccctggagctc
gccacgttgggggatctgaaacttgttgaaaagccgtcgcccctcaccctcgcccctcat
gactttgcaaacatcaaagcaaacgtaaaagtcgcttcaactgaaaatggaattatattt
ggaaacattgtgtatgacgtgtccggagcagcaagtgacaggaactgcgtggtcctcagc
gacatccacatcgacatcatggattacatccagcccgccagctgtacggacacggagttc
cggcagatgtgggcggagttcgaatgggaaaacaaggtcactgtcaacaccaacatcata
gatctgaacgaatatctgcagcacatcctgaagtccacaaacatgaagtgtctgacgcca
gagaaggcgctgtccggttactgcggcttcatggccgccaatctgtacgctcgctccata
ttcggtgaggacgctctcgccaatgtcagcatagagaagcctatccaccttggacccgac
gctccagtgaccggtcacatacggatcagagccaagagtcagggcatggcgctgagcctc
ggtgacaagatcaacctgtctcagaagaagtccactgtatag
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integrated database retrieval system
