Bufo gargarizans (Asiatic toad): 122920629
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Entry
122920629 CDS
T07965
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04120
Ubiquitin mediated proteolysis
bgar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122920629 (SYVN1)
04120 Ubiquitin mediated proteolysis
122920629 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122920629 (SYVN1)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122920629 (SYVN1)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122920629 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
YqgC
zf-HC5HC2H
zf-C3H2C3
Endonuclease_7
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122920629
NCBI-ProteinID:
XP_044126222
LinkDB
All DBs
Position
10:complement(39436561..39464565)
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AA seq
614 aa
AA seq
DB search
MLQGPSPPLSAKMRTAVMTGASLALTAAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQ
AFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTL
LLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDVLFVSHAYHSLVTRGAS
VQLVFGFEYAILMTMILTVFIKYVLHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMA
FMTIMVKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDN
VCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQTQPPADQP
DPAQQPHAAPAQQTPVLPPPPNFPPGMLPPFPPGMFPLWPPVGPFPPAPGASAPEEASAG
PSTASAPRPSDASNTGGPDSSAGTSLPGFPFPPPFLGMPLFPPFGLPPMPMPPAGFAGMT
EEELRAMEGHERQNLESRLQCLQNIHTLLDAAMLQINQYLTVLATIGPPRPPVPSTPSPL
VTTDAVVSSSQPEETPTSDTPSADPDPSQSVPEESTSEEMINDSEAGTSTEEPDAVELRR
RRLQKLETGTSESQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagggtccctccccgcccttgagcgccaagatgaggacagcagtgatgacgggt
gccagcctggcacttacagctgcggtggtggctcacgcttattacctcaagcaccagttc
tacccaacagttgtttatctgaccaagtccagtcccagtatggctgtgctttatatacaa
gcgtttgtcctagtcttcctcctaggaaagttcatgggcaaggtattttttggtcagttg
agagcagctgagatggagcacctcctggagcgctcgtggtatgcagtcacagagacctgt
ctggctttcactgtcttcagggatgacttcagcccacgttttgtggccctcttcacactc
ctactgtttttaaagtgtttccattggttggctgaggaccgtgttgattttatggagcgc
agtccgaacatttcctggttatttcatttccgtattcttgcactgatgctcctgctgggt
gtgctggatgttctctttgtgtctcacgcttaccacagtttggtcaccagaggggcctcc
gtgcagctggtatttggatttgagtatgcaatactaatgacgatgatcctcacagtcttc
ataaagtatgtcctgcactctgtggaccttcagagtgagaatccatgggacaataaagct
gtatacatgttatacactgaactactgacaggctttataaaggttttgctgtacatggcc
ttcatgacaatcatggttaaagtccacacattcccactatttgcaattcggccaatgtat
ctggcaatgaggcagtttaagaaggctgtcactgatgccatcatgtcaagaagagcaatc
cgcaatatgaacacattgtatccagatgctacaccagaggagctgcaggcaatggacaat
gtgtgcatcatctgcagggaggagatggtgacaggagctaagagacttccctgcaaccac
atcttccacaccagctgtctgcgttcttggttccaaagacagcagacttgtcccacatgt
agaatggatgtcctcagagcttctctgcctactcaaactcagccacctgcagatcagcct
gaccctgcccagcagccccacgcagcacctgcacaacagactccagttctcccaccacca
cctaacttccctccagggatgctcccaccattccctcctggaatgtttccactttggcct
ccagtgggtccttttccaccagctcctggagccagtgcccccgaagaagccagtgctgga
ccctccactgcatctgctcctaggccttctgatgcatctaacactggtggtcctgattca
tcagctgggacatctctgccaggttttcccttcccacctccatttttgggaatgccactg
tttcctccatttggtttgcctcctatgccgatgcctcctgctggctttgcgggtatgaca
gaagaggagttgagggcaatggaaggtcatgagaggcagaatctggaatccaggcttcag
tgtcttcagaacattcatactcttctagatgctgccatgttacagataaaccaatatctt
acggtgttggcaaccatcgggccccctcgtcctcccgtgccctctacaccgtctccatta
gtcaccacagatgcggttgtatcatccagtcagcctgaagaaactcccacttcggataca
ccctcagctgaccccgatccctcccagtcagttccagaggaatccaccagtgaagagatg
atcaatgactctgaagctggcacttcaacagaagaaccagatgctgtagagctacgaagg
cgaagacttcagaaactggaaaccggcacctccgaatctcaatga
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