KEGG   Bufo gargarizans (Asiatic toad): 122920754
Entry
122920754         CDS       T07965                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122920754 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bgar03021]
    122920754 (SF3B3)
   03041 Spliceosome [BR:bgar03041]
    122920754 (SF3B3)
   03036 Chromosome and associated proteins [BR:bgar03036]
    122920754 (SF3B3)
Transcription machinery [BR:bgar03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     122920754 (SF3B3)
Spliceosome [BR:bgar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122920754 (SF3B3)
 Complex B
    122920754 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    122920754 (SF3B3)
Chromosome and associated proteins [BR:bgar03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     122920754 (SF3B3)
    TFTC complex
     122920754 (SF3B3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A
Other DBs
NCBI-GeneID: 122920754
NCBI-ProteinID: XP_044126405
LinkDB
Position
10:complement(128586712..128599574)
AA seq 1217 aa
MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVATAMSVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGTTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGLVYTYKLVNNGEKLEFVHKTPVEEVPAAIAPFQGRIL
IGVGKLLRVYDLGKKKLLRKCENKHIANFIVGIQTIGQRIIVSDVQESFIWVRYKRNENQ
LVIFADDTYPRWVTHSSLLDYETVAGADKFGNICVIRLPQNINDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHMRSEHPPICGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPIKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctctacaacatcaccctgcagagggccactggcatcagctttgccatccatgga
aacttctcaggaacgaaactccaggagattgttgtttcccgagggaagatcttggagctg
ctgcgccctgatgccaacacgggtaaagtgcacacgctactgacggtggaggtgtttggc
attatccgctccctgatggctttccgtctgactggtggcaccaaggattacattgtggtg
ggcagcgactccggccgcatcatcatcctggagtaccacccatccaagaacatgtttgag
aagatccatcaggagacatttggaaagagtggctgccgcaggattgtgcccgggcagttc
ttggctgtagaccccaagggcagagctgtgatgataagtgccatagagaagcagaagctg
gtgtacatcctgaacagagatgctgctgcccggctcaccatctcctcaccactggaggct
cacaaggccaacaccctggtgtaccacgtggtgggggtggacgtaggctttgagaacccc
atgtttgcttgcctggagatggattatgaggaagctgataatgatcctaccggggaagcg
gctgctaacacccagcagacactgaccttctacgagctggacctcggtctgaaccacgtc
gttcgcaagtacagtgaacccttggaggagcacggcaacttcttaattacagttcccgga
ggctcggatggccccagcggggtgctgatttgttcagaaaactacattacatacaagaac
tttggcgatcagccggacatccgctgtcccatcccgaggcggaggaacgacctggacgac
ccagagcgagggatgatattcgtctgctcagctacacataaaaccaaatccatgtttttc
ttcctggcccagacggagcagggcgacatcttcaagatcacgctggagacggacgaggac
atggttactgaaatccgcctgaagtactttgatactgtcccagtggccacggcaatgagc
gtcttgaagactggcttcctctttgtggcttcagagtttgggaaccattacctgtatcag
attgctcatctgggtgatgatgatgaggagcctgagttctcctccgccatgcccctagag
gaaggagatacgttcttctttcagcctcgtcctctaaagaacctggtgctggtggatgag
caggacagtctgtcccccatcatgtcctgccagattgctgacttggccaatgaagacact
cctcagttgtacgtggcttctggccggggtccccgctcttctctcagggtcctgaggcac
gggctcgaggtctctgaaatggctgtctcagagctgcccggtaaccccaatgctgtgtgg
accgtgaggcgacacattgaagaggagtatgactcgtacatcatcgtgtccttcgtgaac
gccaccctggtactttctattggtgagactgtagaagaagtgacagattctgggtttctg
gggacaaccccaaccctgtcctgttctctgttgggagaagacgccttggtccaggtctat
cctgatggaatccggcacattcgagcagacaagagagtcaatgagtggaagacaccgggg
aagaagataatagtgaagtgtgctgtgaaccagcggcaggtggtgatcgctctgaccggg
ggtgagctggtctactttgagatggacccttcagggcagctaaacgagtacacggagagg
aaggaaatgtccgcagatgtcgtgtgcatgagcctggccaacgtgccgccaggggagcag
cgatcacgcttcctggcagttgggctggtggacaatactgtcagaatcatctctctggac
ccatctgactgtctgcagccactcagtatgcaggcgctccccgcacagccggaggccctg
tgtatcgtggagatgggaggtgcagagaggcaggatgagcttggggagagaggctccatt
ggttttctctatctcaacattggacttcagaatggtgtgctgctcagaactgtgctggat
cctgtaaccggtgacctgtctgacaccagaactcgctatctagggtccaggccagtcaag
ttgtttcgtgtgaggatgcagggtcaagaggcagtactggccatgtccagtcgttcctgg
ctcagctattcctaccagtctcgtttccacctgactcccctatcgtacgagactctggag
tatgcgtccggcttcgcttcagaacagtgtccagaaggcatagtggccatttccaccaat
accctgagaattttggctctggagaagttgggtgcggtgtttaaccaagtggctttccct
ctccagtacacaccacgaaagtttgtgatccatccggaaagtaataacttgattatcatt
gaaacagaccacaatgcttatacagaggccaccaaggctcagcgcaagcagcagatggca
gaggaaatggttgaagctgcaggagaagatgagcgagagctggctgcagaaatggcagct
gcattcctcaatgagaacctgccagagtccatttttggagccccaaaagctggaaatggg
cagtgggcgtccgtcatccgggtgatgaatccaatccaggggaccaccctggacctggta
cagttggagcagaatgaggcagcctttagtgtggcggtctgtcggttcagcaacactgga
gacgactggtacgtcttggttggcgttgccaaagacctgatcctgaacccccgctctgtg
gccggaggactggtctacacttacaagctggtgaacaatggagagaagctggagtttgtg
cacaagacccctgtggaggaagtccccgctgcaattgctcctttccaaggtcgaatcttg
ataggagtcggcaaactgctgagagtttacgatctggggaagaagaagcttctgaggaaa
tgtgaaaacaagcacattgcaaacttcattgtgggcatacagaccatcgggcagcgcatc
atcgtctccgatgtacaggaaagcttcatatgggtgcgctacaaacgcaacgagaaccag
ctggtcatattcgccgatgatacgtatcctcgctgggtcacacactcctccctgctggac
tacgagaccgtggccggcgctgacaagtttgggaacatctgtgtgatccggctgcctcag
aatataaatgatgatgttgatgaagatccaactggtaacaaggctttgtgggaccgaggg
ctgctgaacggagcctctcagaaggcagaggtgattgtgaactatcacgtaggagagacg
gtgctgtcgctgcagaagacgacgcttatccccgggggctccgagtctctggtctacact
actttatctggaggcattggcatccttgtcccatttacttcccatgaggatcatgatttc
ttccagcacgtagagatgcacatgcgctccgagcacccccccatctgtgggcgagaccac
ctcagcttccgctcctattacttccctgttaagaatgtgattgatggagacttgtgtgaa
caattcaactccatggagccaatcaagcagaagagcgtggctgaggagctggacaggacg
ccacccgaggtctcgaagaagctggaagacatccgtacacgatacgccttctag

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