Bufo gargarizans (Asiatic toad): 122920754
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Entry
122920754 CDS
T07965
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122920754 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122920754 (SF3B3)
03041 Spliceosome [BR:
bgar03041
]
122920754 (SF3B3)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122920754 (SF3B3)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122920754 (SF3B3)
Spliceosome [BR:
bgar03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122920754 (SF3B3)
Complex B
122920754 (SF3B3)
Complex C
U2 SnRNP specific factors
122920754 (SF3B3)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122920754 (SF3B3)
TFTC complex
122920754 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
122920754
NCBI-ProteinID:
XP_044126405
LinkDB
All DBs
Position
10:complement(128586712..128599574)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVATAMSVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGTTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGLVYTYKLVNNGEKLEFVHKTPVEEVPAAIAPFQGRIL
IGVGKLLRVYDLGKKKLLRKCENKHIANFIVGIQTIGQRIIVSDVQESFIWVRYKRNENQ
LVIFADDTYPRWVTHSSLLDYETVAGADKFGNICVIRLPQNINDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHMRSEHPPICGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPIKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcaccctgcagagggccactggcatcagctttgccatccatgga
aacttctcaggaacgaaactccaggagattgttgtttcccgagggaagatcttggagctg
ctgcgccctgatgccaacacgggtaaagtgcacacgctactgacggtggaggtgtttggc
attatccgctccctgatggctttccgtctgactggtggcaccaaggattacattgtggtg
ggcagcgactccggccgcatcatcatcctggagtaccacccatccaagaacatgtttgag
aagatccatcaggagacatttggaaagagtggctgccgcaggattgtgcccgggcagttc
ttggctgtagaccccaagggcagagctgtgatgataagtgccatagagaagcagaagctg
gtgtacatcctgaacagagatgctgctgcccggctcaccatctcctcaccactggaggct
cacaaggccaacaccctggtgtaccacgtggtgggggtggacgtaggctttgagaacccc
atgtttgcttgcctggagatggattatgaggaagctgataatgatcctaccggggaagcg
gctgctaacacccagcagacactgaccttctacgagctggacctcggtctgaaccacgtc
gttcgcaagtacagtgaacccttggaggagcacggcaacttcttaattacagttcccgga
ggctcggatggccccagcggggtgctgatttgttcagaaaactacattacatacaagaac
tttggcgatcagccggacatccgctgtcccatcccgaggcggaggaacgacctggacgac
ccagagcgagggatgatattcgtctgctcagctacacataaaaccaaatccatgtttttc
ttcctggcccagacggagcagggcgacatcttcaagatcacgctggagacggacgaggac
atggttactgaaatccgcctgaagtactttgatactgtcccagtggccacggcaatgagc
gtcttgaagactggcttcctctttgtggcttcagagtttgggaaccattacctgtatcag
attgctcatctgggtgatgatgatgaggagcctgagttctcctccgccatgcccctagag
gaaggagatacgttcttctttcagcctcgtcctctaaagaacctggtgctggtggatgag
caggacagtctgtcccccatcatgtcctgccagattgctgacttggccaatgaagacact
cctcagttgtacgtggcttctggccggggtccccgctcttctctcagggtcctgaggcac
gggctcgaggtctctgaaatggctgtctcagagctgcccggtaaccccaatgctgtgtgg
accgtgaggcgacacattgaagaggagtatgactcgtacatcatcgtgtccttcgtgaac
gccaccctggtactttctattggtgagactgtagaagaagtgacagattctgggtttctg
gggacaaccccaaccctgtcctgttctctgttgggagaagacgccttggtccaggtctat
cctgatggaatccggcacattcgagcagacaagagagtcaatgagtggaagacaccgggg
aagaagataatagtgaagtgtgctgtgaaccagcggcaggtggtgatcgctctgaccggg
ggtgagctggtctactttgagatggacccttcagggcagctaaacgagtacacggagagg
aaggaaatgtccgcagatgtcgtgtgcatgagcctggccaacgtgccgccaggggagcag
cgatcacgcttcctggcagttgggctggtggacaatactgtcagaatcatctctctggac
ccatctgactgtctgcagccactcagtatgcaggcgctccccgcacagccggaggccctg
tgtatcgtggagatgggaggtgcagagaggcaggatgagcttggggagagaggctccatt
ggttttctctatctcaacattggacttcagaatggtgtgctgctcagaactgtgctggat
cctgtaaccggtgacctgtctgacaccagaactcgctatctagggtccaggccagtcaag
ttgtttcgtgtgaggatgcagggtcaagaggcagtactggccatgtccagtcgttcctgg
ctcagctattcctaccagtctcgtttccacctgactcccctatcgtacgagactctggag
tatgcgtccggcttcgcttcagaacagtgtccagaaggcatagtggccatttccaccaat
accctgagaattttggctctggagaagttgggtgcggtgtttaaccaagtggctttccct
ctccagtacacaccacgaaagtttgtgatccatccggaaagtaataacttgattatcatt
gaaacagaccacaatgcttatacagaggccaccaaggctcagcgcaagcagcagatggca
gaggaaatggttgaagctgcaggagaagatgagcgagagctggctgcagaaatggcagct
gcattcctcaatgagaacctgccagagtccatttttggagccccaaaagctggaaatggg
cagtgggcgtccgtcatccgggtgatgaatccaatccaggggaccaccctggacctggta
cagttggagcagaatgaggcagcctttagtgtggcggtctgtcggttcagcaacactgga
gacgactggtacgtcttggttggcgttgccaaagacctgatcctgaacccccgctctgtg
gccggaggactggtctacacttacaagctggtgaacaatggagagaagctggagtttgtg
cacaagacccctgtggaggaagtccccgctgcaattgctcctttccaaggtcgaatcttg
ataggagtcggcaaactgctgagagtttacgatctggggaagaagaagcttctgaggaaa
tgtgaaaacaagcacattgcaaacttcattgtgggcatacagaccatcgggcagcgcatc
atcgtctccgatgtacaggaaagcttcatatgggtgcgctacaaacgcaacgagaaccag
ctggtcatattcgccgatgatacgtatcctcgctgggtcacacactcctccctgctggac
tacgagaccgtggccggcgctgacaagtttgggaacatctgtgtgatccggctgcctcag
aatataaatgatgatgttgatgaagatccaactggtaacaaggctttgtgggaccgaggg
ctgctgaacggagcctctcagaaggcagaggtgattgtgaactatcacgtaggagagacg
gtgctgtcgctgcagaagacgacgcttatccccgggggctccgagtctctggtctacact
actttatctggaggcattggcatccttgtcccatttacttcccatgaggatcatgatttc
ttccagcacgtagagatgcacatgcgctccgagcacccccccatctgtgggcgagaccac
ctcagcttccgctcctattacttccctgttaagaatgtgattgatggagacttgtgtgaa
caattcaactccatggagccaatcaagcagaagagcgtggctgaggagctggacaggacg
ccacccgaggtctcgaagaagctggaagacatccgtacacgatacgccttctag
DBGET
integrated database retrieval system