Bufo gargarizans (Asiatic toad): 122921091
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Entry
122921091 CDS
T07965
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgar03000
]
122921091 (SOX6)
Transcription factors [BR:
bgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122921091 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF2647
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122921091
NCBI-ProteinID:
XP_044126942
EnsemblRapid:
ENSBGGG00000022891
LinkDB
All DBs
Position
10:12403059..12691297
Genome browser
AA seq
811 aa
AA seq
DB search
MPSSSEVLTSVIAERSSDQWKDSHFIRMSSKPATSPFTCKADGEEELSGGDLSSREKEDL
DEQSLGGLLPLHTLLHTKPHPEELTSLVNNMQADADWENMMSTQHRMDLDSNKLRSLYSF
RTTSTSPHKPDEGARDRSDLMSSVNFGTPERRKGSLADVVDTLKQKKLEEMTKSEQEDST
CMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMISQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINVLQQQIQQVQGHMPPLMIP
IFSHDQRTLAAAAAAQQGFLFPPGLTYKPGDNYPVQFIPSSMAAAAASGLSPLQLQQIYA
AQLASMQVSPGAKMPSTPQPPNSTGALSPTGMKSEKRGTSPVTQIKDEAAQPLNLSARPK
TAEPVKSPTSPTQNFFSPSKTSPVSLSNKSGIPSPISGALGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQHQPHGLDNKLPLSNIGLNNCRSDKMLLDAISGRICIR
SAHTERTHYDNIGAQLSGKPGEDGKLGPGVIDLTRPEDAEGGTTVVEARVYRDARGRSSN
EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL
SKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPIST
ATGVVYPGAISMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKLDAASLGGNDLMNG
EDEMEMYDEYDEEPKSDYSSDNEANEAVSTN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccatccagctctgaagttctgaccagcgtcatagcagaacgcagctctgatcagtgg
aaggacagtcacttcataaggatgtcgtccaaacccgccacctctccattcacctgtaag
gctgatggagaggaggagttatccggaggagacctgtcttcacgggaaaaagaggacctg
gatgagcagtccctgggcggcctcctgcccctgcacaccctcctacacaccaaacctcac
cccgaggaactgacgtcacttgtcaacaacatgcaagccgacgctgactgggaaaacatg
atgtccacccagcatagaatggacctggacagcaataaattacgttccctctattccttc
cgaactacgtctacctcaccacacaagcctgacgaaggcgctcgcgaccgcagcgatctt
atgagcagtgttaactttgggactccagaacgacgcaaaggaagcctggccgatgtggtg
gacacgctgaaacaaaagaaactggaagagatgacgaagtcggagcaggaggactctact
tgtatggagaagcttctttctaaagactggaaggagaagatggagcggctaaacacaagt
gaacttctcggggagattaaaggaacgccggaaagcctagcagaaaaagagcgacaactc
tctaccatgatatcgcagctgatcagccttcgagagcagctcctggccgcacatgatgag
cagaagaagctggcagcttcccagatagaaaaacagcgacagcaaatggacctggcaaga
cagcagcaagaacagatcgcacggcagcaacagcaactactgcaacagcaacacaagatc
aatgtccttcagcagcagatccagcaggtccagggtcacatgcctcctctcatgatccct
atcttctcacacgaccagcggacgttggcagcggcggctgcagcccagcagggattcctc
ttccccccaggactaacctacaaaccaggtgataactaccccgtgcagttcattccatca
tcgatggctgctgccgccgcctctggactcagcccgttacagctccagcagatctacgca
gcacagctcgccagcatgcaggtgtctccaggagccaagatgccgtccacaccgcagcca
ccaaactctaccggagccctgtcccccaccggaatgaagagtgaaaagagagggaccagc
cctgtgacacagatcaaggatgaagccgcacagcctctgaatttatcagcgcgaccgaag
acagcagagcccgtaaagtctcccacatcgccgacgcagaacttcttctcgcccagtaag
accagtcctgtgagtctatccaacaagagcggcatccccagtccgatcagcggagccttg
ggcagaggatcctccttggatatcctctccagtctgaactctcccgccctcttcggagac
caggacacggtcatgaaagccatacaagaagcccgcaagatgagggagcagatccagaga
gagcagcagcaccagccccacggcctggacaacaagctgccactcagtaacatcggcctg
aacaactgcaggagcgataagatgctgctagatgccatctcaggaaggatttgcattagg
agtgcacacacagagaggacacattacgacaatatcggtgcccagttatcagggaaaccc
ggcgaagacggaaagttggggcctggggtcatcgatctgacaaggccagaggatgcagag
gggggcaccacagtggtggaggcgcgagtctacagggacgcacgaggacgcagcagcaat
gagccgcacatcaaacgaccaatgaatgctttcatggtttgggcaaaagacgaaagaagg
aaaatcctgcaggcgtttcctgacatgcacaactccaacatcagcaaaatccttggttcc
cgctggaaatccatgtccaatcaagaaaaacaaccttattatgaagaacaagcacggctg
agcaagatccacctggagaagtatcccaactacaagtacaagccgcggccgaagcgcacc
tgcattgtggacggcaagaaactgcgcatcggcgagtacaagcagctgatgagatccagg
cggcaggagatgaggcagttctttactgtggggcagcaacctcagatcccaatcagcaca
gcgaccggggttgtatatccgggtgcaatcagcatggccacgaccacgccgtcaccgcag
atgacatcagattgctccagcacttccgccagccctgagcccagcatccccgtcatacaa
agcacctatggcatgaaactggacgctgccagtctgggcgggaacgatctgatgaacggg
gaggatgaaatggaaatgtacgacgaatatgacgaggagcctaaatcagactatagcagt
gacaatgaggccaatgaagccgtgagtaccaactga
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