Bufo gargarizans (Asiatic toad): 122921927
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Entry
122921927 CDS
T07965
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122921927 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bgar04091
]
122921927 (FREM1)
Lectins [BR:
bgar04091
]
C-Type lectins
Lecticans
122921927 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
122921927
NCBI-ProteinID:
XP_044128198
LinkDB
All DBs
Position
1:441296484..441494381
Genome browser
AA seq
2171 aa
AA seq
DB search
MNLFWGCRIYPSLAFIVVTLRIVSSSFIKVNNGITVMKGQVGYLSENDLQFFIPKEKDAC
KLEIVVNEPITQRVGKLSPQVFDCHFLNNEVQYIHYGCPILDEDEVMLRLYRFTETQTFT
ENFILRVKLVEPDCNIIKLGPKKLEVTEFYGLSNIIDKNTLNFDYEKRLNLECTVRVSSL
ESYLPAHGQLVTGDPVKDQPRGDHPHSYLSRTNHKLSPLCKSGGCIQGLKKLQNTIKTSC
EEFLLMGVRYQHLDPPSPNIDYISIRLDLIDTRSKALYKSEHAWIPIHIRDALPNQIPKA
AFMSMFILEVDQFILTPFTTAALDAEDSETSKPLLVFNITVPPHKGFITHLSDHTKPITS
FTWKDLNDMLIAYQPPNSSHVERRNIEVELEVHDFFFERSSPITVYISVRTADTNAPRVS
WNMGLDLLEGQSRAMTWEQFQVVDNDNINAVRLVILDGLHHGRITLRGGKGFMFTVKDIQ
DGVVCYHHDDSDTTKDFVVFRIFDGRHSIRHKFPINILPKDDSPPFLITNTVIELLEGQT
VLIQGSMLCASDMDSSDDYIRFNITKQSVAGSIMKKPGQNALAYPVTTFLQRDLFNGIIY
YQHLGGEIFEDSFEFILCDSHTPPNLSGPQAVIIHITPVDDQLPKEVPGTIRHLIVNETD
VVHITKKQLHFIDTESPERELIYTVTKPPCRSSSFSSDLDAGKIFLADSIQKFVKDHSAT
TTATFSQHAVSHMKVAYMPPMEDIGPDILHVSLTLSVSNQHGGTLFGICFNITILPVDNQ
PPQVLTYDLRVEEGSSHPLTVEHVHISDKDTNQDKLRITLQAAPLHGTIQLDGRPINEGE
QFHYLDFSMLKVRYQHDGSETLEDEIKCIATDGINSAEFLLKIQVLPVNDEPPVMKDNLL
PTIYCSEGDGVVLSSDYIYAVDADSDDTKLMFMIARQPRWGIIQKNGVTIDRFSQRDVLK
GVVIYQHTSGEIGLQPCYDIITLVISDAELDADVNNCCSNGPLNPLVPNHDSFPVYDLNI
TVYPVDNQSPSITIDDIFTVDEGKSCTITLSHLHASDPDTDNNYLKFVLVSPPRYGYIEN
ILPSPGFEKSNMGISIDSFTLKDIISQNINYVQSRHHRIEPTADQFTLYVTDGKHHSLEK
PFYIIINPTNDEVPEFMARNITVEEGQMRELDPSVINVSDMDVPQNYLSFTVTVHPHHGL
LIEEGFGVDQIRQLLSKSRKNSTTPIVYDFEMEQLRNGMKLAYVHDDSENLADSFTIRLS
DGQHEVERTIYVTIIGVNDEKPVLTKHCEVVLSLGENYIISSAVLSAEDKDTPREEIYYI
IDQTPGQGELQMKVHEKWINLNTGMKCSQDDIDMNLIRYVHRGTLGSKNEDSFTFHLWDG
RNRSPELQFHILVKDMEKGDIAVFVKTLHVSRGDRVILSTNVLLATDGTDKPEELLYVVV
SPPQYGQIEYANHHGIPITSFSQMDVAAQTVCYVHNGKAAAAADTFKFLVSNGLRTKHGT
LDIAVEMVDKTLPTLSKNYGLRQVKGSMALITTEILQATDPDTSLENITFLMINRPQYGQ
IYLRGAPMKENNFTQKDIENMNVAYRHGGQDAQIDKFTFLVMDKTNKGFIMDGKVQMNPV
PFIIQVDFPDDTSPRIVHLYCAAQIQLLDDGRYGIYITSREIKAIDPGTEEEKIIFKILR
APQRGYLENVVSGDFISDQFTQKDLSSKSLLYVVNPSVDVYEDSVEFEVTDPSGNRAAPQ
ILEIKWSRVELLQDMYEVCEKEALVSLKITRWGYSVDSAFISLQVNGVSAVDGKDFSSSS
SRLIQFDPGVSTRTWNIAITQDGLEEDDETFEVILNSPVNAVLGTNTRAVVKIVDPRGGI
CHLGKVKSTVTNCTNKPVHLQCSHSLGESPRPNLKGEEGVIRGDVLEEFSPTQNGKKRLR
VVGNEKSVKPSSVHHNGTDTIYTYHGIVSLRLEEERINSSKVARLSVTNHGKPRMEAASR
RAEHLQSDRALVTTDSSAAKKKTSQFPKECTPGLRGLLHFDQKSQKLFQCDGSSWNTWVA
TAKATKCPFGWTPHDSSCYKHITEQKATWITAARICREEYHARLVDIFTKEQMDWLWNFS
GRKSFWIGLNDRVKHGKWEWSNGEKAAYTNWKRSPPPRSKKGRNCVSVQKKGKWQVKSCR
KTYYYVCSKNM
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttttggggatgtcgcatatatccatcacttgcttttatagtagtgactttg
aggattgtaagctcttcctttatcaaagtcaataatgggatcacagtgatgaaaggacag
gttggctacctatcagaaaatgacctacagttcttcatccccaaggagaaagatgcctgc
aaactggaaattgttgttaatgaaccgattacccagagagttggaaagttatctccgcag
gtatttgattgtcattttttgaataatgaagtccagtacattcactatggctgccctata
ttggatgaagatgaagtcatgcttcgactttacaggtttacagaaactcaaacattcaca
gagaacttcatattgagggtgaaattagtggaaccagactgtaatattataaagctggga
cctaagaaactggaagtcacagaattctatggactatcgaatatcattgacaagaacaca
ctgaattttgactatgaaaaaagattgaatctggaatgtactgtccgggtgtcttcttta
gaatcatatctgccagctcatggtcaacttgtcactggagatcccgtgaaagaccagccc
cgcggggatcatccacacagctacttaagtagaaccaaccataagctaagtcctctgtgc
aaaagtggaggctgtattcaagggctaaaaaagttacagaacacaataaaaaccagctgt
gaggaatttcttcttatgggggtgcgataccaacatttagaccccccatccccaaatatt
gactacatcagtatcagattggaccttattgacacccgaagcaaagctttgtacaagtct
gaacatgcatggattcccattcacattcgagatgctttacccaatcagatccccaaagca
gccttcatgtcaatgtttattttagaagtggaccagttcatcctcactcccttcaccact
gcagcacttgatgcagaggacagcgaaacaagcaaacccctgctagtcttcaacatcaca
gtccctcctcataaaggattcattactcatcttagtgatcataccaagcctattacatcc
ttcacatggaaagatctcaatgacatgctcattgcatatcaaccaccaaacagcagtcat
gttgaaagaagaaacatagaggttgaattagaagttcatgatttcttttttgaaaggagc
tcaccaatcacggtttacatatctgttagaacagctgacacaaatgcccctcgggtatcc
tggaatatggggctggatctcttggaaggtcagtctcgagcaatgacatgggaacaattt
caagtagtagataatgacaacattaatgcagttcgcctagtgattttggatggcttgcac
catggaaggataactctaagaggaggaaaaggattcatgttcaccgttaaagacatacag
gatggagttgtctgctatcaccatgatgacagtgacactaccaaggattttgttgtgttc
aggatatttgatggacgtcacagcattcgccacaagttcccaattaatatccttcctaaa
gatgacagcccaccttttctcatcactaacacagtcattgaactcttggaaggacagact
gttctcattcaaggctcaatgctatgtgcctctgacatggactccagcgatgattatatt
cgcttcaatatcactaagcagtcagtggctggaagcatcatgaagaaaccgggacagaat
gccttagcttatcctgttaccactttcctacaaagagacttattcaatggcatcatttac
tatcagcatcttggaggagaaatttttgaagattcatttgaatttatcctatgtgatagt
catacccctcctaacctgtctggtcctcaggctgtgattatacatataacaccagtggat
gatcagctaccaaaagaggtccctggaacaattcgtcacctgattgttaacgaaactgat
gttgtccatataacaaagaaacaactacattttatcgacacagaatctccagaaagagaa
cttatttacactgtaactaagcctccatgccgatcatcatccttctccagtgacctagat
gctggaaagatttttcttgcagacagtatacagaaatttgtaaaggatcattctgctacc
acaacagcaactttcagtcaacatgcagtgagccacatgaaggttgcatatatgcctccc
atggaagatatcggtcctgatattctacatgtcagccttaccttatcagtcagtaatcag
catggaggtaccttgtttggtatctgcttcaatatcacaatacttccggtagacaaccaa
ccgccacaggtattgacatatgatctgagagtggaggaaggcagctcccatcccttaact
gtggaacatgttcatatcagtgataaggacacaaatcaagacaagcttcgtatcactttg
caagcagcaccgttacatggaacaattcaactagatggcagaccaattaatgaaggagaa
caattccactacctggacttcagcatgttaaaagttaggtaccagcatgatggttcagag
accctagaagatgaaattaaatgtattgctacagatggtatcaactctgctgagtttctt
ctaaaaatacaggttttaccagtaaatgatgagccaccagttatgaaggacaacctctta
ccaacaatatactgttcagagggagatggagtggtcctttcaagcgactatatctatgct
gttgatgcagatagcgatgatacgaaactgatgtttatgattgcacgccagcctcgctgg
ggcattatccagaagaatggagtcaccattgaccggttctctcaaagagatgttcttaaa
ggagttgtgatctaccagcataccagtggagaaattggattgcaaccttgctatgacatt
ataacccttgttatctcggatgctgaattggatgctgatgtgaacaactgctgctctaat
ggacctcttaacccgctagtgcccaatcatgactcttttccagtgtatgacctaaatatc
acagtttatcctgtggataaccaatcaccatcaatcacaatagatgacatatttactgtg
gatgaaggcaaatcatgtacaattactctaagtcacttacatgccagtgaccctgacacg
gacaacaattatttgaaatttgtactggtttctcctcctcgatatggctacattgaaaat
attctcccatctccaggttttgagaaaagtaacatgggaataagtattgattcatttaca
ttgaaggacatcatatcacaaaatataaactatgtccagtcgagacatcaccggattgaa
ccaactgcagatcagtttactttatatgtcactgatgggaaacatcactctctggagaag
ccattttacatcataatcaacccaacaaatgatgaagttccagaatttatggccagaaat
atcacagtggaggaaggccaaatgagagaacttgatccttcagtaattaatgtgtcagac
atggatgtcccccagaattacttatcatttactgttaccgtacatcctcatcatgggttg
cttattgaagaaggttttggagtagaccaaattagacaactactttctaaaagccgcaaa
aatagcaccactcctattgtttatgacttcgaaatggaacaactcagaaatggtatgaag
ctagcatatgtgcatgatgactctgaaaacctggctgacagcttcacaatccgattgtcg
gatggacaacatgaagtggagagaaccatctatgttaccattattggggttaatgatgaa
aaaccagtccttacaaagcactgtgaagtagtgctgagcctgggtgaaaattacattatt
tcaagtgctgtactgtcagctgaagataaggacactcccagagaagaaatttactacata
attgaccaaactccaggccaaggagaacttcaaatgaaggtacatgaaaagtggataaac
ttaaatactggaatgaaatgtagtcaagacgacattgatatgaatctgatcagatatgtc
cacagaggaacacttggttcaaaaaatgaagacagctttactttccacctgtgggatggc
aggaacaggtctcctgagctacaatttcacatcctagttaaagatatggagaagggagac
attgcagtatttgtgaaaacacttcatgtgtcaagaggagacagggtcatcttaagcact
aatgttctcctggccactgatggcacagacaagccagaggagctgctatatgtagttgtc
tccccaccgcaatacgggcagattgaatatgccaaccaccatggaattcccataacaagc
ttcagtcagatggatgtggccgctcagactgtctgctatgtccacaatggcaaagctgca
gctgctgctgatacgttcaaattccttgtcagcaatgggctgcgaacaaaacatggcact
ctggatatagcagtggagatggtagacaaaactcttccaacgctgagcaagaattatggt
cttagacaggtgaaaggatctatggcattgatcaccacagaaattcttcaggcaactgac
ccagatacatcactggagaatattacatttttgatgatcaaccgcccccagtatgggcaa
atatatttaagaggggcaccaatgaaggagaacaacttcacccagaaagatattgaaaat
atgaatgttgcctacagacatggagggcaggatgctcagattgacaagttcacatttctg
gttatggataaaacaaataaaggatttataatggatggaaaggtgcagatgaatccagtg
ccgttcattatacaggttgattttccagatgataccagtcctagaattgtccacctttac
tgtgcagcacaaattcaacttctcgatgatggtcgctatggaatctacataacatctaga
gaaataaaggctattgatccagggacagaggaggaaaaaattatctttaaaatattaaga
gctcctcaaaggggatacctggagaatgttgtatcaggcgattttatttcagaccaattc
acgcagaaggacttgagcagcaaatctttattgtacgtagtgaacccatcagttgacgtc
tatgaggattcagtggaatttgaagttacagatccatctggcaacagagctgcacctcaa
atcttggaaataaaatggtctcgtgttgagttgctccaggacatgtatgaggtgtgtgag
aaggaggcactggtgtctttgaagataacacgctggggttactctgtagactctgctttt
atttcactacaggtaaatggagtaagtgctgtggatggaaaagatttttcttcaagctct
tcaagactaatccagtttgacccaggagtgtcaaccaggacgtggaatatagcaattacc
caagatggattagaagaggacgatgagacctttgaagtgattctaaattctcccgtgaat
gccgttcttggcactaatacaagagctgtagtgaaaattgtggaccccagaggaggaatt
tgccatttagggaaggtaaaaagtactgtgacaaactgtaccaataagccagtacatcta
caatgtagccatagcctgggagaatctccacgtcctaacctaaaaggggaagaaggagtc
atcagaggagatgtgctagaagaatttagccctacacagaatggaaagaaaagactcagg
gttgtcggaaatgaaaaatcagtaaaaccatcctctgtgcaccataatggaactgacacc
atttatacatatcatggcatagtgtcacttagactggaagaagagagaatcaactccagc
aaggtagccaggttatcagtgacaaaccatggtaagccaaggatggaagctgcatcccga
agggcagagcatctacagtcagacagagctctggtgacaactgattcttctgctgcaaaa
aagaagacatcgcaatttccaaaggaatgtactccagggttgagaggacttctgcatttt
gatcaaaagagccaaaagcttttccagtgtgatggttcatcatggaatacctgggtagct
acagccaaggcaacaaaatgtccatttggctggactccacatgacagcagctgctacaaa
catatcactgagcagaaggccacatggatcaccgccgcccggatatgtcgggaagaatac
catgctagacttgtagacatattcactaaagagcaaatggattggctgtggaacttcagt
gggaggaaatctttttggatcggcctcaatgatcgagtaaagcatggcaaatgggaatgg
agcaatggagagaaggctgcatacactaactggaaaagaagtccacctcctcggtcaaaa
aaagggagaaattgtgtttctgtacaaaaaaaagggaaatggcaggtcaagagctgccgg
aaaacatattattatgtatgctcaaaaaatatgtaa
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