Bufo gargarizans (Asiatic toad): 122923117
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Entry
122923117 CDS
T07965
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgar04131
]
122923117 (VPS13A)
Membrane trafficking [BR:
bgar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122923117 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
122923117
NCBI-ProteinID:
XP_044129780
LinkDB
All DBs
Position
1:complement(489163105..489389232)
Genome browser
AA seq
3199 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGKLDLKIPWKNLYTQPVEAVLDGVYLLIVPIASIKYDAEKEEKQFLEARQRELLRIEE
AKQKVADQERPKEEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDDVTNSECPLSFGVSLQ
NLSLQTSDKNWNPCLHDESSKLFYKIVRLDNLFAYWNVKSEMYYHRSYNEALGILKYGVA
SQNVIPEGYDFVFRPISGRAKLRMNPRSDFDFSSPKIDLDVNLQDIAIEFKKPQYHSVME
LLESIDMMSRNLPYRKFRPNVGVHDNAKKWWNYAITGILEVNVKPRVQMWSWKHIRKHRQ
QTKRYKDLYRTKITSKKPSEDIIRMTEECEGTLDIFCITLARQQAEVEANKAGLKIFRPG
IKDEDSNSKGWFGWMWGWSGEDQEKKEVAKSGSIGELMTTEEKSKLYAAIGYSETAVDPT
LPKTYESMIVSVKLLSMSIQLQEDRGKSELINFTITDLSTVLKQRPGAQAIRFEAQIGTF
EITGIPLDNVIPCLLSSRNVVVDNNISLLSLMFETNPLDESADQRLIVDSQPLEIIYDAK
TINSLVDFFRPPKEVHLEQLTSATLNKLEEFRDKTSTGLLYVIETQKVLDLKIDLMASYI
IVPQNGFYDLNSNLLILDLGSLKMTSKSRCNLPQLKIGQNSLEDIMSRAYESFDVQLSSM
QLLYSRHYENWKEARSQKHSALHILEPMDLRVDFSRAMVVTDARMPKIKLFGELPILSVK
ISDQKLKGVLELIDSIPKPESSTAPSASPKKAPSQKSPPMTTPLLVAKHPDLVALQSIIE
SDLESESDEFYDAPTSPVEDMPFFDVSNGSLTKVNITRRKKLAKQETLKNLTEFQMRFEI
PVVVLQLCSLSEDTETTVLQMEILGLGTELNVRTFDMSANAFLREISLKCPQYTDDEEKP
VYLITTLDNTTDDLLIMEYIKADVNGPEFKTTYKNIEQLIQVNFSSLDVHLHTEALLNTM
SFVTNLMPQSEKKEPEQPVQEVVEEEDEEEKREGPRKKLTLKKSKYDDVISLHVRAQLAC
LRVFIQERECRISEISIEGLDSEVVMKKTSMDVLAKLKNIVILDSDCDARYKKAVYITGK
EVFSFKMVSYVGATEGASYSDMNIVDSAITLTVGCIQVIFVNKFVSALLAFINNFQAAKE
ALTEATVHAAEIAASGVKEMAQHSFRLALDINIKAPVVIVPQSSTSTNVLVADLGLINIK
NHFSIVAPKIRSNLPPVIDCMMVKLSDLKLYRTLFENGSLVSELELLQPLNLDITIERNL
AAAWYSDIPDIKIIGNLKPMNLILGQEDLTIILRTLNENLGDTSDKSDPEKNKTENSSSG
GNSPSHVASGTTVVTAAVVETYTPMKVKTTLKLDFQFDSLTLNLYSSSPSSPLTNTSERD
NSLKLAEFKLGLISTAVKMSSDGSMSAAVKLTNCMLDDKRQAIQKATPRMMEMKRGTEKN
VMVDVCYKQGREGTLIDVTVRDIYMCTSVEFLCTVADIFIKANEQSSAALRSSKQTSTPS
KEAALKPQVSRMEMNVVVKNPEFVFVADLSRADAPALVLTTQCELSIKNGPEQQHMTAAV
KNLHVKACPFLPDKRDGKITTILQPCDVFFQSVQSNGGPQNIELSIKSLMLKVSPVIINT
VITITSALSTSRKESISEATSPVPADLWKKKDLKDLKFWFLEEENEKENKNSGIDQIVLT
GEKLDLSIDSIIITLEAGVGHRTLPILLAKSSFKGNVKNWTTLINLYCQLELEVHYYNEI
FGVWEPLLEPLEVERSDNFRPWSLEVKMKKKLRKQICEIDGEEENYKIPDYVTAINIFSK
DQLNITLSKCGILTLTNLGQAFAEAASKTSDIFKKDQAPFVITNLLGLHISVFFPSDSFT
ALNVDPSLKSIELDDGENLSMDYVRTKAQTDQFSAMTSLSSKHFYMQLTPWNHSSSDKIP
LTKVGRSLYCVRHSDSGVERYIVCQIDSVDGTKCITIRSPLQIRNHFMVAFEVYHEDTCL
GTAEPESDFNIPLSTYRSTLCFKPALEEYEKCEGIDFEEFLKNQGSLLGRKCQSRKNNAD
SFIVNIVPVIDTLISSACTDERWDLPYVVHLWPSVVLHNLLPYQVAYSREGADNDRVEIE
DGCSVQIHNAVVDETKLRLRLSNYLDLNWEVKYHIQSKQPDIHFITFLCISELEKAELDI
AVHVTYTTGQTILAIHSPYWMVNKTGRMLQYKADDVHRKHPADHKKPLLFSFKPKNFFQN
NKVQLMITDSELSDPFSLDTVGSHGSVKCKSKQLEYQVGVSIHASSFNLTRIVTFTPFFM
IANRSIYKVFIIEEGSERVVVVCSGQCVPFWPENSSHKLSVQVEGCQIPPKNINFNKQDS
CTLLHLGDKLGGILLDVTPKDYSTVITFSDYLAGSAPFLLINDTKSENIEFCQSSVNGEN
DALPPGKAALFAWEDPTSERALYWKCGTSAGTVTQIEDRVEYLRMESSIVYLVSFLEGLQ
RIVLFTEDEKVFQVTYDSEKAELADQEVTVSLSNIGISLVNNYSKQEVSYIGITSSDVVW
ETKKKTRWRPLSVKQTDTLEAAYKDYSESSPTDNRIVELEANSQVCLTPTLTGMKFLQPP
LGPVRRSFLPALKVEYSASAHQASIRLQVYRIQIQNQIPGAIFPFVFYPVKPPKSVTMDS
EPKPFTDVSIVMRTAGHSEISRIKYFKVLIQEMDLRVDLGFLYALADLFTQSGKMPKDQV
EELFKKDIESIQAELSTVSSISTSRLSLYEDFHISPIKLHLSFSLSTGGDDGNKELRDKE
LIPVQSLNLLLKSIGATLTDVQDVVFKLAFFEIRNQVYSTQELQWEVIRHYSRQAIKQMY
VLVLGLDVLGNPFGLFRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGL
AGAASRITSAMAKGVAAITMDEEYQQKRREAMNKQPSGIREGLARGGKGLVSGFVSGITG
IVTKPIKGAQKEGAAGFFKGIGKGLVGAVTRPTGGIIDMASSTFQGIKRATDSSDEVESL
RPPRFIHEDGVIRPYRLREGTGSQMLQKIENGRFAKCKYFAHAMVNNTDLLMVMKSGVLF
VTKGTFGQLTCEWQYSFDEFTKEPIIVNGRRLRIEAKERVKSVFHAKEFGKIINFKTPDD
AKWILSKLEEVRDLHRKDT
NT seq
9600 nt
NT seq
+upstream
nt +downstream
nt
atggtctttgagtccgtggtggtggatgtgttgaaccgtttcctgggggactatgtggtg
aatctggacagctcgcagctcaagttggggatatggggcggtgccgtagcattgaagaat
ctggaaataaaagaaaatgcactgagtcaactggatgtgccttttaaagtgaaagcaggt
cacattggcaagcttgatcttaagattccttggaaaaatctatatacccaaccagtggag
gccgttttggatggagtatacttacttattgtgcctattgctagtataaaatatgatgca
gagaaagaagaaaaacagtttttggaagccagacagcgggaactactgcggattgaagag
gctaaacagaaagtggctgatcaggaaaggccaaaagaagaaaagcaggatacctttgtg
gagaagttagtaactcaggttattaaaaatcttcaagtgaagatctccaacattcatatc
cgatatgaagatgatgtcactaattctgagtgtccactttcctttggagtctcccttcag
aacctcagtttacagacatctgataaaaattggaatccatgtttacatgatgaatcttcc
aagttgttttacaagattgtacgtcttgacaacctgtttgcctactggaatgtgaaatct
gagatgtactaccaccgatcgtacaatgaagctttgggtattttgaagtatggtgtggct
tctcagaatgtcatccctgaaggttatgattttgtgttccgtccgatctcaggaagagca
aagctccgtatgaatccacgttccgatttcgacttttcttcaccaaaaatagatctggat
gttaaccttcaggacatagccattgaatttaaaaaaccacagtaccacagtgtcatggaa
cttcttgagtctatagacatgatgtcaaggaatctcccatatagaaaattccgaccaaat
gttggtgttcacgataatgctaaaaaatggtggaattatgctataactggcattcttgaa
gtcaatgtaaaaccacgcgttcagatgtggtcatggaaacatatccgaaaacaccgtcaa
cagacgaaaagatataaagacttgtacagaaccaagataacatcaaagaaaccatctgag
gacattattcgcatgacagaggagtgtgaagggactctggatatcttttgcattactcta
gcacggcaacaggcagaggtggaggcaaacaaagctggacttaaaatattcagaccaggc
ataaaagatgaggacagtaattcaaagggatggtttggttggatgtggggctggtctgga
gaagaccaagaaaaaaaagaagtggcaaaatctggaagtattggagaactgatgactact
gaagagaaatctaagttgtatgcagcaattggatatagtgaaacagcagtggacccaaca
ttgccaaaaacatatgaatctatgattgtaagcgtcaaactgctgagcatgtccattcag
ttacaagaagaccgaggaaaatctgagctgattaattttaccataactgatttgagcaca
gtattaaagcagcgtcctggtgcacaggcaattagatttgaagctcagataggcacattt
gaaataacaggcataccgcttgacaacgtcataccctgcctgctctcttcacgaaatgtt
gtggtggataataacatttcactgttgagtcttatgtttgaaaccaatccgctagatgaa
agtgctgaccaaagactgatagtggattctcagcctctggaaataatatacgatgctaaa
actatcaacagtctagtggattttttccgtccacccaaagaggttcatcttgagcaactt
acctctgccactttgaataagttggaagagttcagggataaaacatcaacaggtctactg
tatgttatagagactcagaaggttcttgacttgaaaatagacctaatggcttcatacatc
attgttccccaaaatggcttttatgatttaaactcaaacttgcttattttggaccttggt
agtttgaagatgaccagtaagagtcgctgtaacctgcctcagttgaaaataggacaaaac
agccttgaagacattatgtcacgagcctatgaaagctttgatgtacagcttagcagcatg
cagttgctctatagcagacattatgagaactggaaggaggcccgctcacaaaagcattcg
gcactacatatcctagagccaatggacctcagagtggacttcagccgtgccatggtagtg
accgatgccagaatgcccaaaattaaattgtttggggaactgcctatactttctgtaaag
atttctgaccagaagttgaaaggtgtattggaactaattgacagtattcctaaacccgag
tcttctactgcaccatctgcttctcctaagaaagctcctagccaaaagtcgcctccaatg
actacacctcttcttgttgcaaagcatcctgatttagtggctctgcaatcaatcattgaa
tctgatttagaatcggaatctgatgaattttatgatgcccctaccagtcctgttgaagat
atgcctttctttgacgtctctaatggctcactgactaaggtcaacatcacgagaaggaag
aaactggcaaagcaagaaactctaaaaaacctgacagagtttcagatgagatttgagata
ccagttgtagttctgcagctgtgtagcctgtctgaagataccgagaccactgtcttgcaa
atggagattttggggcttggcacagagctaaatgttcgaacatttgatatgtctgcaaat
gcgtttctaagagagatctctttaaagtgcccccaatatacagatgatgaagagaaacct
gtttatcttatcacaactctggataataccacagatgatcttttaatcatggaatatatc
aaggcagatgttaatggtccagaattcaagacaacatacaaaaatattgaacaattaata
caggtgaacttttcgtctttggatgttcatctccacactgaggctcttttgaatactatg
agctttgtgaccaaccttatgcctcagtctgaaaaaaaggaacctgagcagccagtccaa
gaagtagttgaggaagaagatgaagaggaaaaaagggagggaccaagaaagaaactaaca
cttaaaaaatctaaatatgatgacgtcataagcctacatgtacgtgcgcaattggcatgc
cttcgtgttttcattcaagaacgggaatgtagaatttcggaaataagtattgaaggacta
gattccgaagtggtgatgaagaagacatcaatggatgtgctggcaaaattaaaaaatatt
gtcatcctcgattctgattgcgatgcccgatataaaaaggctgtttacattacgggaaaa
gaagtctttagttttaaaatggtgtcttacgttggtgctactgaaggtgcttcttacagt
gatatgaacatagtggacagtgcaatcaccctgacagtggggtgcatacaagtcatcttt
gtcaacaaatttgtttcagctcttctggccttcataaacaactttcaggcagctaaggaa
gcattaactgaagccacagtccatgccgcggaaatagctgccagtggcgtaaaagagatg
gcccagcacagtttccgacttgccttggacattaacattaaagcccctgttgtgattgtg
ccacagtcatctacatctacaaatgtactggttgcagatttaggtctcatcaacataaag
aaccatttttctattgtagcgccaaaaattcgcagtaatcttccgcctgtgattgactgt
atgatggtgaaactgagtgatctcaagttatacagaaccttgtttgaaaatggatccctg
gtttcagagctagaactgctccagccattaaatttggacattacaattgagcgtaatttg
gcagctgcctggtacagtgatattccagatattaaaataattggaaatctcaagccgatg
aatcttattcttgggcaggaagacttgaccatcattctcaggacattgaatgaaaatcta
ggagatacatcagacaagtctgatcctgagaaaaataaaactgaaaattcaagcagtggc
ggaaacagcccttctcatgttgcctcagggactacagtggtgacagcagctgtagttgaa
acatacacacctatgaaagtgaagacaactttgaagttggatttccagtttgactcactc
accttaaatttgtatagctccagtccaagctcccctctgacaaacaccagtgaaagggat
aatagtttaaaactcgcagaattcaagttgggccttatttcaacagctgtcaaaatgtcc
tctgatggatccatgagtgccgcagttaaacttacaaactgtatgttggatgacaagaga
caagctattcagaaggccactccacgaatgatggaaatgaagcgtggaacggagaagaat
gtaatggtagatgtctgctacaagcaaggcagagaaggcaccctgattgatgtgactgtc
cgtgacatctatatgtgtactagtgtggagtttctgtgtactgtggcagacattttcatt
aaagctaacgaacaaagttctgctgccctccgtagcagcaaacaaacttcaactccaagt
aaagaagcagctcttaaaccacaggtatctagaatggaaatgaatgtagtggttaagaac
ccagagttcgtgttcgtggctgatttgtcgagggcagatgccccagcactggtgcttaca
acacagtgtgaactgtcaatcaaaaatggtccggagcagcagcacatgaccgctgccgta
aaaaacttgcacgtgaaggcctgtccttttctgccagacaaaagagatggcaagatcacc
accattttacagccatgtgatgtgtttttccaaagtgttcagtctaatggtggtccgcag
aatattgaactctcaataaaatcactcatgttaaaggtctctccagtcattataaataca
gtgatcaccatcacatctgcactgtccacttccagaaaagagtcaataagtgaagccact
agtccagttccagcagatctttggaaaaagaaggatttaaaggatttaaagttctggttt
cttgaagaagaaaatgagaaggaaaacaaaaatagtggcattgaccagattgtcttaaca
ggagaaaaattagatttgagcattgactcaattatcataactctagaagcaggtgttggc
cacagaacactgcccattcttctagcaaagtcctcattcaagggaaatgttaaaaactgg
accacccttataaacctgtactgccaacttgagctagaggtgcattactacaatgaaata
tttggtgtatgggaacctttgctagaacctctagaagtggagagaagtgataactttcga
ccttggagtcttgaagttaagatgaaaaagaaattaaggaaacaaatatgtgaaattgat
ggtgaagaggagaactacaagataccagactatgttactgcaataaacattttttctaaa
gaccagctaaacatcacactgtccaaatgtgggattttaaccctgactaacctaggacag
gcatttgctgaagcagccagcaaaacatcagatatcttcaaaaaggatcaagctccattt
gtgatcacaaatttgctgggcctccatatttctgtcttttttccaagtgactcatttact
gctttaaatgttgatccaagcttaaagagcatagaactggatgatggggagaatcttagc
atggattatgtccgtaccaaagcccagactgatcagttttctgctatgaccagtcttagc
agcaaacacttctacatgcagctcactccttggaatcactcttctagtgacaaaattcct
ttaaccaaagtgggtcgaagcctttactgtgtaagacattccgattcgggagttgagcga
tacattgtctgtcaaatagattctgtggacggaacaaaatgtataacaatacggtcacca
ttacagattagaaatcactttatggtagcatttgaagtttatcatgaggacacatgtttg
ggcactgcagaaccagaaagtgactttaacatcccgttgtcaacttacagatctacactg
tgcttcaaaccagcccttgaagagtatgagaaatgtgagggaattgactttgaagagttc
ttaaaaaatcaaggctcactgttggggagaaaatgtcagtcccgtaaaaataacgcagat
tctttcattgtgaacattgtccctgtgattgacactctaatatcctctgcttgtaccgat
gagagatgggatctgccatatgttgttcatctgtggccaagtgttgttctacataatttg
cttccttatcaagtagcatactctcgtgagggtgccgataatgaccgtgtcgagatagaa
gatggatgctcagtccagatacacaatgcagttgtagatgaaaccaaactgagattgcga
ttatccaattatcttgatctcaactgggaagtcaagtatcacatccaaagcaagcagcca
gacattcacttcatcacattcctctgcatctcagagctggagaaggcagagctggacatt
gctgtccatgtcacttacactactgggcaaactattctagcgattcatagtccctattgg
atggtgaacaagaccgggagaatgctacagtataaggcggatgatgttcacagaaagcat
cccgctgatcataagaaacccctgcttttctccttcaagccaaagaacttttttcagaat
aacaaggtacagcttatgataactgacagtgaattgtctgatcccttttccttggatact
gttggtagccatggctctgtaaagtgcaagagtaaacagctggagtaccaggttggtgtc
tccattcatgccagcagtttcaatctcaccagaattgtcactttcactccattttttatg
attgccaatagaagcatttataaggtgtttatcattgaagagggctccgagagagttgtt
gtagtttgctcaggacagtgtgtacctttttggcctgaaaacagcagtcataaattgagt
gttcaggttgaaggctgtcagatacccccgaagaacattaattttaataaacaagacagc
tgcaccttacttcaccttggtgataagcttggaggtatattattggatgtcaccccaaaa
gactactccacagtcatcactttctcagactaccttgcaggttcagctccttttctatta
atcaacgatacaaagtctgagaatattgaattctgccagagctctgttaacggggagaac
gatgccttgcctccaggaaaagcagcattatttgcatgggaggaccccactagtgaaaga
gcattgtactggaaatgtggaacaagtgctggcactgttactcagatagaggacagagtt
gaatatcttagaatggagagtagcattgtctatttggtgtcctttctggagggtttacaa
cgaattgtgctttttactgaagacgaaaaagtttttcaagttacctatgacagtgaaaaa
gcagagcttgcagatcaggaggtcactgtgtcattgtctaacattggaatttcattagta
aataattattccaagcaagaagtctcctacattggtatcaccagttcagatgtagtttgg
gagacaaaaaagaagacaagatggaggccactgagtgtaaagcagacagacacactagaa
gcagcttacaaagattacagtgaatcttcccctacagataacagaattgtggagttggag
gctaattcacaggtgtgccttacacctacattgactggcatgaaattcctacaaccacct
ttgggaccagtgagaagaagctttctgccagctttgaaggtagaatactctgcctctgct
catcaagcatctatcagactacaggtctacagaatacagatacaaaatcaaattcctggg
gctatatttccttttgtattttaccctgttaaaccaccaaagtctgtgacaatggactca
gaacccaaaccatttactgacgtgagtattgtgatgagaacggctggacattctgaaata
tcacgtataaaatatttcaaggttttgatacaagaaatggatctgcgtgtagatcttgga
tttttgtacgcccttgctgacctttttacacagagcggaaaaatgcctaaagatcaagtt
gaggagcttttcaaaaaagacattgaatctattcaagcagaattaagcactgtgtcctca
attagtacctctcgactcagcctttatgaagattttcacatctctccaattaagcttcat
ttaagtttttctctgagcactggtggagatgatgggaataaagaacttcgagataaagag
ctaatacctgttcagtctttaaaccttctgctgaagagcattggtgccaccttgactgat
gtgcaggatgttgtgttcaagttggcattttttgagattcgaaatcaggtttattctaca
caggagctgcagtgggaagtcatcagacattactcgagacaagctataaaacaaatgtat
gttcttgtccttggactggatgtcttggggaatccttttggcttatttcgtgatttgtct
gaaggggtcgaagcattcttctatgaaccttaccagggtgccattcaaggaccggaggag
tttgttgagggaatggcgttgggagtaaaggctttagtggggggagctgttggtggctta
gctggagcagcatcccgaatcacaagtgctatggctaaaggtgtagcagccatcaccatg
gatgaagaatatcaacaaaagcggagagaagccatgaataagcagccaagtggcatcagg
gaaggtcttgcacgtggaggaaaaggccttgtatctggctttgtcagtgggattacaggg
attgttacaaaaccaattaaaggtgctcagaaagaaggcgcagctggattttttaaagga
atcggtaaaggattagtgggtgccgtaaccagaccaacaggaggcatcatagacatggcc
agtagcacgtttcagggaatcaagagagctactgactcttctgatgaggtggagagcctg
cgccccccacgatttattcatgaagatggcgttataagaccatataggctgagggaagga
actggaagccaaatgctacagaaaattgaaaatggaagatttgccaaatgtaaatatttt
gcacatgcaatggttaataacacggatttattaatggtgatgaaaagtggagtcctgttt
gttacaaagggcacttttgggcagcttacttgtgaatggcagtatagctttgatgagttt
accaaagaaccaatcattgtgaatggcagaaggttacgtattgaagcaaaggaacgagtg
aaatctgtttttcatgccaaagagtttggaaaaataataaattttaaaactcctgatgat
gccaagtggattctttctaaattggaagaagttagagatcttcatcgaaaagatacatga
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integrated database retrieval system
