Bufo gargarizans (Asiatic toad): 122923503
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Entry
122923503 CDS
T07965
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122923503 (HELZ)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
122923503 (HELZ)
3'-5' decay
Other 3'-5' decay factors
122923503 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
ResIII
UvrD-helicase
PAM2
zf_CCCH_4
PhoH
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_7
AAA_5
Helicase_RecD
T2SSE
Motif
Other DBs
NCBI-GeneID:
122923503
NCBI-ProteinID:
XP_044130263
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
GVLSKTLIGEPLNGMVTKDLSRLKALLAEIENVTNSVRSGFHTEDLEDGTQDGWQFRPPP
RGVTSSEEYTLCKRFLEQGICRYGAQCTSAHSQEELEEWQKRYASRLIRLKQQKENTQCS
GSYMESLIEKWMNSLSPERVLSECVEGVHVDYSPELSVTVTTKKSQQTWTFLLTCKPART
LQRVALLYDAHRPHFSIVAISAGDGNSQVPQEVPESCQEWVGEKMSQNGMDHCLYKVVIT
FTTEIFGTFRQTVVFDFGVEPVLMQRIMVDAASTEDLEYLMHARQQLLTTAKRWDSMSKT
IVEFDPNETTELERSLLSRYQIPLSADQLFTQSVLDKSLTRTNYQSRLHDLLYIEEIAQY
KEVSKFNIKVQLQLVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVN
AVYLLPVSKEKSAQSQGSKEKVYEAVIEEKTKDYIFLRICKDCCEELRLRSDREMQVELQ
FQLNRLPLCEMHYALDRIRDNGILFPDLSATPPIPWSPNRQWDELLDPRLNAKQKEAILA
ITTPLSVQLPPILIIGPYGTGKTFTLAQAVKHILKQQDTRVLICTHSNSAADLYIKDYLH
PYVETGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSTHATFQMPQKEDIVRHRVVVVTL
STSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKSTRIVLAGDHMQLSPFVYS
EFARERNLHVSLLDRLYEHYPADFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP
AHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGV
VTPYADQVFRIRAELRKKRLSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRK
EQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWEQFLTICH
ENRSLHGITFEQIKSQLEALELKKTYVLNPLAPEFIPRALRQQQAANAAKQQQSPPKGKG
HHNQSEHFQGDGMVQPNPSVLIGNPIRAYTPPMGAHTNLGKSPSPVQRIDPHTGTSILYV
PAVYGGNMVMSVPLPVPWPPNYQGRFSVDPRLMTHPAMAYNMNLLQGHGRGSPIPFGLGH
HSPVNVGQQVPHTDKDQHELSRNGKSENNPSADMNKLRTPEKKPLDCKPVDLDPNTQTRS
PESRANLAFPNPKYHRKDNPPQRPMNIHLTPPHPQYPMPSRHFPHVSPLQRPQFPLQQQN
LLSQQQNHLPELQNQIPPPPQGPVVPQQNHLMQQPPPQASQLSPAFQPNQSFFNNPIPHR
PPSPGVDGMIPEQPPPTIMQDVNNPLRSVAHNNQLMSSHLNSYMEDGPPAMSAGEALDRL
HSNVALETLRQQQTRIQQWNEHNAFLSQANLTYPHHPHLQAMGLAQQQLIRPNWKIPNSG
EEEPEITYSRFQEFLRELSQHEQSGDHRDLTEMPPPQSRLLQYRQVQPRSPPALASPSSG
HSGHFPSFSENSRGDMDMSNNPTFPAHMANVYSSPYTMPSEHMTPPPPMKYLQHDGSWAY
ANLQQNPLMGQGFHYGMPPLQHRPPQNPFIHVQNHQPPAGQETFHPAAPRAVSASSLHNL
EEYEPRGPGRPLYQRRISASSAHPGSEELAACQEPLGQCKEIQDPNKPPSYNYSSPELWV
NAASSVPYQNIPCNGANPSGPPRDMLVAPQKMVKPPDEHLKAENLQMSSSFNYNVLQHLG
QFPPLMSNKQNAEPNGTAAAQQNAGANKPTMSYASALRAPPKPKPPPEQAKKNSDPLSLF
QELSLGSSSGNNGFYSYFK
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
ggtgtattatccaagactctgatcggagagccactgaacggtatggtgaccaaggacctg
tcacggttaaaggctctgcttgctgagatcgagaatgtcaccaactccgttcgttcgggt
tttcacacggaggatttggaagacggtacacaggatggatggcagttcagacctcccccc
cggggtgtcaccagcagtgaggagtacacactgtgcaaaaggttcttagaacaggggatc
tgccggtatggagcgcagtgcacctcagcgcactcacaggaggagctggaggaatggcag
aagcgatatgcctcgcgcctcatccgtctcaagcaacagaaggaaaacacacaatgttca
gggagctacatggagtccctgatcgagaagtggatgaattccctctcgccagagagagtg
ctcagtgagtgtgtggagggcgtacacgtggattacagtcctgagctctctgttaccgtt
accaccaaaaaatctcagcagacgtggacgtttctcctgacgtgtaagccggcgaggacg
cttcagcgcgtggctctgctgtacgacgctcacagacctcattttagtattgtggcaata
tccgctggagacggcaatagtcaggtgccccaggaggtgcccgagagctgccaggagtgg
gtcggcgagaagatgtcgcagaacggcatggaccattgcttgtacaaagtcgtgatcacc
tttaccacagagatattcggcactttccgccagactgtagtgtttgactttggtgtagag
ccggttctgatgcagaggattatggtggacgcggcttcaactgaagatcttgaatacttg
atgcacgcccgtcagcagctgctaacgaccgcgaagcgctgggactccatgtctaagacc
attgtggagttcgatcccaacgagactactgaactagagcgcagcctcctcagccgatac
caaatcccgctctccgccgaccagctgtttacacagtccgtgctggacaagtcgctgacc
aggaccaactaccagtcccgcctgcacgacctgctttacattgaagagattgcacagtac
aaggaagtcagcaagtttaacatcaaggtccagctgcagctagtggcgagcttcatgctg
acgggtgtttccggaggagccaaatacgcccagaacgggcagcttttcggtcgctttaaa
ctcactgagacactttcagaggacacgctcgccggcagactcgtgatgaccaaagtcaac
gccgtgtatctgctgcccgtctcgaaggagaagtccgcacagagccaagggagcaaagag
aaggtgtacgaagcggtcatcgaggagaagaccaaggactacatcttcttaagaatatgc
aaggattgctgcgaagagctgcggctccggtccgaccgggagatgcaggttgagctccag
ttccagctgaaccggctgcctctgtgtgaaatgcactacgccttagacaggatacgggat
aacggcattctctttccggatctgagcgcaacgcccccgataccctggagccccaacaga
cagtgggacgagctcttagatccccggctgaacgctaagcagaaagaagccatcttggcg
atcactacccccctctccgttcagctgccccctatcctcatcatcggcccttatggtacc
ggcaagacgttcaccctggcccaggctgtgaagcacatcctaaaacagcaggataccagg
gtcctgatttgcacccactctaacagcgccgctgacctctacatcaaggattatttacat
ccatacgtggaaacagggaacccgcaggcccgtccgctcagggtatacttcagaaatcgc
tgggtgaagacggtgcacccggtcgtacaccagtactgtctgatctccagcacacatgcc
accttccagatgccccagaaagaagacatagtgcggcacagggtggtggtggtgacgctc
agcacatcgcagtacctctgccagctggatctggagcccggcttttttacccacatcctg
ttggatgaagcagcacaagccatggaatgtgaaaccatcatgcctctggccctggccaat
aagagcacgcggatcgttctggccggagatcacatgcagctcagtccgttcgtatacagc
gagttcgccagagagcgtaacctccacgtgtcgctgttagaccgcctgtatgaacattac
cccgccgacttcccgtgtaggatcctgctgtgcgagaattaccgatcccacgaggccatc
atcaattacacgtcggagctcttctatgaggggaagttgatggccagcggcaagcagccg
gcccacaaggacttctaccccctgaccttcttcaccgctcgaggggaggacgtccaggag
aagaacagcacggccttctacaacaacgcagaggtatttgaggtggtggagcgcgtggag
gagctgaggaggaagtggccagtggcctggggcaagctggacgacggcagtattggggtg
gtgaccccctatgccgaccaggtgttccggatccgggccgaactgcggaagaagcggctt
tcggaagtcagtgtggagagggtgctcaacgttcagggtaagcagttccgcgtcctgttc
ctcagcacggtccgcacccgccacacctgcaaacacaagcagacccccatcaaacgcaag
gagcagctcctggaggactccaccgaggacctggactatggcttcctctccaattataag
ctcctgaacacggccatcacccgggcccagtccctggtggcggtggtgggcgaccccatc
gctctgtgctccatcgggagatgcaggaagttctgggagcagttcctcacgatttgtcat
gagaatcgcagtcttcacggcatcacattcgagcagatcaagtcccagctggaggcctta
gagctgaagaagacctacgtgctgaacccgctggcgccagagttcatcccgcgggcgctc
cggcagcagcaggcagcaaacgccgccaaacagcagcagtcaccgccaaagggcaaaggt
catcacaatcagagcgagcactttcaaggggatggaatggttcagcccaatccttctgtc
ctgatcggcaatcccatccgggcgtacaccccacccatgggtgctcacaccaacctgggc
aaatcccccagccccgtgcagaggatagacccccacaccggcaccagtattctctacgta
cctgccgtctacgggggcaatatggtcatgtccgtgcctttacctgtcccgtggcccccc
aactaccagggtcggttttccgtggacccccgcctcatgacgcacccggccatggcctat
aacatgaacctcctccagggccacggtcgcggatctcccatcccgttcggcctcggccac
cactcaccggtcaacgtcgggcagcaggttccgcacacggacaaagatcagcacgagctc
agccgcaatggtaaaagcgagaacaatccgtcagccgacatgaataagctgcgcacccct
gagaagaaaccgctggactgcaaaccggtggacttggacccaaacacacaaacgagaagc
ccagagtctcgagccaacctcgccttccccaaccccaaatatcaccgcaaagataatccg
ccccagaggccgatgaacatccacctgacccccccgcacccgcagtaccccatgcccagc
cgccacttcccacacgtctcccccttacagcggccgcagtttcccctacagcagcagaac
cttctgtcccaacagcagaaccatctcccagaactgcagaaccagatccctcctcccccg
cagggacccgttgtcccgcagcaaaaccatttaatgcagcagccgcccccgcaggcttcc
cagctgtcccctgctttccagcccaatcagtccttctttaataaccccattcctcaccgc
cccccatcgcccggcgtggacggcatgatcccggagcagccgccaccgaccataatgcag
gacgtcaataacccgctccgctctgtggcccataacaatcagctgatgtcatcgcacctc
aacagctacatggaggacgggcctccagccatgagcgcaggcgaggctctagatcgtctg
cacagtaacgtggcgctggagacgctgaggcagcagcagacgaggatacagcagtggaac
gagcataacgccttcctgagccaagccaacctcacatacccgcaccacccccatctacaa
gcaatgggtctggcccagcagcagctcatcaggcctaactggaagatcccaaacagcgga
gaggaggagcctgagatcacatattccaggttccaggagtttcttcgggaactttctcaa
cacgagcagagtggtgatcatcgagacctcacagagatgcctcctcctcagtccagactg
ttacagtaccgacaggtccagccccggagcccaccagcactcgcctccccctcctccggc
cacagcggccacttccccagcttcagcgaaaacagccgaggagacatggacatgagcaac
aatcccaccttcccagcgcacatggccaacgtgtacagcagcccctacaccatgccatcg
gaacacatgacgccccctccaccaatgaaatacctgcaacacgacggctcctgggcctac
gccaaccttcagcagaatcctctaatggggcagggatttcattacggtatgccccctcta
cagcacagaccaccacaaaacccgttcatccatgtacagaaccaccagcccccagctggt
caggaaacatttcacccagccgcgccccgcgccgtctccgcctcttcactccacaatcta
gaagagtatgaacctagaggacccggcaggccgctataccaaagaagaatctcggctagc
tcggcgcaccccggttcggaagaattagccgcttgtcaagaacccctcggtcaatgtaaa
gaaattcaagaccccaacaaacccccatcatataattattcatctcccgaactctgggtc
aacgcagcatcgtcagtcccgtaccagaacattccgtgcaacggcgccaacccatccgga
ccgccccgggacatgttagttgctccccagaaaatggtgaagccccctgacgagcatctc
aaagcggagaacctgcagatgtccagctccttcaattacaacgtcctgcagcatctgggc
cagttcccccctctcatgtccaacaagcagaatgcagaacccaacggaaccgcagccgcc
caacagaacgcgggcgccaacaagcccaccatgtcttacgctagcgccctgcgggctccg
cctaagcccaaacccccacccgaacaggcaaaaaagaatagcgaccccctgtctttattt
caggaacttagcttagggagttcatcaggtaacaacggcttctattcctattttaagtag
DBGET
integrated database retrieval system
