Bufo gargarizans (Asiatic toad): 122924325
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Entry
122924325 CDS
T07965
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122924325 (DDX54)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122924325 (DDX54)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
Pre-60S particles
Helicases
122924325 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
122924325
NCBI-ProteinID:
XP_044131231
LinkDB
All DBs
Position
1:complement(510664614..510706409)
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AA seq
849 aa
AA seq
DB search
MAQKRRKGARGAKKKQQRDGGAEDSDTGEFDVSAGVPEHDEVHLPSFPAADAGSDTELDT
RQLVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKVVPIILDGKDAVAMAR
TGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKFTGLKTALIL
GGDRMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLRSVEYVVFDEADRLFEMGFAEQL
QEIISRLPDTRQTLLFSATLPKMLLEFARAGLTEPVLIRLDVDSKLSDQLTLSFLHVRAE
DKPAVLLHLLRCIVKPQEQTVIFVATKHHAEYLRELLDMQGIPCSHIYSSLDQTARKINL
GLFLHGKVCALLVTDVAARGIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSL
VAPDETPYVYDLHLFLGRPLKLAGDTGTCSETDLDGVMGRVPQSVIDDEDALLITDRERS
LELQNLHHVAENAYKQYSKSRPAPAPESIKRVKEANYTQLGVHPLFWSRLGGEEMQRLKF
VDCIKTYKSKATIFEINATNKTSASEVMRAKRSRDFGVITKFQRLQEEKVKATVPSVLGA
KSSVASSQDSAEETIEEVFSQVLGKRKREDGGQNEVNKKNKGGVSQDSEYYVPYKPKDFE
SERGLSIAGNSFEQAAAGAVLDLLGDHTEDLRKTKHVMKWDRKKKKFVGAGGHEDKKKIK
TESGRVISSSYKSNIYEDWKKRYKIDDQDSEEEEERQTANPHRKGRGGRKGSRGTPRSEA
KGPHGKTKSELRNKQQILKQRKAKEKQLFLQKGGMKNLKNKTRQKVHQMKKSAFGRGKSN
GFKKGKMKR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagaggcgcaagggagctcggggggcgaagaagaagcagcagcgggacgga
ggggcggaggacagcgacaccggggagtttgatgtcagcgcgggggtcccggagcacgat
gaggtgcatctcccatcgttcccagcagcagatgctggctcagacacagagctggacacc
aggcagctggtccgagctcagaacaagaagaaaaagaaatcgggaggtttccagtctatg
ggtcttagctatcctgtctttaaaggagtgatgaagaagggttacaaggtgccaacaccc
attcagagaaaggtagtcccaattattctggatggcaaagatgcggttgctatggctagg
actggcagtgggaagactgcctgcttcttgatcccaatgtttgagaaactgaaggctcac
agtgcccagactggagttcgtgggctcatcttgtcacctaccagagagcttgccctgcag
acgctgaaattcactaaagagctcgggaaatttaccggcttgaagactgcccttatcttg
ggtggagacaggatggaagatcagtttgctgctctccatgaaaacccagacataattatt
gccacgcctggtcgtctaatgcacgtagctgttgaaatgaaccttaagctgcgcagtgta
gagtatgtcgtgtttgatgaagcagaccggctgtttgagatgggctttgctgagcagctg
caggaaattatttcccgtcttccagacactcgtcagactttgctattctctgcaacctta
cccaagatgctactggaatttgcacgggcaggtctcactgaaccggtgctgatccgtcta
gatgttgactcaaagcttagtgaccagttgacgctgtccttcttacatgtgcgggcagag
gataaacccgctgtgctccttcatctcctgcgctgcattgtcaaacctcaggaacaaaca
gttatctttgtggctacaaaacaccatgcggagtacctcagagagttgcttgacatgcaa
ggtatcccctgttcccacatctacagttctcttgatcaaactgctaggaagattaacctg
ggcctgttcctgcatgggaaagtttgtgcacttttggttactgatgtggctgctcgaggc
atagacatacccatgttagacaatgtcatcaattataatttcccacctaaggcgaagctt
ttcctccatcgtgttggtcgagttgcgcgagcaggtcgaagtggcacagcatattctctt
gtagcaccagatgaaacaccatatgtctatgatcttcacctcttccttggaaggcccttg
aaactggcaggagatacagggacttgttcagaaacagacctagatggcgttatgggacga
gtaccccagagtgtgatagatgatgaagatgctctgctcatcacagaccgtgagaggtcc
ttggagctgcaaaacctccatcatgtggctgagaatgcatacaagcaatacagcaagtct
agaccagctcctgctcctgagtccataaaaagagttaaagaagccaattacacccaactg
ggcgtccaccctctcttctggtctcgtcttggtggagaagaaatgcagagattgaaattc
gtggactgcattaaaacgtacaaatccaaagcgaccatctttgaaataaatgccactaac
aagacctctgcaagtgaggtgatgcgagcaaaacgaagtcgggattttggagttatcacc
aagttccagcggttgcaggaagagaaagtgaaggctacggtgccatctgtgcttggtgcc
aaatccagtgttgcgtccagccaggacagtgcagaagaaaccattgaggaggtcttttca
caagtacttggcaagaggaagagagaagatggaggtcagaatgaagtgaacaagaagaac
aagggaggtgtttctcaggattcagaatattatgttccatacaaacctaaagactttgag
agtgagcggggacttagcatcgcaggcaacagctttgagcaggcagcagcaggagcagta
ctggatttgctgggtgaccatactgaggatctaaggaagactaagcacgtcatgaagtgg
gacagaaagaaaaagaagtttgtgggagcaggaggacatgaggataagaagaaaataaag
acagagagtggacgagtcattagcagttcttataaatctaacatatatgaggattggaag
aagagatacaagattgatgatcaggattctgaagaggaagaagaaagacagactgcaaac
ccacatagaaagggcagaggtggacgtaaaggctctcgtggaacacctcgttctgaagct
aagggaccccatggcaagaccaaatctgagctgcgcaacaagcagcagattctgaaacag
aggaaagcaaaggaaaagcaactcttcttacaaaaaggtggaatgaagaatctgaaaaac
aaaaccaggcaaaaggtacaccagatgaagaaatctgcgtttggcaggggcaagagcaat
ggtttcaagaaagggaaaatgaagagataa
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