Bufo gargarizans (Asiatic toad): 122924656
Help
Entry
122924656 CDS
T07965
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122924656 (CHD1)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122924656 (CHD1)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122924656 (CHD1)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
122924656 (CHD1)
SLIK complex
122924656 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
122924656
NCBI-ProteinID:
XP_044131911
LinkDB
All DBs
Position
1:633410578..633538910
Genome browser
AA seq
1799 aa
AA seq
DB search
MNGKSDEESNGSANSSRSDDDSGSGSGSSSGSSSDGSSSRSGSSDSDSGSESGSQSESES
DTSKEKKVVPSKPLRMDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQLQQRPPASSNSGS
DEESSSSDEDSDENSSSDNKKKQPKDEDWQMSSSGSGSSSSSASSSSDSDTGGDRQKSSS
RDSESDYEPSHKVKNKKSQNRSKAKNGKKNTGQSKMGADSSDEDFDKRGSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEDEFETIERVMDSRFGRKGVTGGTTTIYAIEADGD
PNANFDKTKEAGETQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKEQEKKRW
LKSASPEDIEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYFCKWQGLPYLECS
WEDGALIGRKFQAHIDEYFSRNQSKTIPFRECKVLKQRPRFVALKKQPPYIGANETMELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFMIVVPLSTL
TSWQREILIWAPLMNAVVYLGDIGSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEHFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFYNRQEALQH
LIRSSGKLILLDKLLVRLRERGNRVLIFSQMVRMLDILAEYLKARQFPFQRLDGSIKGEI
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKSSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSATPFNK
EELAAILKFGAEELFKEPEGEEEEPQEMDIEEILNRAETRENEVGPLTVGDELLSQFKVA
NFSTMEEDDIVEPERNSKSWEDIIPSDQRRRMEEEERQRELQEIYLLPRMRNCAKQASFN
GSEGRRSRNRRYSGSEDSEDSDSDTKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSSERAGGRRGKMKGPTF
RISGVQVNAKLVSSHEEELIPLHKSIPSDPEDRKRYVIPCHTKAAHFDIDWSKEDDSNLL
IGIYEYGYGSWEMIKMDPDLNLTQKILPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEA
QRLSGGNSKRRKARAKKSKTVKPVKIEEVKSESSPPTSEKSEEEEEEEDEDDEDKEEDAS
VKTNSKKIKAEKENEQQTEPEGPLKKEPEDKKEVKESKKEVKKERKDRDEKKEEKDKKET
KTKEPVKEIKEEKVNDVKPEKEKAKKNISAETPVHITASSDPIPISEEAEELDQKTFSVC
KERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYANPEQIKQWRKN
LWIFVSKFTEFDARKLHKLYKHAIKKRQESQHNDQNASSSMNTIVRHPDVERLKENTNHD
DSSRDSYSSDRHLSQYHDHHHKDRHHSDAYKKSDSRKRPYSNFSNGKDHRDWDHHHKQDR
YHSESKHRKLDDHRSRDHRSNIEENVKDRSLSDHRSHSEHRLHSDHRSGSDYSHHKSSRD
YRYHSDWQLDHRASSSGPRSPLDQRSPYDSRSPLGRRSPFECSSDHKSTPEHLWSGRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaagagtgatgaagaaagcaatggcagtgcaaactcgagccgatcagatgat
gattctgggtcgggatctggttctagttcagggagcagcagtgatggaagcagtagtcga
tctggaagcagtgactccgatagcggatcagaatcgggcagccaatcggaatcagagtct
gacacctcaaaagaaaagaaagttgtgccatcaaagccactgagaatggatggagcagag
ttctggaaatccaatcccagcattttagctgtacagagatctgcaatgttgagaaaacag
caactgcaacaacagcagcaattgcagcagaggcccccagcatcttcaaacagcggctca
gatgaggaatcctccagcagtgatgaagactcagatgagaattcctcaagtgataataaa
aagaagcaacccaaagatgaagattggcagatgtccagctcaggttctggtagttcctca
tcatcggccagttccagttcagattccgacacagggggggatagacagaaaagcagcagt
agggacagcgaatctgattatgaaccgagccataaagtaaaaaacaagaaatctcaaaac
aggtccaaagctaaaaatgggaagaaaaatactggccagtcgaaaatgggggcagattcc
tctgatgaggactttgataagagaggatcacggcggcaggccacagtaaatgtaagctac
aaagaagatgaggaaatgaaaacggactctgatgacttgttggaagtgtgtggggaagat
gtcccacaaccagaggaagatgagtttgaaacaattgaaagagtaatggattcacggttt
ggtcgcaaaggagttactggtggcaccacaactatttatgctattgaggctgatggtgat
cccaatgccaatttcgacaaaaccaaggaagctggtgagacgcagtatttaattaaatgg
aaaggttggtcccatatccataatacttgggaaactgaagaaactctaaagcaacaaaat
gtgaaaggcatgaagaaactggacaattacaagaaaaaggagcaggaaaaaaaaagatgg
ttgaaatctgcttctcctgaagatatagagtattataactgtcaacaggaacttactgat
gacctccataaacagtatcaaattgtggaaagaattatagctcattccaatcagaaatct
gcagcaggatacccggattatttttgcaagtggcaggggcttccgtatttagagtgcagt
tgggaagacggtgcacttattggtagaaaatttcaggcacacattgatgaatacttcagt
aggaatcagtccaaaacaattccttttagggaatgtaaggtcttaaaacagaggccgcgg
tttgtagctctgaagaagcagccgccctacattggcgcgaatgagacaatggagttaaga
gactatcaactaaatggcttaaactggctggcacactcatggtgcaaaggcaacagttgt
attctggctgatgaaatgggattgggaaaaacaattcagaccatttcattcttgaattat
ttgttccatgaacatcaactttatggaccatttatgattgtggttcccctgtctacttta
acctcctggcaaagagaaattctgatttgggctcccttaatgaacgctgtggtttacctg
ggggacattggtagtagaaatatgatcaggacacacgagtggatgcaccctcagacaaag
aggttaaagttcaatattttattaacaacatacgaaatccttcttaaggacaaatctttt
ctaggtggtcttaattgggctttcataggagttgatgaagctcatcggctgaaaaatgat
gattccctgctgtacaagaccctgatagactttaagtcaaatcatcgtcttctcatcact
ggaacgcctttgcagaattctcttaaagaattatggtctttgcttcacttcattatgcca
gaaaagttttcctcttgggagcactttgaagaggaacatggtaaaggcagagaatatggc
tatgccagtcttcacaaagaacttgagccattccttctaagaagagttaagaaagatgtg
gaaaagtctttaccagcaaaagtagaacagattttgagggttgagatgagtgctgtgcag
aaacagtactataagtggatcttaacacggaattacaaggccttgagcaaaggttcaaaa
ggaagtacctcaggatttttaaacatcatgatggagcttaaaaagtgttgtaaccattgc
tacctcattaaaccacctgaagataatgaattctataacagacaagaagctttacagcac
ttaattcggagtagcgggaaactaattcttctggacaagttgttagtacgtctgagagaa
cgtggtaaccgagtcttgattttttctcaaatggttcggatgctggacatccttgcagaa
tatttgaaggcacggcagtttccttttcagagattagatgggtcaatcaaaggagaaata
agaaagcaggcactggaccattttaatgcggaaggatcagaggacttttgctttctgctt
tctacccgtgctgggggtcttggaattaaccttgcttcagctgatacagtagtcattttt
gattctgattggaatccccaaaatgaccttcaggcccaagcaagagctcatcgaatagga
caaaagaaacaggtcaatatatatcgcctggtcaccaaaagctctgtagaggaagaaatt
attgaaagagcgaagaagaagatggtgctggatcaccttgtaattcaaagaatggacacc
actggcaagactgttttacacactggatcaacaccatctagcgctacaccatttaacaaa
gaagagcttgctgctattttaaagtttggtgctgaagaacttttcaaggaaccagaagga
gaggaggaagaacctcaggaaatggatattgaggaaatcttgaacagagcagagacccgt
gaaaatgaggtcggaccattaactgtgggcgatgagctactttcacagtttaaggttgcc
aacttttcaacaatggaggaggatgatattgtggagcctgaacgtaattccaagtcctgg
gaagacattattccctcagaccagagaagaagaatggaggaagaggaaagacaacgggag
ctacaagaaatctatttgcttcccaggatgagaaactgtgcaaagcaggcaagctttaat
ggaagcgaaggtagaagaagtcggaatagaaggtattctggctctgaagactctgaagat
tcagactctgatacaaaacgacccaagaaacgaggacgaccaagaaccataccgagggaa
aacattaaaggttttagtgatgccgagatacggaggtttattaaaagttataaaaaattt
ggtggacctctggaaaggttagatgctatagctcgcgacgcagagttggtggataaatca
gaaactgaccttcgtagacttggagaattggtgcacaatggctgtatcaaagctctgaag
gatagttctagcagtgaaagggcaggtggaagaagaggaaaaatgaaaggaccaacgttt
cgtatctcaggagtacaagttaatgcaaagctggtcagttctcatgaagaagagctgatt
ccgttgcataaatctattccttcagatcctgaggatagaaaaagatatgttattccatgc
cacacaaaagcagcacactttgatattgactggagcaaagaagatgactcaaatcttttg
attggaatctatgaatatggttacggcagttgggaaatgataaaaatggatcctgacctc
aacttaacacaaaagatattgccagatgatccagataagaagccccaggctaagcaatta
cagaccagagcagactacctcattaaactcctgagcaaggaccttgctaaaaaagaagca
cagcgactttcaggaggaaattcaaaacggagaaaagcacgagcaaaaaagagtaaaact
gtgaagcctgtgaaaattgaagaagttaaaagtgaatcttcaccgccaacttcagaaaag
tcagaggaagaagaggaggaggaagatgaggatgatgaagacaaggaagaagatgcttct
gtgaaaacaaacagtaaaaaaattaaagctgagaaagagaatgagcagcaaactgagcca
gaagggcctttgaaaaaggagcctgaagacaagaaggaagtaaaggagagcaaaaaagag
gtaaagaaagaaaggaaagatcgtgatgaaaagaaagaagaaaaggacaaaaaggaaaca
aaaacaaaagagccagtcaaagaaattaaagaagaaaaggttaatgatgtgaaacctgaa
aaagagaaagcaaagaaaaatatttctgctgaaacccctgttcacataaccgcaagcagc
gatccaattccaatctctgaagaggcagaggaacttgatcagaagacgttcagtgtttgt
aaagagagaatgagaccagtgaaggctgcattaaaacagttggatcgaccagaaaaaggg
ctctctgagcgtgaacagcttgagcacacccggcagtgcctgattaaaattggagatcac
ataacagaatgcttgaaagaatatgcaaacccagaacaaataaaacagtggaggaaaaac
ttatggatatttgtatccaagtttactgaatttgatgcccgtaaactgcacaaactgtac
aaacatgctatcaagaaacgtcaggaatctcagcacaatgaccagaatgccagcagcagc
atgaacacaatcgttcgacatccagatgttgaaaggttaaaagaaaacacaaaccatgat
gatagcagcagagatagttattcctctgaccgccatctgtcacaatatcatgatcaccat
cacaaggacagacaccacagtgatgcttataagaagagtgattcacggaaaagaccttat
tctaacttcagcaatggtaaagaccatagagactgggatcatcaccacaagcaggacagg
taccacagtgaaagcaaacacagaaaattggatgatcacagaagcagagatcataggtca
aacattgaagaaaatgtaaaagacaggtctctttcagatcacagatcccattctgaacac
cgattacattcagaccaccgatccggttctgactacagccatcacaaatcttccagggat
taccggtaccattcagactggcagttggaccatagagcttctagtagtgggccaagatct
ccattggaccagaggtctccttatgattctagatcacctttaggtcgtagatcacctttt
gaatgttcttcggatcataaaagtactcctgaacatttgtggagtggccgcaaaacataa
DBGET
integrated database retrieval system
