Bufo gargarizans (Asiatic toad): 122924701
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Entry
122924701 CDS
T07965
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122924701 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122924701 (TNPO1)
03009 Ribosome biogenesis [BR:
bgar03009
]
122924701 (TNPO1)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122924701 (TNPO1)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122924701 (TNPO1)
Pre-60S particles
122924701 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
TOR1L1_N
Arm
Vac14_Fab1_bd
TPR_IPO5
Cnd1
IBN_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
TPR_TTI1_C
Dopey_N
UNC45-central
HEAT_DAAF5
RTP1_C1
VPS15-like_hel
ARM_ARMC5
DUF3689
ARM_TBCD
Motif
Other DBs
NCBI-GeneID:
122924701
NCBI-ProteinID:
XP_044131984
LinkDB
All DBs
Position
1:658811688..658891428
Genome browser
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRSVQQKLEQLNQFPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKIECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCGLLDSEDYNTCEGAFGALQKICEDSAEILDSDLLERPLNVMIPKFL
QFFKHSSPKIRSHAVACVNQFIIGRTQALMLHIDSFIENLFALATDEEPEVRKNVCRALV
MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKEVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIRPRFHRSRTVAQPHEEDGIEEDEDD
EDDLDDDDTISDWNIRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDMYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNVLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLQQEMVHNNQPDQYESPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKVCIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGAEMQPYVPLVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPGGVVQDFIFFCDAVA
SWINPKEDLRDMFCKILHGFKNQVGEENWRRFSDQFPPPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagccggacgagcaggggctccagcagatcctgcagctgctcaaa
gagtcccagtccccggacacgaccacgcagagatccgtgcaacaaaaattggagcagctt
aaccagtttccagacttcaataattatttaatatttgttctcaccaagctaaaatctgaa
gatgaacctacaaggtctttgagtgggctgatcctgaaaaataatgttaaagctcatttt
cacaattttcctaatggagttaccgactttatcaagattgaatgtctgaataacatcggg
gactcgtctcccttaattcgagcgacagtgggtatcctgatcacaacaattgcttcaaag
ggagagctacagaactggccagagctgttgccaaaattgtgtggtctgttggactctgaa
gattacaacacatgtgaaggagcttttggagcccttcagaaaatctgtgaagactctgct
gagattttggacagtgatcttttggaacgacctctcaatgttatgatccccaagttcttg
cagttctttaaacatagtagtccaaaaataaggtcgcatgctgttgcctgtgttaatcag
ttcatcattggaagaacccaagctcttatgctgcatattgactcctttattgagaatttg
tttgctttggccactgatgaagaaccagaagttcgtaaaaatgtctgcagggctcttgtc
atgctgcttgaagtccgaatggaccgcctgcttccccacatgcacaatattgtggagtac
atgctgcaaaggacacaggatcaagatgaaaatgttgctttggaggcatgcgagttttgg
ctgactctggctgagcaacccatttgtaaagaagttctgtgcaggcatcttacaaagttg
ataccagtcttggtaaacggaatgaaatattcagagatagatattatattgctcaagggt
gatgtagaagaggatgaagcggttcctgacagtgagcaggacatacggcctcggttccac
aggtcacgaacagtggctcagccacatgaagaagatgggattgaggaggatgaagacgat
gaggatgaccttgatgacgatgatacgatatctgattggaatataagaaagtgttcagct
gctgctcttgatgtgcttgcgaatgtgtttcgggatgaacttttgccacacatattgcct
cttttgaaagaattacttttccatcctgaatgggtagtaaaggaatctggaatattggtt
cttggtgcaattgcagaaggttgcatgcagggtatgatcccatacctccccgagctcatc
cctcaccttattcagtgcctttctgataagaaggctcttgtgcgctccatcacctgttgg
acccttagtcgctatgcacactgggtagttagccagcccccagacatgtatttaaaacca
ttaatgacagagctgctaaaacgaattctcgacagcaacaaacgagttcaagaagctgct
tgcagtgcctttgctaccttagaagaggaggcttgtactgagcttgtcccctacttggct
tacattttggatactttggtcttcgcattcagcaaataccagcataaaaacctgctcatc
ctttatgatgctataggaacgctagcggattctgttggacatcacttaaataagccggaa
tatattcagatgctgatgcctccactcatccagaaatggaatgttctaaaggatgaagac
aaggatctcttccctttacttgagtgcctatcttctgttgctactgcacttcagtctggt
ttcttaccttactgtgaacctgtgtaccagcgttgtgtgaacttggtacaaaagactctt
caacaagaaatggtgcacaataaccaaccagaccagtacgagtctccggataaagatttt
atgattgtagctctggatttactcagtggattggcggaagggcttggtggtaacatagaa
cagcttgtcgcaagaagcaacatccttacgttaatgtaccagtgcatgcaggataaaatg
ccagaggtacggcagagttcttttgcattattaggggatctcactaaggcttgttttcaa
catgtgaaagtgtgcattgctgatttcatgcccattttaggaacaaacttaaaccctgag
ctaatttctgtgtgcaacaacgccacttgggctattggtgaaatttccatacaaatggga
gctgaaatgcagccgtatgttcccctggtgttgcaccaacttgtagaaataattaacagg
cccaacacaccaaagacactcttagaaaatacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgtacttca
ttgcggaatatcagagacaacgaggagaaggactccgctttccgtggtatttgtacgatg
atcactgttaatcctggaggtgtagttcaggattttatttttttctgcgatgctgttgca
tcttggattaatccaaaggaagacctccgggacatgttctgtaagattcttcatggattt
aaaaaccaagtaggggaagaaaattggagacgcttctcagaccagtttccgcctcccctt
aaagaacgtcttgcagcttactatggagtttaa
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