Bufo gargarizans (Asiatic toad): 122925693
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Entry
122925693 CDS
T07965
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122925693 (PDZRN4)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122925693 (PDZRN4)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122925693 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Chp1_domII
Motif
Other DBs
NCBI-GeneID:
122925693
NCBI-ProteinID:
XP_044132975
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All DBs
Position
2:285198299..285388357
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AA seq
774 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLLKATHEEAVEAFRNAKDPIVVQVLRRTPVNR
AHGSSQEVQLVNVSTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
DGNEYLSSLPADGDRTEDFEYEEIELCRLNNQERLGLTVCYRTDDEEDTGIYVSEVDPDS
IAARDGRIREGDRILQINGQDIQNREEAVALLSNDECQKIVLLVARPDLPLDEGWLDDER
NEFLEELNMQILEEQRHEAMQYPADEVKQQKKPEEEDGTTDTATSSSNNHEKDSGVGRTD
ESLHHDESSEMENIVRNHITHLQKNAGLRQSQDTLGSSEIHCNESLISGEYIDSDLTVNQ
EEDCDRFRQLLELKCQIRNRGEYDLYYSSSTIECSRSEHGVEHELQLLNEELRSIELECQ
SIMQAHRRKNVNNQSGDIWEIHDDEFCNYNTSIEVQRSKVGMREHAERSDKDSSSAYNTA
ESCRSTPLTVDRSPDSSLQRIISITNRKNLRSTIVTNHLSSGLSSIENTPSKSKTNERIL
STEYQGNTLDCSAFLDHRKNSTEEIPYLSPYHSSAYRHGNIPVHARHYQSYMQLIQQKSA
VEYAQSQINLVTMCKESQRSMEPRMEWKVKIRSDGTRYITKRPVRDKLLKERALKIKEER
SGMTTDDDTMSEMKMGRYWSKEERKQHLMRAKEQRRRREFMMRSRLECLKESPQSGSESR
KEVSIIELSHKKMMKKRNKKILDNWMTIQELMTHGEKSPDGARVHNAFLSVTTV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttccagaagagagaggagcactacaaactgctatatgaa
gtttcacaggttaatgggaaggatcttttaaaagctactcatgaagaagcagttgaagcc
tttcgtaatgctaaagacccaattgtagttcaagtattaagacgaacgccggttaacaga
gctcatggaagttcccaggaggtacagcttgtaaatgtgagcactcaaacagacataaca
ttcgagcatatcatggccctcgctaaacttagaccatctactccaccagttccagatatt
tgcccttttcttctatctgacagctgccattctcttcatccagtggagcatgaattttac
gacggtaatgagtatctttccagccttcctgctgatggagacagaacggaagactttgag
tatgaggaaattgaactatgtcgcctaaataatcaggagagactgggtctaacagtctgc
tacaggacagatgatgaagaggatacgggaatatatgttagtgaggttgatccagacagc
attgcagccagggatggacgcattagagaaggagacaggatcttgcagataaatggccaa
gatattcagaacagagaggaggcagtggctttgctttccaatgatgaatgccagaaaatt
gttcttctggttgcaaggccagatttaccgctggatgaaggctggctcgatgatgaaagg
aatgaattcttggaagagttaaacatgcaaatactggaagaacaacgtcatgaggcaatg
caatacccagctgatgaagtgaaacagcaaaaaaagccagaagaggaagatggtacgact
gacacagcaacttcatcatccaataatcatgaaaaagacagtggtgtgggtcgcactgat
gaaagcctgcaccacgatgagagctcagagatggaaaatatagtcaggaatcacattact
cacctacagaaaaatgcaggcttaagacagagccaggatacgttaggtagcagtgaaata
cattgcaatgaaagtttgatttctggggaatacatagattctgatctcactgtcaatcaa
gaagaagattgtgacaggttccggcaattgctagagcttaagtgccaaatccgaaatcga
ggtgaatatgacctgtactactccagcagcacaattgaatgtagcagatcagagcatgga
gtagagcatgagttacaacttttgaatgaggagcttagaagtattgaacttgaatgccag
agtattatgcaggcacaccggcgaaaaaatgttaataatcagagtggagacatttgggaa
attcatgatgatgaattttgcaattataataccagcattgaagtacagagaagtaaagta
ggtatgagagaacatgcagagagatctgataaggacagttctagtgcttataatacagca
gaaagctgtagaagcacacctctgacagtagacagatccccggacagttctcttcaaaga
ataatcagtattacaaaccgtaaaaatcttagaagcacgattgttacaaaccatttatca
tctggactaagcagcattgagaataccccttccaaatctaaaaccaatgaaagaattctt
agcacagagtaccaaggaaatacattagactgcagtgcattcttagatcacagaaagaac
agcactgaggaaattccctatctttccccatatcacagttcagcatatagacatggaaat
atacctgtccatgcaagacattatcaaagttacatgcaactcatccaacagaaatcagct
gtggaatatgcacaaagtcaaataaatctagtaacaatgtgtaaagagtcacaaaggtca
atggaaccaaggatggaatggaaagtgaaaataaggagtgatggtacaagatacattact
aaaagaccagtaagggacaaacttcttaaagagcgtgccttaaaaatcaaggaggaaaga
agtggaatgaccacagatgatgatacaatgagtgagatgaagatgggacgttattggagt
aaggaggaacgaaagcagcaccttatgagagcaaaagaacaaaggcgaaggagggaattc
atgatgcgcagcagattggaatgtcttaaagaaagtccacagagtggcagtgagagcaga
aaagaagttagcatcattgaactgagtcataaaaaaatgatgaagaaacgtaacaaaaag
atactggataactggatgacaatccaagaacttatgacacatggagaaaagtcccctgat
ggagctcgagtacataatgcctttttatcagtcactactgtttga
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