Bufo gargarizans (Asiatic toad): 122926393
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Entry
122926393 CDS
T07965
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122926393 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
122926393 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122926393 (THOC3)
03041 Spliceosome [BR:
bgar03041
]
122926393 (THOC3)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122926393 (THOC3)
Spliceosome [BR:
bgar03041
]
Complex C
Other components
EJC/TREX
122926393 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122926393 (THOC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
DSE1_N
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_TEP1_C
eIF2A
RMC1_N
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Tricorn_2nd
WDR90_beta-prop_4th
TRM82_WD
PAC11
Beta-prop_WDR75_1st
ASA1
B-prop_COPA_B_2nd
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
PD40
Beta-prop_WDR41
Peptidase_S9_N
Cytochrom_D1
WD_LRWD1
CNH
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
122926393
NCBI-ProteinID:
XP_044133702
LinkDB
All DBs
Position
2
Genome browser
AA seq
318 aa
AA seq
DB search
MAAALQEHFKANSKTREFPAHTAKVHSVAWSCDGRRLASGSFDKTACVFLLEKDRLIREN
NYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRSERCITTVTTKGENINICWSPDG
QTIAVGNKDDVVTFIDVKTHRPRAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPE
LKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDIEELVCVRCFSRLDWPVRTLS
FSYDGKMLASASEDHFIDIAHVETGEKLCEVQCESPTFTVAWHPKRYLLAFACDDKDGKY
DSSREAGTVKLFGLPNDS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgctgcaggaacactttaaagcgaacagcaagacccgggagttccctgca
cacaccgctaaggtgcactcggtggcctggagctgtgatggaagacgcctggcatctggc
tccttcgataagacggcctgtgtgtttttgctggagaaggaccggctgataagagagaat
aattatcgtggtcatggcgatagcgtcgatcaactctgctggcatcctacaaacccagac
ctctttgtcactgcatcaggtgacaagactatacgtatatgggatgttagatctgagagg
tgcattactactgtcaccacaaaaggtgaaaatataaatatctgctggagcccagacggt
cagaccattgcagtaggaaataaggacgatgttgtcacctttatagatgtaaaaacccat
cgccctagagcagaggagcagttcaagtttgaggtcaatgaaatctcctggaacaatgat
aataatatgttctttcttacgaatgggaatggctgcattaacattctgagttatccagag
ctcaagccaattcagtcgattaatgctcacccttcaaattgcatttgtataaagtttgac
ccgactggaaagtattttgcaactggcagcgcagacgcacttgtcagtctttgggacata
gaagagctggtgtgtgtgcgctgtttctccaggttagactggcctgtgaggacattaagc
ttcagttatgatggaaaaatgctggcatctgcttctgaagaccatttcattgacattgca
catgttgagacaggtgagaagttatgtgaagttcaatgtgaatcgcctacattcactgtg
gcctggcatcctaagagatatcttttggcatttgcctgtgacgataaggatggcaaatat
gacagtagtcgtgaagctggcactgtaaaattatttggtcttccaaatgactcttga
DBGET
integrated database retrieval system