Bufo gargarizans (Asiatic toad): 122927469
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Entry
122927469 CDS
T07965
Symbol
SPG11
Name
(RefSeq) LOW QUALITY PROTEIN: spatacsin
KO
K19026
spatacsin
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122927469 (SPG11)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122927469 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
122927469
NCBI-ProteinID:
XP_044135277
LinkDB
All DBs
Position
2:complement(103494099..103553301)
Genome browser
AA seq
2320 aa
AA seq
DB search
MELSVLLDPSITLQDWTELPLKVSLTRLKNLTLCSLLPDRSLCLTVFTSRTRACTQLDGP
FTQFLWEDENHNETALDQNPRVLILGQNNDICVYEVSTEDGQVTLATLCLCDEDTLRQLC
AENHVCVPSLFSVLLLSLHGDDIFILLSSSVFVHLCYSGKDQKPNLVSCFCLDLDPETTE
HISDACLRHEILFLLNTSGFIYVFDTLDGSLVADIELPSWADIDTAEKLKSIRVSSNLDL
IVVSSERSCFLALRLSENLRENINLALQKWRNERHSKISFFKETQRHDFQMDRSWDATLL
SLLYKTKSSPGFPVCHQTASLQLRNSSSGAAFRWTVVGGGWVKVLKDNIEDPLSLHIWSV
TSYSVLFYVLQRDGYTTLIHWDMDTPGVNYHALGKALCVYSPDDEAPLVITDRGLSLVLF
SVTQNEFLTRLMIHGSASTADTLCHLNNWGRCSVPIHTLEAGLDNRQLDTVDFFLKSKES
ILSSLTSEDGAIHSEVYLCNVQDLVPALDLLSSYIRGTDQEAQSKHFSEQLLQLTLRFLN
AQLLTLCNLQSEPDPGLEQCVGILTGYITKLRPFMKKFQQQQPPLPLMTPHAGRRHGAWE
NMTVENIISDAILTNCIPEAQTFLREQGHHLCSLTWLKREGLKLVYRCLLECSVSEACQL
LQNMGYSIWDELHRICLHTSDLGVRTLLVDLLQKEGLFSEQQQQAIHTVCKLEELYCNTC
RTSEEKKNVLNARPSWRICAKSQEVKKLQDALTAVRDEPETLLLHWAKDWDCETQESLLL
PWRKNTDMSAVAPKILWRHLTMWHNWTQVASWIESIGLPQEKGDIERPLWPLISPTVIDT
NTLCCSYMRQKILDELSRMNIFIPSEVEDFELLVERLAISGRLMELTTSKSPDVHNSFVV
LCVERGLQYMLYSYLDCHRLNPETCSALAKTTLHETYPWFGFLVHIRQVCDHTDADRMFQ
ASLSNAHMLMPGCQPSVNNMLLDGHTLLALATIMYAPGGIDGVLKQCEEPSLCQWNVDLP
LLKMALTPYPKLRAALFSQHPSNAGSPPDITLYHLLQALSPFHPAHFFTWQPTNSLAASD
TSSALPHCSCPKLVKDLSVVEQLDTFFYIRSGRPAIAFSFFLVHHLLKSKVPKQLIHQVA
EDVYSLALSCFHVPVVISSCVCFLELLGLSSYKLRVDVNVANIILRHSSSLQEESGHNFH
IKALAQRLSKLVENEVEAAKDLLLSLEDVVDATLQQADSPLPPHRLWVTVVQFCLLHDIP
MSTSYLRYCAQRQDWLQLLVHTNSPPQVFYVLDDLNPVLCSHISLALQDKVSSDCSLQRI
GSDTTWDSLHHVLLKCLSMEEPGQMLLKECMRWRVPLFSALAASTQDADPISCLCAWIVT
SVDAATYTEITQTMSDSVDHKWSLEDLVQIWDILLARADSGTLEKAFSIFMEDCPLRILL
EMYELCLHHKNYTQAEQKVMEFQGRMTSLQSTDCSPPAPIPVLWLHARASHLLQLLLLQS
LTPYELQKVLQFLCDSGSHNICEGMDIHKLNALYQILDGYPVVIRKQLIEDYSPAALQVE
CQRLLQTLLEGAHFALAHQVAELAELPTDNLVIEEVLQDQSLLREMGQWGCPQSRAQYWR
KCHVTFCSKQLSPVVASNFFQSQASHHAATGTLLLEQMEALAEQELLFTLAGHWLSLHEC
SSLRTLEELEQQIWKYRIERETLNRSGGSRLLSSLSGFTKFASEFSFSGLAALNSFQLLD
IFSLPPLHGDKNANSQVLCGLIDRLLDDSKVHEASRVCRYFQLSHRDVWIVLSCRALASG
EMTMHQLPPDIQNIITEGKDAQENTWNRRRRLQSSSSVDSTSSQTPTNPVVTYLEVLKDA
CSHGKTFCRQLLCMYELSQDLGCSFSEVSSRDPREVLVTLLSSFRPELCDRAQAVITSHG
LSPETVAHIVAEGSLKIWRTLNKEGGQSEVYNLSENRSNFLQLAKLCPDPTLVGLYLLDH
LETVPLTELHCVIEILISAHDCFSLTCHLEGIGRVLQACRNLTEMHLAPNQEYSLMVRLL
SGIGRYNDMVYVFDILHKNQHFEVLLRKQLDTKGGLQTALLEYIKRCHPGDSEKHNMTAL
CFSLHRDIGHNHEHAAKIQLRLIQSRPWEYWMSDQGELRSSIMKALTLLIDAAESYSKDS
CVRQSLRCARLTRLLTLQLHLLNNGHQTKLINLERENLMEPILALPRFYQAVIVTEAYDL
QPDWPDVLYSKVIVGGDFQYLEEFKQRQLLSGGVFEQLSNKCKLNPPGSTGLQNLKRVIS
YCEDINTRYKLAIENKFYDITDVLMRDSQTRCCLTDMLSR
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggaactaagtgttcttctggatccttctataactttacaagactggactgagctgcct
ctaaaggtgtccttgaccagactcaaaaacctgaccttatgtagccttctgccggacaga
agcctctgcctcactgtcttcacctctagaacaagggcttgtacacagctggatggaccc
ttcactcaatttctgtgggaagatgagaaccataatgagactgcactggaccagaaccca
cgtgtcttgattcttggtcagaacaatgatatatgtgtctatgaagtgtctactgaggat
gggcaggtgacattggctacgctctgtctctgtgatgaagacaccttgaggcagctctgt
gcagagaatcatgtttgtgttccttccttgttctcggttcttctcctgtctcttcatggt
gatgacatattcattttgctcagcagtagtgtctttgtacatctttgctactctggcaag
gaccagaagccaaaccttgtgtcttgtttctgtctggacctggacccggagactacagag
cacatctcagatgcatgtctcaggcatgaaatcctgtttcttctgaacacttcagggttc
atttatgtttttgacacccttgatggatcgttagtggctgacattgaacttccctcatgg
gctgacattgatacagcagaaaaactgaaaagtatacgcgtgtcttcaaacctagatctc
atcgttgtctcctctgaaagatcttgctttcttgccttgaggttaagtgaaaatctcaga
gagaacatcaatctggcactacagaaatggcgtaacgagcggcactcaaagatatcattc
tttaaggagactcaaaggcatgattttcaaatggacaggtcatgggatgccacattattg
tcactgctctacaagaccaagagcagcccaggctttcctgtgtgccaccagactgctagt
ttacagctaaggaattcgtcctctggagcagcgtttagatggacagtagttggaggaggt
tgggtgaaagtcctgaaagataatattgaggatcctttgagtcttcacatctggtctgtg
acctcctatagcgtgttgttctatgttctgcaaagagatgggtataccaccctgatacac
tgggacatggacacaccgggcgttaattaccatgctctggggaaagctttgtgtgtttat
tctccagatgatgaagctcctttggtgatcacagatcgaggtctttctcttgtccttttt
tcggtgacacaaaatgagttcctgacccggttaatgattcatggcagtgccagtactgcg
gatactctgtgccacctaaataattgggggcgctgttctgtacccattcacacactggag
gccggcttggacaacaggcagttggatacagttgactttttcctaaagagtaaagaaagt
atcctgagctctttaacctctgaggacggtgccattcattctgaggtctacctctgcaat
gtgcaggatcttgttccagctctggatctcctctcctcttacatccgtggcacagatcag
gaggctcaaagtaaacacttctccgagcaactcttgcagctcacgctccgcttcctcaat
gctcagttgctgacactctgcaatttgcagtctgagccagaccctggcttagaacaatgt
gtgggaatattgactggttacattactaagcttcgacctttcatgaagaagtttcagcag
cagcagccaccgcttcctttgatgaccccacatgctgggagaagacatggagcgtgggag
aacatgactgtggagaatataatttcagatgccatcctgacaaactgcatccctgaagcc
caaaccttcttgcgagaacagggacatcacctatgtagcttgacttggttaaaaagagaa
ggcctgaaactggtttacagatgtctactagagtgctctgtatcagaggcctgccagctt
ctccagaacatgggctattccatatgggatgaacttcatcgtatatgtctgcacacttca
gatctcggagtacggacactattggttgacctgctgcagaaagaaggacttttctcagaa
cagcaacaacaagcgatccatacggtatgcaaacttgaggaactgtattgtaacacgtgc
cggaccagcgaggagaagaaaaatgtgcttaacgctagaccttcatggagaatctgtgct
aagtctcaggaggtgaagaaattgcaagatgcactgactgctgtaagagatgagccagag
acgttacttcttcattgggctaaggactgggactgtgagacacaagagtcacttttgctg
ccttggaggaaaaacacagacatgtctgctgtcgcacccaaaatcctttggcgccacttg
actatgtggcataattggacacaggttgcctcttggattgaaagcataggactgccccag
gaaaagggagatatagagcgccccctctggcctctcatcagtccaacagtcattgatacg
aataccttatgttgcagctacatgaggcagaaaatactggatgagttatcaaggatgaac
atttttattccctctgaagtggaagattttgagcttcttgtggaacgcttggccattagt
gggagactgatggaactgactacttcaaagagtccagatgttcataacagctttgtagtc
ttatgtgttgagcgtggactccagtacatgctgtacagttatctagattgtcacagattg
aatccagaaacgtgctctgctttggccaagacaaccttacatgagacgtacccatggttt
gggttcttggtgcatattcgacaagtttgtgaccatacagatgctgatcggatgttccag
gccagcctgtccaatgcccatatgctgatgcctggttgccagccaagtgtaaacaatatg
ctcctggatgggcatactctccttgctcttgcgacaatcatgtatgctcctggaggaatt
gatggggtattgaagcagtgtgaggagccaagcctttgccaatggaatgtagaccttcca
ttattaaagatggcactgaccccctaccccaagctcagagcagctctcttctcacagcac
ccgtccaacgctggatcacctcctgacattactctttaccatcttctgcaggccctttca
cccttccatcctgcgcatttcttcacatggcagccaacaaattctctggcagcaagtgac
accagttctgcgcttccacactgctcctgtcctaaactggtgaaagatctgtcagtagtg
gagcagctggatacattcttctatatacgtagtggccggccagccattgccttttccttt
tttctggtgcatcatcttctgaaaagcaaagttcccaagcagctaattcatcaggttgca
gaagatgtgtactcactagccttgtcgtgctttcatgtccccgttgtcatttcctcctgc
gtttgcttccttgagctacttggccttagtagctacaagcttcgtgtggatgtaaatgtg
gccaacatcatcctacggcacagttcatctctccaggaggagtcgggacacaatttccac
ataaaagcattagctcagaggctgtcaaaactagtggaaaatgaagtagaggctgcaaaa
gatcttttactaagcttagaagacgtggtggatgcaactttgcagcaggctgacagtcca
cttcctcctcaccgtctgtgggtcacagtggttcagttctgtctactccatgatattcct
atgagcaccagctatttgaggtactgtgcacagagacaagactggctgcagctgctggtg
cacacaaacagcccaccacaggtcttctatgtcttggatgatttgaatccagttctgtgt
agtcatatctccttggcgttacaagacaaagtctccagtgattgttccttgcaaagaatt
ggcagtgacacaacctgggatagtctccaccatgtgctgctgaaatgccttagtatggaa
gaaccaggacagatgcttctgaaggagtgtatgagatggagagtgccactattcagtgct
ctggctgcttctacacaggatgcagaccccatctcgtgtctatgtgcctggatcgtgact
tccgtggatgctgccacttatacagagatcacgcagacaatgtccgattctgttgatcat
aagtggagcctggaagatcttgtgcagatttgggatattctcctggcaagggcggatagc
ggcacactggagaaagccttcagcatatttatggaggactgccctttgcggatcctgctt
gaaatgtatgagctttgtctgcatcacaagaattacacacaggccgagcagaaagtaatg
gaattccagggcaggatgacgagtctccagtctacagattgctcgccccccgctccgatc
cctgtcttgtggcttcacgcccgggcgtctcatctactccagcttcttcttctccagagc
ctgactccatatgagctacagaaagttttgcagtttctttgtgatagcggcagccataac
atatgtgaaggaatggatattcacaaactgaatgccctctaccaaatcctggacggttat
cctgtggtcattaggaagcagcttatagaagactacagccccgccgcgctccaggtggaa
tgtcagagactgctgcagactctgctggaaggagcacacttcgctttggctcatcaagta
gctgaacttgcagaactgcccactgacaacctggttatagaagaggtgctacaagaccaa
agccttcttcgagagatggggcaatgggggtgcccacagagccgagcacagtattggcga
aagtgtcatgtgactttttgcagcaaacagctgtcccctgtagtggcatccaacttcttt
caatctcaagcctcccatcacgcagccactggcaccctcctattagagcagatggaggca
ctggcagaacaagagctgttgttcacacttgcagggcactggctctctcttcatgaatgc
tcttctctgaggacattagaagaattagaacagcagatctggaagtatcgcatcgagcga
gaaacactaaatagatctggtggatctcgcctactgtcctctctgtccggttttactaag
tttgcctcagaattttcattttctggtctggctgcgctcaactcttttcagcttctagac
atcttcagtcttcctccactacatggtgataaaaatgcaaactcccaggtactgtgtggt
ctgatagaccgtctactagatgacagtaaggtacatgaagccagccgtgtatgcaggtac
ttccagctctcccatcgtgatgtatggattgtgctgagctgccgggctctggcatctgga
gaaatgacaatgcatcaactgcctccagatatccagaatatcattactgagggcaaagac
gcacaggagaacacatggaaccggagaaggagattgcaaagttcatccagtgtggactcc
acatcttctcagacccccaccaaccctgttgtcacatatctggaggtcctgaaggatgct
tgttcacatggaaagactttctgcagacagctgctgtgtatgtatgagcttagtcaggat
cttggatgttccttctcagaagtatcatcccgagatccaagagaagttttggttaccttg
ctgtccagctttcgccctgagctttgtgacagagcacaagcagtcatcacttcacatgga
ctttcccctgagactgtagcccatattgttgctgaaggaagcctgaagatatggaggaca
ctaaacaaggaaggaggtcagtctgaggtatataacctctctgagaacagatccaacttc
cttcagcttgcaaagctgtgtcctgatccgactctggtggggttatatttactggatcat
ctagagactgttccacttactgagcttcattgtgtaattgaaatcctcatctctgctcat
gattgcttcagtctgacatgccacctagaagggatagggcgcgtcctccaagcatgtcgc
aacctgacggagatgcatttagctcccaaccaggaatatagcctcatggttagactcctg
tcagggattggtcgatataatgatatggtttatgtctttgatatcttacacaaaaaccag
cattttgaggttttgctaaggaaacagcttgatacgaagggcggattgcagactgcactt
ttggaatatattaagcgatgtcacccaggtgacagcgagaagcacaatatgactgcactc
tgcttcagtctacatcgggatattggccacaaccacgagcatgcagcaaaaatccagctc
agattgatccagtctaggccttgggaatattggatgtctgaccagggagagctgagatct
tctattatgaaggccctcactctgctgattgatgctgctgagagttattcaaaggattct
tgtgttcgtcagtcactacgatgtgcccgcctcacccgtcttttgaccctacaacttcat
ttgttgaacaatggccaccaaacgaagctgattaacctggaaagagagaacttgatggag
cccatattagcacttccaagattttaccaggctgttattgttactgaagcatatgatctg
cagccagactggccagacgtcttgtatagcaaagttattgttggaggcgattttcagtac
ctagaagagttcaagcagcgtcagcttctcagcggtggagtgttcgagcagttgtcaaac
aaatgcaaactgaaccctcctggatccactggactacagaacctgaagcgagtgatctct
tactgtgaggacatcaacacacgttataaactggctattgaaaacaaattctacgacatt
actgatgtgctgatgagagactcgcagacacgatgctgcttgacagatatgctgtctcga
taa
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integrated database retrieval system
