Bufo gargarizans (Asiatic toad): 122928363
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Entry
122928363 CDS
T07965
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122928363 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122928363 (TCOF1)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
90S particles
Other 90S particles
122928363 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
Motif
Other DBs
NCBI-GeneID:
122928363
NCBI-ProteinID:
XP_044137065
LinkDB
All DBs
Position
2:481073179..481229719
Genome browser
AA seq
1462 aa
AA seq
DB search
MRVTRSSELLALIYQHLLQNGYGKTARELQIESGETFISQTVSLQQIFRHWNMKDKKRKG
SNESDAPSKKPRLQDPVSSSESSDEEDNAHPKGADLVVQGKKDSVKKAGKLKTKSSTPKK
MNSAKKSASKGKGTTKTGAASLNLKPVAPETPVTLAKSSEDSDSEDETVPSKATPVLERP
LKSTPAKVLKSKTSLSTDSRAARHDKSVPAKTTTTKPLSSSNGKAIAKDDSSETSESSDE
TDIEKPPVTVTPNMTTQSVSKLKTKTPSTGTQPKADSSESSESESEEEPGLQTPTPAKFQ
VKAITPSPKTSAAQLKATKKNAITKAAPVAPASQSGSAVGKPPAKTMVDETSEDSDSDEE
LVPLTSIPTAPSSVQASKQKLQMQPTVPKPSADDSSTSSETESEEEPVRQKMPLPEVAAS
QDKVDPPVTVSQSKPAKSDCNDASADTVVAVVSENSASLGKTQSPAKAEVSETSDSSDSE
KEPENQKTTASPKKGVTPATQAKVSSGQASKPSTVVPAAAEGSESSDSSDSESEAPKKAA
NKFPGVNVRTPVPSTKRPVATSHLAKARTPLPAPVDDTSETEDSDSEEEPAAKKTASQLS
ASSLKTPSTSAKQPVTPSHAANAVAGKSRNLQKTTIADDSSETEDSDSEEDEGAKKTGSK
LPASSVKTPSTGRKQPVTLAAHTTGVKAASTPLPADDSSETEDSDSDESLPKAPPGIVIP
KQKPTAKSTAVTPASQASAAAVRTPAKTAADESSEDSDSDEEPSFSIKAPVPTIISPSVR
PSEASTARVPDSDADSESSDSEEKTPAVGTTKPSKPALAAKRKPGISATSQPNEESSSDD
SDSDSDTNEHAQSAIQTPKTKVASHNKTAATPSPAPLIATKEKTPASRKARVSQNPSTDT
SETIDSSDYDNPPPAQTLKGSFVPQTTVKRSLQPGTAVKGKKGSPVKAVTDTVKESSGSI
KKEQKTDVPALAKHKMSTAIPPLTSTPSGDTPSKGKAGLPMSQKAVRTAQALVKESSESE
SHGKVTEQVGTPAPKRNRSVAKTPKASKEKTVKAASRGKTSVALPAKVSSESSESSSSDE
KAAKATKQTPTVQTKLEKFFTKHSITPAKTKAKSTANLPMAFPTDSDETSDDEEKPVKEA
TPAPDTPKTSRGKHKERLDSSSLSTPKTKAKMSCLISSPKATNTDGKVSGDVPSKPAASG
EEGDSADNSEPEESQSLLQAKTPSNPLSTKHKQDKEDKTALANESIAHSSKKKHRVKTQP
STMSSLSSPATPGALLDSEEETVMALLEGRSPKKSRKNPSKKTVAATRVVASSTPTVQDS
NLLERSLPPPVPESPSSVHKGDKTLDAKSPGVTELSHLSAKKEKHGKKRKSSPEDGLSKQ
KDKKEKKAKKVKDTSITGEAASPKPSKKEKKSEKSEKKNDKKQKKNESKKLSQSLIAPVG
ESTDSGVSLQSKPKKKKKVKDD
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgacccgcagcagcgagctcctggctctcatttaccagcatctcctgcagaat
ggctacggcaagacagctagagagctgcagatagagagcggagagacgttcatttcacag
acggtgtctctccaacagatcttcaggcactggaacatgaaagacaagaagaggaagggc
agcaatgagagcgatgccccgagcaagaaaccacggttgcaggatcccgtcagctcttct
gaatcttccgatgaggaggataatgctcatccaaaaggagcagatctggtggtccaaggc
aaaaaggactctgtcaagaaggcaggcaagctcaaaacaaaatcttccacacccaagaaa
atgaattctgctaaaaagtcggcatcaaaggggaaaggcaccactaaaacaggagcagca
tccctaaatctcaagcctgtggctcctgagactcctgtaacactggcaaaaagcagcgaa
gattctgatagtgaggacgagaccgttccatcaaaagctactccggtacttgaaagacct
ttaaagtctaccccagcaaaagtcctaaagagcaagacttcattatctactgactctcgg
gcagcacggcatgacaagagcgtgcctgctaaaacgacaactacaaaacccctttcatcc
tccaatgggaaagccattgctaaagatgacagcagtgagacttctgagagcagcgatgaa
acagacattgagaaaccaccagtgactgtgactccaaacatgactactcaatctgtatcc
aagttaaaaacaaaaactccctctactgggacacaaccaaaggcagatagttcagagagt
agtgaatcagaaagtgaggaggagccaggattacagacgccaaccccagcgaagtttcag
gtgaaagccatcacaccatcacccaagacctcagcagcacagttgaaagccacaaagaag
aatgccataaccaaagctgcacctgtggccccagcctcccagagcggcagtgcagtagga
aaaccgcctgctaagacaatggtagatgagaccagtgaggactcggacagcgatgaagag
ttggtgccattgacttccatccctacagctccaagtagtgttcaggcatcaaagcaaaag
ttgcaaatgcagcccactgtgccaaagcctagcgcagatgacagttcaacaagtagcgag
acagaaagtgaagaggaacccgtaagacagaagatgccattgccagaagttgcagcttca
caagacaaagtagacccaccagtgactgtgtcacagagcaaaccagcaaagagcgactgt
aatgacgcaagtgcagatacagtcgttgctgttgtgtccgagaacagtgcttccctaggg
aaaacccagagccctgccaaggcagaagtgtctgagaccagtgattcctcagacagtgag
aaggaaccagagaaccagaagacaactgcatccccaaagaagggtgtgacccctgcgact
caggcaaaggtttctagtggccaggcttccaagccgagcacagttgtaccagcagcagct
gaggggtcagagagcagtgactcctctgacagcgagtcggaggcgcccaagaaagctgcc
aacaaattcccaggggtaaatgtgaggacaccggtccccagtacaaaacggcctgtagcg
acttcacatttagcaaaggccagaacccctctgcctgcccctgtagatgacacttctgaa
actgaagactctgatagtgaagaggagccggcggccaagaaaactgcaagtcagctttca
gcatccagtttgaaaacaccgtccaccagtgcaaaacaacccgtgacgccatctcacgcg
gcgaatgcagttgctggaaagtcaagaaacttacagaagacgacaattgcagatgattct
tcagaaacagaagactctgatagcgaggaggatgaaggggcaaagaaaactggcagtaaa
cttccagcatcaagtgtgaagacaccatccacagggcgcaaacagcctgtaacattggct
gcacatacaactggagttaaagcggcgtcaactccactgcctgcagatgacagctcagaa
acagaggattcagatagcgatgaatcgcttcctaaggcaccaccaggaattgtaatccca
aagcagaagcccactgctaaatctacagctgtgaccccggcgtcacaggccagtgctgca
gcagtgaggactcctgccaagacggcagctgatgagagcagcgaggactctgatagtgat
gaagagcctagcttttctataaaagctccagttccaacaataatcagtccatcggttaga
ccatctgaagcaagcactgcacgtgtcccagactctgatgctgactctgaaagcagcgac
tctgaagagaaaacgcctgctgtaggcactacaaaaccgagcaagccagcccttgctgcc
aaaaggaaaccaggaatttctgcaacttcacaaccaaatgaagaaagcagttcagatgac
agtgactctgactcggatacaaatgagcatgcacaatctgctatacaaacaccgaaaaca
aaagttgcatcacataataaaaccgcagcaaccccatcgccagcaccacttattgctacc
aaggagaagactcctgcatccaggaaagccagagtttcccaaaacccatcaactgacact
tctgaaaccattgactcctcagattatgacaatcctccgcctgctcagacattaaagggt
tccttcgtacctcaaacgacagtaaagcggtcactgcaacccggaactgcagtcaaaggc
aagaaaggcagtcctgtcaaggctgtaacagacaccgtgaaggagagctcgggcagcatc
aaaaaggagcaaaaaacagatgtacctgctttggcaaaacacaagatgtctacagctatt
cctccattgacgtccactccatctggagacaccccatccaagggtaaagcagggttgccc
atgagtcaaaaagcagtgaggacagcgcaagcgttggtcaaagagagcagtgaatctgag
agccatgggaaggtaactgaacaggttggaacaccagccccaaaaagaaaccgctctgta
gccaaaacaccaaaagcatccaaagagaaaactgtaaaggctgcaagtcgcggtaaaact
tctgttgcgctgcctgcaaaggtgtcaagcgagtcttccgaaagtagctcctcagacgag
aaggcagctaaggctacaaagcagacaccaaccgtgcaaactaaactggaaaagttcttc
acgaagcacagcattactccagcaaagaccaaggccaaaagcactgctaatctgcctatg
gcattccctacagactcggatgagacctcagacgatgaggagaagcccgtgaaggaagcg
acgcctgcaccagacacccctaaaacatcacgtggaaagcataaggagagactggactcg
tccagcctttcaactccaaagaccaaggcaaaaatgtcgtgtcttatatccagccccaag
gctacaaatactgatggcaaagtttcaggagatgttcccagtaaaccagccgcatctgga
gaagagggtgattctgcagataatagtgagccagaagaatctcagagtcttcttcaagca
aaaactccttcaaaccctttatcaacgaaacataagcaagacaaagaagataagactgct
ttggctaatgaaagtattgcacattcaagtaaaaagaagcacagagttaaaacccagcct
tcaacaatgtcctctctctcttctccagccaccccaggagctttgctggattctgaagag
gagactgttatggccttgttggaaggacggagtcccaaaaagtcaagaaaaaatccctct
aaaaagactgtagcggcaactcgggttgtagcatcttcaacaccaacagtacaagatagt
aatctccttgagaggagtctaccaccacctgtccctgagagtccaagctcggtacacaaa
ggggacaagactcttgatgcaaaatcccctggtgtcacagaactcagccatttgtctgca
aagaaagagaagcatggcaagaagcgcaagagttcccctgaggatgggctctccaaacag
aaggataagaaggagaagaaagctaagaaagtcaaagacaccagcataactggagaggct
gccagccctaaaccatccaaaaaggagaagaaatctgaaaagagcgagaaaaaaaatgat
aaaaaacaaaagaaaaacgaaagcaagaaactatcacaaagtctaattgctccagttgga
gagtcaacagattctggagtcagcctccagtcgaaacccaagaaaaagaagaaggtaaag
gatgactaa
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