Bufo gargarizans (Asiatic toad): 122928488
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Entry
122928488 CDS
T07965
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122928488 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122928488 (DCP1B)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122928488 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
122928488 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
SAM_EPH
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
122928488
NCBI-ProteinID:
XP_044137302
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All DBs
Position
2:518775902..518810941
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AA seq
541 aa
AA seq
DB search
MAAPGSGPLGRGLDISLAALRRHDPYIQGIVDVASQVALYTFSHKANEWEKTDVEGTLFV
YTRSASPNHGFTIMNRLSIENRTEPITKDLEFQLQDPFLLYRNARLLIYGIWFYSKEECQ
RIAELMKNLTQQEQLKAQQSAIVGVSPMDIHSDGKEVDILQMLSKAKNEYTKCKPCSEPK
MMTSSSAIHTNPNLIKPIAVKPSDTAPQGTTVHQDKLADPEPQHLSLTTLFGKTEKNTVE
NADQKDSPSVRQTVVRSLSYEEPPTWFTDSCDKQLCPAIQKLMVRGTDLHPVAEVPENQH
SYNGANIPPGDVFSSLFLSLEDPTPLSGQDHVCGGDYLLQKLQGQHSNIPPLDRGPPAIA
QCTSGKVIGSAPLNYYDPSQQNQRTPVSVAPAPLPSQPPLSTGAISPEEFLKKLNLVHQE
QQLQMNPKPALAAKFPVVTQGAPKPQWTEKSLGETNNPLLQVISPQRIPATVSPSLLLSP
AVFTQSSASDAIKTPHPAKEPASATANLLFPVSLQSTHSNQSSVLTKSQLQETLLQPHPE
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgggagcggcccgctcggccgaggtttggacatcagcctggcagctctc
agacggcatgacccgtacatccagggcattgtggacgtggccagccaggtggctctgtat
accttcagtcacaaggctaatgagtgggagaagactgacgtggaagggacactgtttgtg
tacacgagatctgcttctcctaaccatggcttcaccatcatgaaccggctgagcattgag
aaccgcactgagcccattactaaggacctggaatttcagctgcaagatccgttcctgctg
tacagaaatgccagacttcttatttatggaatctggttctacagtaaagaagaatgccaa
agaattgcagagctcatgaaaaatttaacccagcaggagcagctaaaggctcagcagtcg
gccattgtcggggtgtctcccatggacatacactcggatggtaaggaagtagacatcctg
cagatgctcagcaaggccaagaatgagtacactaagtgtaaaccatgttcagagcccaag
atgatgaccagttcctcagctatccacacaaaccccaacctcatcaaacccattgcagta
aaacccagtgacacagcccctcaggggacaactgtacatcaggacaagttggcagaccca
gagccccagcatttatccctcaccaccctgtttggaaaaacagaaaagaacactgttgaa
aatgcagatcagaaagattccccctcagtgcgccaaacagtggtgcgctccttatcttat
gaggagccaccaacatggttcacagacagctgtgataaacagctgtgtcctgcaatccag
aagctgatggtccgggggacagacctgcatcccgtcgctgaggtgccagaaaaccagcat
agttacaacggcgccaacattcctcctggagacgtctttagtagtctctttctatcgctg
gaagaccccacccctttatctggacaggatcatgtatgtggtggggactaccttctccag
aaactgcaaggtcaacactctaatatacctcctctggatcgaggacccccagccatcgca
cagtgtacatcagggaaagttatagggagcgcaccccttaattactatgacccctctcag
caaaaccaaaggactcctgtatccgtagccccagcacctctcccctcacagccgccactg
tccacaggggccatttctcctgaagaatttttgaaaaaattgaatctggtgcatcaggag
caacagttgcagatgaatcctaagcctgccctggctgccaaattcccagtcgttacccag
ggtgcaccgaaaccacagtggactgagaagtccctgggagagacaaacaatccactgctc
caggtaatatcaccccagagaatccctgccacagtgtccccatcgcttcttctgtctcct
gcggtgtttacacagagcagtgcaagtgatgccataaagacccctcatcctgctaaagaa
ccagcatctgctacggccaacctgcttttcccagtatcccttcagagcacacacagtaac
cagagcagtgtcctcaccaagagccagctccaggagaccttgttacagcctcatccagaa
cgatga
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