Bufo gargarizans (Asiatic toad): 122928845
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Entry
122928845 CDS
T07965
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bgar01001
]
122928845 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122928845 (TRIM28)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122928845 (TRIM28)
Protein kinases [BR:
bgar01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122928845 (TRIM28)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122928845 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
Bromodomain
zf-RING_2
zf-C3HC4
PHD_2
PDC10_C
DUF5366
YaaC
Motif
Other DBs
NCBI-GeneID:
122928845
NCBI-ProteinID:
XP_044138047
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All DBs
Position
2:complement(621590502..621621136)
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AA seq
789 aa
AA seq
DB search
MSATATREKRSTVTSAAAAATNNNGDNGNEEPATDGPELLENCGVCKSRLRAEREPQLLP
CLHTMCKTCLSAEPAEASPDPGSVAINCPVCKNQCYQRDIVENYFLREDSSADQVAETIQ
RCTSCEDNAIANSYCVECTEWLCETCVEAHQRVKYTKDHTVKVTSGSKKEAEHTVYCPVH
KQEPLLLFCDTCDTLTCRDCQLQGHKDHQYQFLEDAVKNQRKILSALVKRLGEKHVLLQK
STKEVHSSIRQVIDVQKKLQVDVKMAILQIMKELNKRGKLLVNDMQKVTEGQQDKLEKQH
WNMNKLQKHQEHILRFATWALESDNNTALLLSKKLIYFQLHRALKVVVDAVEPLGDLRFQ
WDADTWTKHAEFFGKIVSDKTGVVSSTATQSLNSSQVLTPLTNFNPMVQNRARPGGSQGR
AAAGGPGSFMQSMDDYDGTEGESSGLDALGGQKRGRSSEGGDVNELLKKVPRVSLERLDV
DLNPDTQPPVFKVFPGNTNEDYNLIVIERGNNGGEPVVKEEAMETGISIPTVESGEEKPY
VRPDGLPENVTPAVRPPSTTSDAAAEFQGSSTAAVSDAVTGACKVCQKEGALLSCNQCKS
TFHRDCHLPAIIENISGDWKCMLCLEISKDEQGEAASDDATSLSPIDQKKCERVLLELLC
HEPCRPFHRLSASGDGDPMIDLTLIRAKLQQKLSPFYASPDDFVCDVWMMFRNVSKFAED
KAVVQSIIELQAFFEARLSLLFGDRKFSCLLGEAGRDDEPHSESATQRSSPVSTTSDSVS
SVKNGAEQI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaccgcgacgcgcgaaaagaggagcacggtcacctccgccgccgccgcagcc
actaataacaacggagataacggcaacgaggagcctgctaccgatgggcccgagctgctg
gagaactgcggggtgtgtaagagccggctgagggcagagcgggagcctcagctgctgccc
tgcctgcacactatgtgtaagacgtgcctgagcgccgagcccgccgaggccagccctgac
cccggatccgttgcgattaactgccctgtctgcaagaatcagtgctatcagagggacatt
gtcgagaactattttcttagagaggattcttctgcagaccaagtagctgaaaccattcag
cggtgcaccagctgtgaggacaacgccatagctaatagttactgtgtggagtgcacagag
tggctttgcgaaacctgcgttgaggctcaccagcgtgtcaagtacacaaaagatcacact
gtcaaagtcacaagtggctctaagaaggaagctgaacatacagtgtactgcccagtccat
aagcaagaaccccttttgctcttctgtgatacctgtgacacattgacctgccgtgactgc
cagctgcagggacacaaggatcatcagtatcagtttttggaagatgctgtcaagaaccaa
cggaaaatactttctgctctagtgaagagattaggagaaaagcatgttcttctgcaaaag
tccacaaaggaagttcattcttcgattcgccaagtaatcgatgtacagaagaaattacaa
gtagatgtgaagatggcgatcttgcaaattatgaaggaacttaacaaacgtggcaaacta
cttgtaaatgatatgcagaaagtcacggaaggacagcaggataaattggagaaacagcac
tggaatatgaataaacttcagaagcaccaggaacacattctccgttttgccacctgggca
ttggagagtgataacaatacagccttgctgctttctaagaaattgatttatttccagctg
caccgtgctttgaaagtggttgtggatgctgtagagccactgggagacttaagattccag
tgggatgctgatacctggacaaagcatgcagagttttttggtaaaattgtctctgataaa
actggggttgtttcatcaactgcaactcagtcattgaactcgtctcaagtactgacgcca
ctcaccaactttaatccaatggtgcagaatagagcaagacctgggggttctcaaggcaga
gctgctgcaggtggccctgggagcttcatgcagtctatggatgactatgatggaacagag
ggtgaatcatctggtttagatgccttaggcggacagaaaaggggacgtagttcagagggt
ggtgatgtaaatgaattattgaagaaggttcctcgtgtgagtttagaacgtttggatgtg
gatcttaaccctgatactcagccgccagtctttaaagttttccccggaaacaccaatgaa
gactataatttaattgtgatcgagcgaggaaataatggtggagagcctgttgtaaaagag
gaagccatggaaacgggcatcagtattcccacagttgaatctggtgaggaaaaaccttac
gtgcggcctgacggtttgccagaaaatgtgactcctgcagttcgcccaccaagcaccacc
agtgatgctgctgctgaattccaaggctccagtacggctgcagtttcagatgctgtaact
ggtgcttgtaaggtgtgccaaaaggaaggagcgctgctttcatgcaaccagtgtaagagc
actttccaccgtgactgccatctgccagcgatcattgaaaatataagtggagattggaag
tgtatgctatgcctggaaatatccaaggatgagcaaggtgaagcggcttcagatgatgcc
accagcctctcccccatcgatcagaagaaatgtgagcgtgtgttgctagaactgctttgc
catgaaccttgtcggcccttccacagactatctgctagtggggatggagacccaatgatc
gacttgacactcatccgagccaagctacaacagaagttatcacctttttatgcctcccct
gatgactttgtgtgtgacgtctggatgatgtttaggaacgtcagcaagtttgcagaggat
aaagcggtggtccagtcgatcattgagcttcaggctttctttgaagcaaggctcagtctt
ctgtttggtgatcgcaaattttcatgcctcctgggagaagccggacgagatgacgaaccg
catagtgaaagtgcgactcaaagaagttcccctgtgagcacaaccagcgacagcgtatct
tctgttaaaaatggtgctgaacagatttaa
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