Bufo gargarizans (Asiatic toad): 122930274
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Entry
122930274 CDS
T07965
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122930274 (DDX20)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122930274 (DDX20)
Spliceosome [BR:
bgar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
122930274 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
Motif
Other DBs
NCBI-GeneID:
122930274
NCBI-ProteinID:
XP_044139455
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All DBs
Position
3:complement(447932653..447957527)
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AA seq
802 aa
AA seq
DB search
MRTGNGAVRTTVYCVDVLQASVRVSLLTGGMAAHALGSRPRTGDVLQGPGEASDFSSLLL
SRPVLEGLEAAGFTKPSPIQSKAIPLGRCGLDLIVQAKSGTGKTCVFSTVALDSLILENA
ATQILVLAPTREIAVQIHSVIISIGICLEGLECHVFIGGTPLPQDKVRLKKCHIAVGSPG
RIKQLIEIGYLDTSSIRLFILDEADKLLEEGSFQEQINWIYSSLPTNKQMLAVSATYPES
LAKALTKYMREPTFVRLNVTDPSLIGLKQYYKVVNSHPLPHKTFEEKVEHLLELFCRVPF
NQALVFSNLHSRAQHLSDVLTAKGFPAVCISGSMNQNQRLDAMAKLKQYHCRVLISTDLT
SRGIDAEKVNLVVNLDVPCDWETYMHRIGRAGRFGTYGLSVSYCCRGEEENLMMSIAQKC
NLQLLPLPEPIPDGLMDEACDWNVEIMSMKNTSQTVMSEVQVHESTKMQNTGINTLPEIS
SKNTKRTQPKQKKVAKKKTTERENPQEWLHMETSSLPKKPADNSKPKKTEGLGNDGKIQQ
GLDNSLPKIPSLSSFKHPVVCTSSFAELVEDYEQFIKEGLEKHVEVIRVYTGGHAERLSS
ENSIDMSSDAVNTPDQCNLSVDSSDESYSSSSSLSDCEDSSEVSRHSQEKVKTEERSSSC
PDLPAERTEGAAVCPVNVDDFPEPPEDVQQARLVKANSSVGKGVIIGNSKKVQKRGKKVT
QLSRRELCTEAQDDMYQLDYMNARAYPYGTMSYADYWRSYYQAWQHYHSTDPSSYYRNVY
KCSNWMSAYHMHSVYLHEMLKP
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaggactggaaacggagctgttcgtactactgtgtactgtgtggatgtgctccaagcc
tctgtaagggtttcccttttgaccggaggaatggccgcccacgcgttgggttctcgacct
cgcactggagatgttttgcagggccctggcgaggctagtgacttcagttctttgctcctg
tcccggccagttcttgagggcctagaggcagctggctttaccaaaccctctccaatacag
agcaaggctataccgcttggaaggtgcggtttagatttaatcgttcaggctaaatccggc
actggcaaaacttgtgtcttctccaccgtggcattagattctttgattctggaaaatgct
gcaacccagattttggtcttggctccaacaagagaaattgcagttcaaatccattcagtt
attatatctatagggatttgcttggaagggttggagtgccatgttttcataggagggact
ccgctgccacaagacaaagttcggctgaagaagtgtcacatagctgtcggctcgcctggc
cgaataaagcaattaatagaaattggctatctcgacacatccagcattcgtctatttatc
cttgatgaagcagacaaactactagaagaaggaagcttccaggagcagattaactggatt
tactcctctcttcccaccaacaagcaaatgttagccgtttcagccacatacccagaatcc
ctagctaaagcactgacaaagtatatgagggagccaacctttgtcaggttgaatgtaact
gaccccagccttatagggttaaagcagtattacaaggtggtgaattctcatcctcttcca
cacaaaacttttgaagagaaagttgagcacttgcttgaattgttctgtcgagttcccttc
aaccaagccttggtattttctaacttacatagcagggctcaacacctctctgatgttctc
acagccaaaggatttccagcagtgtgtatatctggcagtatgaaccaaaaccaaagactt
gatgctatggccaaactgaagcagtatcattgtcgtgtcctaatttccactgatctgaca
tcacgtggtattgatgctgagaaagtgaatttggttgtaaatctggatgtaccatgtgac
tgggagacatacatgcatcgaatcgggagagccggacgttttggtacctatggactttcc
gtctcttactgctgccggggagaagaagagaatttgatgatgtcaatagctcagaagtgc
aaccttcaactacttcctctacctgagccaattccagatgggctaatggacgaagcttgt
gactggaatgttgagatcatgtccatgaagaacacatctcaaactgtcatgtctgaagtc
caagtgcatgaatcaaccaaaatgcaaaatacaggcataaataccttaccagaaataagc
agcaaaaatactaaaagaactcaaccgaagcaaaagaaagttgccaaaaagaagactaca
gagagagaaaatccacaggaatggttgcacatggagacgtctagcttgcctaagaaacca
gctgataacagtaaacctaaaaagacagaaggcttggggaatgacggtaaaatccagcag
gggttggataattcccttcctaaaatcccaagtttatcttctttcaaacatcccgtggtg
tgcacatcatcctttgccgagctcgtcgaagattatgaacagtttatcaaggaaggctta
gagaaacacgtggaagtcatccgcgtttacacaggaggtcacgcagagagactctcttct
gaaaactcgatagacatgtcttcagatgctgtaaacaccccagatcaatgtaacctaagt
gtggactccagtgatgaaagttatagctcatccagctccttatcggattgtgaggacagt
agtgaggtatccagacattcgcaggagaaagtgaagaccgaggaacggtcaagttcctgc
ccagatcttcctgctgaaaggacagaaggggctgcagtgtgcccggtgaatgtggatgac
tttccagaacctccagaagacgtgcagcaggcacgcctggtcaaagcaaacagttctgtt
ggtaaaggtgtaattatcggtaattccaaaaaggttcagaaacggggtaaaaaagtaacc
cagctgtccagaagagaactgtgtacagaagctcaggatgacatgtaccagctggactat
atgaatgccagggcatatccttatggtaccatgagttacgctgactactggcgatcatat
tatcaagcatggcagcactaccattccactgacccaagctcttattacagaaacgtttac
aaatgctccaactggatgtccgcctaccacatgcactccgtgtacctccacgagatgctg
aagccttga
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