Bufo gargarizans (Asiatic toad): 122930451
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Entry
122930451 CDS
T07965
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122930451 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122930451 (PRPF8)
Spliceosome [BR:
bgar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122930451 (PRPF8)
Complex C
U5 SnRNP specific factors
122930451 (PRPF8)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
122930451
NCBI-ProteinID:
XP_044139807
LinkDB
All DBs
Position
3:complement(497579015..497605199)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRPGVPPMPGPPPVAPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDNEEDAPVMDWFYDHQPLRDNRKYVNGTTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSLEPLPEDDEEFELPEYVEPFLKDTPLYSDNTANGIALLWAPRPFNLRSGRTRR
AVDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWDTTEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFVVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDVATE
SAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
NQLPQHEYLKEMEPLGWVHTQPNESPQLSPQDVTTHAKVMADNPAWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYG
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggggtgtttccatacaggcctggggtacccccaatgcctggccccccaccagta
gcacccgattacatgtctgaagagaagttgcaggagaaagcccggaaatggcagcagcta
caggccaagcgttatgcagagaaaaggaaatttgggtttgtggatgcccagaaagaggac
atgcctccggaacatgttcgtaaaatcatccgtgaccatggagacatgaccaacagaaag
ttccggcatgataagagagtctatcttggagctttgaaatacatgcctcacgcagtgctg
aaattgctggaaaacatgcccatgccatgggagcagatcagagatgtgccagtgctgtat
cacattacaggagccatttcatttgtcaatgagattccttgggttattgagccggtctac
atatcacaatgggggtccatgtggattatgatgagaagagaaaagagggatagacggcac
ttcaaacgcatgaggtttcctccttttgatgatgaggaaccaccgctggattatgctgat
aacatcctcgatgtggagcctctggaagccattcaactagagctggacaatgaagaagat
gctcctgtcatggactggttctatgatcatcagccactacgggacaacagaaaatatgta
aatggtacaacataccagcgttggcagttcactcttccaatgatgtctacactgtaccgc
ctggccaatcaactgctcacagatctggtagatgataactacttctatctgtttgacttg
aaagctttcttcacctccaaggcacttaatatggcgattcctggtggtcccaaatttgag
cctttggttcgagacattaacttgcaggatgaagactggaatgaattcaatgacatcaat
aaaatcattattcgccagccgatccgcacagaatacaagattgcattcccttatctgtac
aacaatctgcctcatcacgtgcatttgacttggtaccacacaccaaacgtggtattcatt
aaaacagaggatcctgaccttccagccttctactttgatcccctcattaaccccatttca
cacagacactctgtaaagagcctagaacctttaccggaggatgacgaagagtttgagctc
cctgaatatgttgagcctttcctcaaagatacacctctatattcagacaacacggccaat
ggcattgcattactttgggctccccgtcctttcaatctccggtctggtagaacacggcgg
gctgttgacatcccacttgtaaagaactggtatcgtgagcattgtcctgccggccagcca
gtgaaggttagagtgtcttaccaaaaacttctgaaatattacgtcctcaatgctctcaag
cacaggccacccaaagcgcagaagaagaggtatcttttccgttcattcaaagccacaaag
ttcttccagtccacgaaactagactgggtggaagtcggtctacaggtgtgtcggcagggc
tacaacatgttaaacctgttgatccacagaaaaaacctgaactatcttcatttggactac
aatttcaatttgaaacctgtgaaaaccctgaccacaaaggaacgtaagaagtctcggttt
ggcaacgcttttcatttgtgccgagaagttctacgtctgaccaaacttgttgtggacagc
catgtgcaatacaggttgggaaatgtggacgcattccagctgtcagatggtttgcagtac
atctttgcccatgttgggcagctcactggcatgtacagatacaagtataaactcatgaga
caaatccgaatgtgcaaagacttgaagcatctcatctactaccggtttaatacaggccct
gttggaaaaggacctggttgtggcttttgggcagcaggctggagagtctggctgttcttc
atgcgtggaatcacccctttgctggaaagatggcttggaaatctgctcgccaggcaattt
gagggtcgacactctaaaggagtagcaaaaactgtgactaaacaaagagtagagtctcac
tttgatctggaactcagagcagctgtcatgcatgacatcctggacatgatgccagaaggc
atcaagcagaacaaggctaggaccattttgcagcacttgagtgaagcttggagatgctgg
aaggcaaacattccttggaaagtgccaggtctacctacacccattgagaatatgattctg
cgttatgtgaaggctaaagctgactggtggacaaatactgctcattacaacagagagcgc
attcgccgtggtgcaactgtggacaaaacagtttgcaaaaagaatctgggcagattgaca
cgactttacctgaaggcagagcaagagaggcagcacaactacctgaaagatgggccgtac
attactgcagaagaggctgtagctgtgtacaccacaaccgtccactggctggagagcagg
aggttttctcctattccatttcctcctctctcatacaagcatgataccaaactgctcatc
ctggccttggagaggctaaaagaggcatacagtgtgaagtcccgtctcaatcagtcccaa
agagaagaactgggcttaattgaacaagcgtatgacaatcctcatgaagccttgtctagg
atcaagcgtcacttgcttactcaaagagccttcaaggaggtgggaatcgaattcatggat
ctttacagtcacttggttccagtttatgacgtggagccccttgagaagatcacagatgct
tacctggatcagtacctctggtatgaagctgacaaaaggcgtcttttccctccttggatc
aagcctgctgatacagagccacctccattgcttgtgtacaaatggtgccaaggcattaat
aacctgcaagatgtgtgggataccactgaaggagagtgcaatgtgatgctggaatcgcgg
tttgagaagatgtatgagaaaattgacttgacactgctgaatcgtctcctgcgtctgatt
gtggatcacaatattgctgattacatgactgcaaagaataacgtggtgatcaattacaaa
gacatgaatcacaccaactcctacggcataatccgtggtctgcaatttgcttcctttgtt
gtacaatactatggattggtgatggacctgttggttctgggattgcacagagccagtgag
atggctggtccacctcagatgccaaatgacttcctgagcttccaagacgtggccacagaa
tccgctcatcctatccgcttgtattgcagatacattgatcgcatccatatttttttccgg
ttttcagcagatgaggccagagatctcattcagagataccttactgagcatccggatccc
aataatgagaacattgtgggctacaataacaagaaatgttggccacgagatgccaggatg
cgtctcatgaagcatgatgtcaatcttggtcgtgctgttttctgggatatcaagaaccgt
ttgcctcgctctgtcacaactgtacaatgggaaaacagttttgtgtctgtgtacagcaaa
gacaatcctaacctgttgttcaacatgtgtggctttgaatgccgaattcttcccaagtgt
cgtacaagctatgaggaattcactcataaggatggggtctggaatttacagaatgaggtg
accaaagaacggactgcccagtgtttcttgcgggtggatgatgaatctatgcagagattc
cacaacagagtgcgtcagattctcatggcatcaggttcaacaacatttaccaagattgtg
aacaagtggaacaccgcattgattggtctgatgacttacttccgggaggccgtggtaaat
actcaggagctgctcgatcttttggtgaaatgtgagaacaaaattcaaaccagaattaag
attgggctgaactccaaaatgccaagtcggttcccacctgtggtcttctacactcccaag
gagcttggtggtttagggatgttgtctatgggacacgtgcttatcccacaatctgacctc
aggtggtcaaaacagacagatgttggaatcacccatttccgctctggtatgagtcatgaa
gaggatcagcttatccctaacttgtatcgctacatccagccatgggagagtgagtttatt
gattctcaaagagtttgggctgaatatgctctgaagaggcaggaagccattgctcagaac
aggcggcttaccctggaggacttggaggattcatgggataggggtatcccacgtatcaac
acacttttccagaaggacaggcacactttggcttatgacaaaggctggagagtccgtacg
gatttcaaacaataccaggtattgaaacagaatccattctggtggacacatcaaagacac
gatgggaaactctggaatctgaataactaccgcacagacatgatccaggcccttggagga
gtggaaggcatcctggaacatacattgtttaagggcacttacttcccgacttgggagggt
ctcttctgggaaaaagccagtggctttgaagagtcgatgaagtggaagaaactgaccaat
gcccagaggtctggtctgaatcagattcccaacagaagatttactttgtggtggtcaccc
acaatcaacagagccaatgtgtatgttggattccaggtgcaattggatttgactggcatt
ttcatgcatggcaaaattccaacactaaagatctcgttgattcagatattcagggcccac
ttgtggcagaagatccatgaaagcattgtcatggatctgtgtcaggtatttgatcaagag
cttgatgccctagaaattgaaactgttcagaaggaaaccatccaccccaggaagtcgtat
aagatgaattcatcttgtgcagatatcctgctctttgcttcctacaagtggaatgtgtct
cggccatctttgcttgccgattcaaaggatgtgatggacagcaccacaacacagaagtac
tggattgatatccagttgaggtggggagactatgactctcatgatattgagcgatatgct
cgtgccaagttcttggactacactacggataacatgagtatttacccatcacccactggt
gtcctgattgccatagacctggcctataacctccacagtgcctatggaaactggttccct
ggaggaaaacctctgatacagcaagctatggccaagatcatgaaagctaaccctgctttg
tatgtgctgcgtgagcgcatccgtaaaggactgcagttgtattcttcagagccaactgag
ccatatttgtcctcccagaactacggtgaactcttctccaatcagatcatctggtttgtg
gatgataccaatgtgtacagagtaaccattcacaagacctttgaaggcaacttgacaacc
aaacctatcaatggagcaattttcatctttaacccaaggacagggcagcttttcctgaag
attattcacacatctgtgtgggcaggacagaagcgattgggtcagctcgccaagtggaaa
actgcagaagaagttgctgctttgatccgttcactgcctgtagaggagcagcccaagcaa
attattgtcaccaggaagggcatgttggatcctcttgaggtacatttactggacttccct
aacattgtcatcaaaggatctgagctgcagttgcccttccaggcctgtctgaaagtggag
aagtttggagacctgatattgaaggccacagagccacaaatggttctcttcaatctctat
gatgattggctgaagacaatctcttcatacacggcattctctcggctcattttgatcctg
agagcactgcatgtgaataatgaccgtgcaaaggtgatcctaaagccagacaagactaca
attactgagcctcaccatatctggcccacactaactgatgaggaatggattaaggtagaa
gttcagctaaaggatctgatcttggcagactatggcaagaagaacaatgtaaatgtggcc
tctttaacacagtctgaaatcagagatatcatattgggtatggaaatatctgccccatcc
cagcagaggcaacagattgcagagattgagaagcagacaaaagaacaatctcagctcact
gcaactcagacgcgtacagtgaacaagcatggagatgaaatcatcacctctaccaccagc
aactatgagacccagaccttctcttctaagacagagtggcgtgtcagagcaatttctgct
gcaaaccttcaccttcgaaccaaccacatctatgtgtcatctgatgatatcaaggagact
ggttacacttacatcttgcccaagaacgtgttgaagaaattcatctgcatttctgacctg
cgagctcagattgctggctatctgtatggtgtgagcccgcctgataaccctcaagtgaag
gaaatccgctgcattgtgatggtgccacagtggggaactcaccagactgttcacttgcca
aatcaactgcctcaacatgagtatctaaaggaaatggaaccattaggatgggtgcacaca
caaccaaatgagtctcctcagctgtcaccacaagatgtcaccactcatgctaaagtcatg
gcagacaatccagcttgggatggagagaaaactataattataacctgcagcttcactcct
ggatcctgcaccttgaccgcttacaagcttacacccagtggttatgagtggggaaggcag
aacactgataaagggaacaatcctaaaggctatctaccttctcattatgaaagagtgcag
atgctgctgtctgatcgtttccttggcttcttcatggtaccagctcaggcatcttggaac
tacaactttatgggtgtcagacatgatcccaacatgaagtatgaactacaacttgctaac
cccaaggaattttatcatgaggttcatcgcccatcgcactttttgaacttcgccttgttg
caggaaggagaggtgtactctgctgaccgtgaagacttgtacggatag
DBGET
integrated database retrieval system
