Bufo gargarizans (Asiatic toad): 122930602
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Entry
122930602 CDS
T07965
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bgar03037
]
122930602 (IFT88)
Cilium and associated proteins [BR:
bgar03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122930602 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_16
TPR_6
TPR_8
ANAPC3
TPR_11
TPR_10
ARM_TT21_5th
TPR_9
TPR_Slam
TPR_17
ARM_TT21_4th
TPR-S
ARM_TT21
TPR_MalT
HAT_PRP39_C
ARM_TT21_N
HEAT_Nup120
TPR_15
ARM_TT21_C
DUF2225
ARM_TT21_2nd
RPN7
Consortin_N
MIT
Motif
Other DBs
NCBI-GeneID:
122930602
NCBI-ProteinID:
XP_044140030
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All DBs
Position
3:complement(87854307..87978468)
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AA seq
841 aa
AA seq
DB search
MASGAGFIHHTRKLTMRHVHLATEEDEEDLYSGYNDYNPTYDTEDLDNDVAFQQAVKTSH
GRRPPITAKVPGTAAVRALGTGFGPRVNLSSSMGRPMTGAVQDGAARPMTAVRAAGYTKA
SFRGSSFDPLGQSRGPAPPLEAKNEDTPEEKIRQLEKKVNELIEESCIANSSGDLKQALE
KAKEAGRKERVLVRQREQILSPENINLDLTYSVLLNLASQYSANEMYAEALNTYQVIVKN
KMFSHAGRLKVNMANIYLKQKNYSKAIKFYRMALDQIPGAHKEMRIKIMQNIGVTFVKTG
QYADAINSFEHIMSESPNLNAGFNLILCYFAVGDRDKMKKAFQKLIAAPLGIDDEEKYIS
PGDDPHTNLLIEAIKNDSLHQMERERKELAEKYIMTAAKLIAPVIETSFDVGYDWCVEVV
KTSQYVELANDLEINKALTFLKQKNFSQAVETLKMFEKKDSRVKSAAASNLSFLFFLEKD
FSQADLYADLAVTSDRYNPSALTNKGNSVFVSGDYEKAAEYYREALRNDSSCTESLYNLA
LTYKKQNRLEDALDCFTKLHAILRNSGQVVSQIANLYEMLDDPNQAIEWLLQLINIVPTD
AHALAKLGELYDTQGDKLEAFNFYCESYRHFPSNIEVIEWLGAYYIDKKFCEKAIKYFER
AALIQPTQVKWQLMLASCHRRSGNYQKSLDKYKEIHQRFPDNVECLRFLVRLCTDIGLKE
VQEYTTKLKKAEKMKELKEQRVKSGRDGSARSRREGREGSASSDSGQSSGTNSKGERLSA
KLKSLPTANDPYETSTNQEIADVSYADPLGPQMERPKTAAKRRVEEEEFADEELGDDLLP
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagccgggtttatacaccacaccaggaagctcacaatgcgacacgttcat
ctggcgactgaggaggatgaagaggatttatattctggttacaacgattacaatcccacc
tatgacactgaggatttagacaacgatgtggcttttcagcaggctgtcaagactagtcat
ggtcggagacccccgattacagccaaagtacctggaactgctgcagtacgggcactggga
accggatttggtcctagagtgaacctttcttcatccatgggaaggcctatgactggggct
gttcaggatggagcagctcgaccaatgacagctgtgcgtgcggctgggtacactaaagca
tcatttcgaggctcttcttttgatcccctgggtcagtctcgagggcctgctccacctctg
gaggccaagaatgaagacacgccagaagaaaagataagacagctggagaagaaggttaat
gaattaatagaagaaagttgcattgctaacagcagtggagatttgaagcaggccctggaa
aaggctaaggaagccgggaggaaggagagggttttggtcagacagagagaacagattctg
tccccggagaatattaacctggatctcacctactctgtcctgcttaacttggcatcccag
tattctgcaaatgaaatgtatgctgaagcgctcaatacttaccaagtcattgtgaagaat
aaaatgttcagtcacgcaggtcgcctaaaagtgaacatggcaaacatctatctaaagcag
aagaactactccaaggcgatcaagttttatcgtatggctcttgatcaaatcccaggtgcc
cacaaggagatgaggatcaagataatgcagaatatcggagtgaccttcgtcaagactggt
cagtacgccgacgctattaactcctttgagcacatcatgagtgaatctccaaatctgaac
gctggtttcaatttgatcctatgttactttgctgtcggagaccgagacaaaatgaaaaag
gctttccagaagttaatagcagcgcctcttggtattgacgatgaagaaaagtatatttct
cctggtgatgatcctcatacaaatttattgatagaagctattaaaaatgacagtctccat
caaatggaacgagaaaggaaagaattggctgaaaaatacattatgactgcggccaagttg
atagcacccgttattgaaacctcgtttgatgttggctatgactggtgtgtagaggttgtt
aagacgtcacaatatgtggaactggcgaatgatttggagattaacaaagctcttactttc
ctgaaacaaaagaacttttcccaggctgtagaaactttaaaaatgtttgagaaaaaagac
agcagagtaaaaagcgcggcagcatccaacctttcattccttttcttcctggaaaaagac
ttctcacaggctgatctgtatgcagatttagcggttacctctgatcgctacaatccatca
gccctgacaaataagggtaattcagtttttgtaagcggagactatgaaaaagcagccgaa
tactacagggaagctctgaggaacgactcgtcctgcacggaatcactctataaccttgct
ttgacgtacaagaaacaaaatcgcctggaggatgctctggattgttttactaaactccat
gcgatcctgaggaacagtggacaggttgtcagtcagatagcaaacttgtatgaaatgctt
gacgatcctaatcaggcgatcgagtggctcttacaacttataaacattgtaccgactgat
gcgcacgcacttgctaaacttggagaactgtacgatacgcagggcgacaagttagaagca
ttcaatttctactgtgagtcttatcgccacttcccatcaaacattgaagtgattgaatgg
ctgggagcctactacattgacaaaaagttttgtgaaaaagccattaagtactttgagaga
gctgcacttattcaaccaactcaagtgaaatggcaattaatgttggcaagctgtcacaga
agaagcggcaactatcagaaatcgctggataaatacaaggaaattcatcagaggttccca
gacaatgttgaatgcttgcgtttcctggtgcggctctgcacagatattgggttaaaagaa
gttcaagaatatacaacaaagttgaaaaaggctgagaaaatgaaggaattaaaggaacag
cgtgtaaaatctggcagagatggcagtgcccgcagtcgaagggagggcagagagggcagt
gcaagcagtgacagtgggcagagcagtggcaccaactctaaaggagaacgtcttagtgct
aaactaaaatcactcccaacagctaatgatccttatgagaccagcacgaaccaagaaatt
gcagatgtttcctatgcagaccctctcggcccacaaatggaaagaccaaaaactgcagcc
aagaggagagtggaagaggaagagtttgcagatgaagagttaggagatgaccttctccct
gaataa
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