Bufo gargarizans (Asiatic toad): 122932361
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Entry
122932361 CDS
T07965
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122932361 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgar04131
]
122932361 (TGFBRAP1)
Membrane trafficking [BR:
bgar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122932361 (TGFBRAP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
zf-RING_UBOX
TPR_Vps41
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
122932361
NCBI-ProteinID:
XP_044142665
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All DBs
Position
3:complement(218861437..218911714)
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AA seq
869 aa
AA seq
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MSVQAFRLVCASEKEHLPPGIQIECLECCGHDLYVGTNDGCIHHLLLVEENNTQVTGLTL
VQPSDHTSFTTTRQHSRQLGLKKPVCELRAASALGRLLVLCDNTITLLSSDSLEPVAGTK
IRGVLSFTLNENPVSGDPFSVEVCLISSKKRTVQIFSVGQERVQLVREVTTPEQPCALAA
DGHFLCLALSSRYVTLNYNTGHCQDLFPYPSEQKRPIIKRISRQEFLLAGPGGLGMFATV
AGISQRAPVRWSENVIGAAVSFPYVLALDEEFVTVHSMLDQQQKQSLPLKEGIILQDFEG
RVIVATSNGVYVLIPLPLEKQIQDLLSNQRVEEALVLAKGARHNIPKEKFQVMYRRILQQ
AGFIQFAQLQFLEAKELFRSSHLDIRELISLYPLLLPSSSSFIRAHPPLHEYADLNQLTR
GDQEKVGKCKCFLMSYLSEIRSTEVANGYQEDVDTALLKLYAEADHESLLDLLVSDNSCE
VSDGTAWLEKHKKYFALGLLYHYNKQDAAAVQVWVRIVDGEVEDNTRPDLFEYIVDFLTF
SKDQLLVWQYADWVLQKSEQVGVQIFTKRSLEEQLQNGFCPDKIVDHLCKYRKALLIYLE
HLVKEKNIQKEKYHTHLAVLYLEEILRLKSVESSDPTELEDLRQRFQKLLQQSDLYRVLL
LIDKIKGTDMHMERAILHGKLEEHDQALNILVHHLKDFAAAESYCMWNSQDRDASYRKRL
FQLLLSSYLTPSTPDNSLTVAAVDLLNNHPTEFDASSVLRLLPENWSVQLLSPFLAGAMR
EHVHALRTSQIALGLAKAENIIYKKEKLNMRDKPVILSEKKFCHVCRKPFQEPVFVRSPN
GHIVHTHCAASQRVNSSIDGHMSKPSKRT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcaggcgttcagactggtgtgcgcttccgagaaggagcatcttcccccaggg
atacagattgagtgtttggagtgctgtggacatgacctgtacgttggcactaatgacggc
tgcattcaccatctcctgctagtagaagaaaacaacacacaggtgactggcctcaccttg
gttcagccgtctgatcacactagcttcacaaccacccgacaacattctagacagttgggt
ttaaagaagccagtatgtgaactgagagcggcctcggccctggggcggttactagtgctg
tgtgataacaccatcactttgctgagcagtgactctctggagccagttgcaggaactaag
attcggggggtgctcagcttcaccctcaatgagaatccggtgagtggagaccccttcagt
gtggaggtttgtctgatctcttctaagaaacgcactgtacagatcttcagtgtgggtcag
gagcgggtacagctagtgcgggaagtcaccacaccagagcagccctgtgcactagcagca
gatggacattttctgtgcctggccctcagcagccgctatgttaccctgaactataatact
ggacattgccaggaccttttcccctatcctagtgagcagaagaggccgatcataaagagg
atcagcagacaggagtttcttctggctggacccggaggtttagggatgtttgccacagta
gcaggaatctctcagcgcgcaccagttcgttggtcagaaaatgtgattggcgcagcagta
tcttttccctatgtgttggctttggatgaggagtttgtcacagtgcacagcatgctggat
cagcagcagaagcaaagcctgccgctcaaggaaggtatcattctgcaggacttcgaaggt
agggtaatagtagcaaccagtaacggggtgtatgttttaatacccttgcctttggaaaag
cagatacaagaccttttatcaaaccagagagtcgaagaagctcttgtacttgccaaaggt
gcacggcataatattccaaaggagaaatttcaggttatgtatagaagaatcctgcaacag
gctgggtttatacagtttgctcagcttcagtttttagaagcaaaagaattattcagaagc
agtcatctcgatatccgggaactcatctctctctaccccctcctccttccatcttcctct
tcatttatccgtgcgcaccctccgctacatgaatatgctgatctcaatcagctgacacga
ggcgaccaggaaaaagttggaaagtgcaaatgttttctcatgtcctacttaagtgaaatc
cgcagcacagaagtggcaaatgggtaccaggaagatgtagatactgctttgctaaaactt
tatgctgaagcagatcatgagagcctcttggatctactggtctccgataattcctgtgag
gtgtcagatggcacagcctggttggagaagcacaaaaaatattttgcacttggtttactg
tatcactacaacaagcaagatgctgctgccgtgcaggtttgggtaagaattgtggatggt
gaggttgaagacaacactcggccagacctctttgagtatatagtggacttcctgacgttc
tccaaagaccagctactggtgtggcaatatgcagactgggttttgcagaaaagtgagcag
gttggagttcagatctttacaaaacggtcattagaagaacagttacaaaatggcttctgt
ccagataagattgtcgatcatctctgcaagtaccgcaaggctttacttatctacctggaa
catttagtcaaagaaaagaacattcagaaagaaaaataccacacacacctagctgtgctg
tatcttgaagaaatcctgcgtctgaagtctgtggagtcttcagacccgactgagctggaa
gatctgcgtcaaaggtttcagaaactgttacagcagtcagatttgtatcgggttctcttg
ctgatcgataaaatcaaaggcacggatatgcacatggagcgggcaatattacatgggaag
ctggaggaacacgaccaggctttaaatatcttagttcatcatttgaaagactttgctgca
gcggagagctattgtatgtggaactcacaagacagggatgcttcttatcgcaaaagactc
ttccagctcctcctttcctcctacctcacaccatccacgcctgacaattcactgaccgtg
gccgccgtagacttgttaaataaccaccctacagagtttgatgcatccagtgtgttgcgt
ctattaccagaaaactggtcagtgcagcttctttccccatttctagctggggccatgagg
gagcatgttcatgcattaagaacgtcccagatagcattaggactggcaaaagcggagaat
ataatttataagaaagagaagctcaatatgagggataagccagtaattctttcagaaaag
aaattttgccacgtgtgccggaagccattccaagaaccggtgtttgtcagaagccccaat
gggcatattgtccatacccactgtgctgcaagccagcgtgttaacagcagcattgacggc
catatgtccaagcctagtaaacgaacttga
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